RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 CCDC125Q86Z20 511 aa16.29■□□□□ 0.2
DNMT1-208ENST00000586667 USP16Q9Y5T5 823 aa16.29■□□□□ 0.2
DNMT1-208ENST00000586667 C4AP0C0L4 1744 aa16.28■□□□□ 0.2
DNMT1-208ENST00000586667 CNTNAP4Q9C0A0 1308 aa16.28■□□□□ 0.2
DNMT1-208ENST00000586667 EZH2Q15910 746 aaKnown RBP16.28■□□□□ 0.2
DNMT1-208ENST00000586667 LRP10Q7Z4F1 713 aa16.28■□□□□ 0.2
DNMT1-208ENST00000586667 NBPF26B4DH59 902 aa16.27■□□□□ 0.2
DNMT1-208ENST00000586667 PDIA6Q15084 440 aa16.27■□□□□ 0.2
DNMT1-208ENST00000586667 NBPF14Q5TI25 921 aa16.27■□□□□ 0.2
DNMT1-208ENST00000586667 NBPF10Q6P3W6 841 aaKnown RBP16.27■□□□□ 0.2
DNMT1-208ENST00000586667 AMIGO3Q86WK7 504 aa16.27■□□□□ 0.2
DNMT1-208ENST00000586667 NBPF15Q8N660 670 aa16.27■□□□□ 0.2
DNMT1-208ENST00000586667 QSER1Q2KHR3 1735 aa16.27■□□□□ 0.19
DNMT1-208ENST00000586667 CT47B1P0C2W7 299 aaPredicted RBP16.26■□□□□ 0.19
DNMT1-208ENST00000586667 BAG6P46379 1132 aa16.26■□□□□ 0.19
DNMT1-208ENST00000586667 PROSER3Q2NL68 480 aa16.26■□□□□ 0.19
DNMT1-208ENST00000586667 HDGFL1Q5TGJ6 251 aa16.26■□□□□ 0.19
DNMT1-208ENST00000586667 INTS5Q6P9B9 1019 aaKnown RBP16.26■□□□□ 0.19
DNMT1-208ENST00000586667 SCN7AQ01118 1682 aa16.26■□□□□ 0.19
DNMT1-208ENST00000586667 CRKLP46109 303 aaKnown RBP16.25■□□□□ 0.19
DNMT1-208ENST00000586667 ZNF827Q17R98 1081 aa16.25■□□□□ 0.19
DNMT1-208ENST00000586667 ANO8Q9HCE9 1232 aaPredicted RBP16.25■□□□□ 0.19
DNMT1-208ENST00000586667 ZBTB1Q9Y2K1 713 aa16.25■□□□□ 0.19
DNMT1-208ENST00000586667 BCORQ6W2J9 1755 aa16.25■□□□□ 0.19
DNMT1-208ENST00000586667 ERBB4Q15303 1308 aa16.24■□□□□ 0.19
DNMT1-208ENST00000586667 PIP4K2AP48426 406 aaPredicted RBP16.24■□□□□ 0.19
DNMT1-208ENST00000586667 SF3B2Q13435 895 aaKnown RBP16.24■□□□□ 0.19
DNMT1-208ENST00000586667 NECTIN2Q92692 538 aa16.24■□□□□ 0.19
DNMT1-208ENST00000586667 TEX13AQ9BXU3 409 aaPredicted RBP16.24■□□□□ 0.19
DNMT1-208ENST00000586667 CHPF2Q9P2E5 772 aa16.24■□□□□ 0.19
DNMT1-208ENST00000586667 A1BGP04217 495 aa16.23■□□□□ 0.19
DNMT1-208ENST00000586667 RARSP54136 660 aaKnown RBP16.23■□□□□ 0.19
DNMT1-208ENST00000586667 SSH1Q8WYL5 1049 aa16.23■□□□□ 0.19
DNMT1-208ENST00000586667 AKT1S1Q96B36 256 aa16.23■□□□□ 0.19
DNMT1-208ENST00000586667 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
DNMT1-208ENST00000586667 CACNA1FO60840 1977 aa16.23■□□□□ 0.19
DNMT1-208ENST00000586667 TCERG1O14776 1098 aaKnown RBP16.22■□□□□ 0.19
DNMT1-208ENST00000586667 STARD3NLO95772 234 aa16.22■□□□□ 0.19
DNMT1-208ENST00000586667 ANXA1P04083 346 aa16.22■□□□□ 0.19
DNMT1-208ENST00000586667 EIF2S2P20042 333 aaKnown RBP16.22■□□□□ 0.19
DNMT1-208ENST00000586667 ZNF428Q96B54 188 aa16.22■□□□□ 0.19
DNMT1-208ENST00000586667 RC3H1Q5TC82 1133 aaKnown RBP16.21■□□□□ 0.19
DNMT1-208ENST00000586667 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.19
DNMT1-208ENST00000586667 N4BP2Q86UW6 1770 aaPredicted RBP16.21■□□□□ 0.18
DNMT1-208ENST00000586667 ARFGEF2Q9Y6D5 1785 aa16.21■□□□□ 0.18
DNMT1-208ENST00000586667 ALDH1L2Q3SY69 923 aa16.2■□□□□ 0.18
DNMT1-208ENST00000586667 CCDC30Q5VVM6 783 aa16.2■□□□□ 0.18
DNMT1-208ENST00000586667 MRPL50Q8N5N7 158 aaKnown RBP16.2■□□□□ 0.18
DNMT1-208ENST00000586667 DDX21Q9NR30 783 aaKnown RBP eCLIP16.2■□□□□ 0.18
DNMT1-208ENST00000586667 COL15A1P39059 1388 aa16.2■□□□□ 0.18
DNMT1-208ENST00000586667 CASZ1Q86V15 1759 aa16.2■□□□□ 0.18
DNMT1-208ENST00000586667 EIF5P55010 431 aaKnown RBP16.19■□□□□ 0.18
DNMT1-208ENST00000586667 SMIM5Q71RC9 77 aa16.19■□□□□ 0.18
DNMT1-208ENST00000586667 G2E3Q7L622 706 aa16.19■□□□□ 0.18
DNMT1-208ENST00000586667 DBF4Q9UBU7 674 aaPredicted RBP16.19■□□□□ 0.18
DNMT1-208ENST00000586667 GNPATO15228 680 aa16.18■□□□□ 0.18
DNMT1-208ENST00000586667 BCAR3O75815 825 aa16.18■□□□□ 0.18
DNMT1-208ENST00000586667 IL6STP40189 918 aaPredicted RBP16.18■□□□□ 0.18
DNMT1-208ENST00000586667 BRPF1P55201 1214 aaPredicted RBP16.18■□□□□ 0.18
DNMT1-208ENST00000586667 RCAN3Q9UKA8 241 aa16.18■□□□□ 0.18
DNMT1-208ENST00000586667 RPS6KA4O75676 772 aa16.17■□□□□ 0.18
DNMT1-208ENST00000586667 MYL6BP14649 208 aa16.17■□□□□ 0.18
DNMT1-208ENST00000586667 CANXP27824 592 aaKnown RBP16.17■□□□□ 0.18
DNMT1-208ENST00000586667 SMC4Q9NTJ3 1288 aa16.17■□□□□ 0.18
DNMT1-208ENST00000586667 ADCY9O60503 1353 aa16.16■□□□□ 0.18
DNMT1-208ENST00000586667 SLC4A2P04920 1241 aa16.16■□□□□ 0.18
DNMT1-208ENST00000586667 AK7Q96M32 723 aa16.16■□□□□ 0.18
DNMT1-208ENST00000586667 PHAXQ9H814 394 aaKnown RBP16.16■□□□□ 0.18
DNMT1-208ENST00000586667 PNPLA7Q6ZV29 1317 aa16.16■□□□□ 0.18
DNMT1-208ENST00000586667 ANKRD36CQ5JPF3 1778 aa16.15■□□□□ 0.18
DNMT1-208ENST00000586667 FLIIQ13045 1269 aa16.15■□□□□ 0.18
DNMT1-208ENST00000586667 TTLL7Q6ZT98 887 aa16.15■□□□□ 0.18
DNMT1-208ENST00000586667 XAGE3Q8WTP9 111 aa16.15■□□□□ 0.18
DNMT1-208ENST00000586667 STK31Q9BXU1 1019 aa16.15■□□□□ 0.18
DNMT1-208ENST00000586667 HYPKQ9NX55 129 aa16.15■□□□□ 0.18
DNMT1-208ENST00000586667 COL24A1Q17RW2 1714 aa16.14■□□□□ 0.17
DNMT1-208ENST00000586667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.14■□□□□ 0.17
DNMT1-208ENST00000586667 SSFA2P28290 1259 aa16.14■□□□□ 0.17
DNMT1-208ENST00000586667 SLC15A2Q16348 729 aa16.14■□□□□ 0.17
DNMT1-208ENST00000586667 CHMP4AQ9BY43 222 aa16.14■□□□□ 0.17
DNMT1-208ENST00000586667 ADRA2BP18089 450 aa16.13■□□□□ 0.17
DNMT1-208ENST00000586667 RTCBQ9Y3I0 505 aaKnown RBP16.13■□□□□ 0.17
DNMT1-208ENST00000586667 PXDNLA1KZ92 1463 aa16.13■□□□□ 0.17
DNMT1-208ENST00000586667 RNF123Q5XPI4 1314 aa16.13■□□□□ 0.17
DNMT1-208ENST00000586667 KIF16BQ96L93 1317 aa16.13■□□□□ 0.17
DNMT1-208ENST00000586667 USP42Q9H9J4 1324 aaKnown RBP16.13■□□□□ 0.17
DNMT1-208ENST00000586667 NUP98P52948 1817 aa16.12■□□□□ 0.17
DNMT1-208ENST00000586667 SOCS7O14512 581 aa16.12■□□□□ 0.17
DNMT1-208ENST00000586667 PHF14O94880 888 aa16.12■□□□□ 0.17
DNMT1-208ENST00000586667 CAMTA2O94983 1202 aa16.12■□□□□ 0.17
DNMT1-208ENST00000586667 COPS6Q7L5N1 327 aa16.12■□□□□ 0.17
DNMT1-208ENST00000586667 TNNQ9UQP3 1299 aa16.12■□□□□ 0.17
DNMT1-208ENST00000586667 ARHGEF1Q92888 912 aaKnown RBP16.11■□□□□ 0.17
DNMT1-208ENST00000586667 BCL2L12Q9HB09 334 aa16.11■□□□□ 0.17
DNMT1-208ENST00000586667 STK32BQ9NY57 414 aa16.11■□□□□ 0.17
DNMT1-208ENST00000586667 ZNF330Q9Y3S2 320 aaPredicted RBP16.11■□□□□ 0.17
DNMT1-208ENST00000586667 PTPRCP08575 1304 aa16.11■□□□□ 0.17
DNMT1-208ENST00000586667 MAP3K15Q6ZN16 1313 aa16.11■□□□□ 0.17
DNMT1-208ENST00000586667 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
DNMT1-208ENST00000586667 HMGB2P26583 209 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms