RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.01
ACTN4-209ENST00000586538 NARFQ9UHQ1 456 aa14.96□□□□□ -0.01
ACTN4-209ENST00000586538 BTBD11A6QL63 1104 aa14.95□□□□□ -0.02
ACTN4-209ENST00000586538 IL17REQ8NFR9 667 aa14.95□□□□□ -0.02
ACTN4-209ENST00000586538 ZBTB1Q9Y2K1 713 aa14.95□□□□□ -0.02
ACTN4-209ENST00000586538 FKBP8Q14318 412 aa14.94□□□□□ -0.02
ACTN4-209ENST00000586538 USPL1Q5W0Q7 1092 aa14.94□□□□□ -0.02
ACTN4-209ENST00000586538 SRP68Q9UHB9 627 aaKnown RBP14.94□□□□□ -0.02
ACTN4-209ENST00000586538 BCS1LQ9Y276 419 aa14.94□□□□□ -0.02
ACTN4-209ENST00000586538 ZNF496Q96IT1 587 aaPredicted RBP14.93□□□□□ -0.02
ACTN4-209ENST00000586538 GPBP1L1Q9HC44 474 aaPredicted RBP14.93□□□□□ -0.02
ACTN4-209ENST00000586538 PIM2Q9P1W9 311 aa14.93□□□□□ -0.02
ACTN4-209ENST00000586538 N4BP2Q86UW6 1770 aaPredicted RBP14.93□□□□□ -0.02
ACTN4-209ENST00000586538 ATP10DQ9P241 1426 aa14.92□□□□□ -0.02
ACTN4-209ENST00000586538 KIAA1551Q9HCM1 1747 aa14.92□□□□□ -0.02
ACTN4-209ENST00000586538 POLRMTO00411 1230 aaKnown RBP14.92□□□□□ -0.02
ACTN4-209ENST00000586538 CANXP27824 592 aaKnown RBP14.92□□□□□ -0.02
ACTN4-209ENST00000586538 IL6STP40189 918 aaPredicted RBP14.92□□□□□ -0.02
ACTN4-209ENST00000586538 RALBP1Q15311 655 aa14.92□□□□□ -0.02
ACTN4-209ENST00000586538 PHACTR3Q96KR7 559 aa14.92□□□□□ -0.02
ACTN4-209ENST00000586538 MAPK8IP3Q9UPT6 1336 aa14.92□□□□□ -0.02
ACTN4-209ENST00000586538 ADCY9O60503 1353 aa14.91□□□□□ -0.02
ACTN4-209ENST00000586538 A0A0G2JLW4 131 aa14.91□□□□□ -0.02
ACTN4-209ENST00000586538 DPEP1P16444 411 aa14.91□□□□□ -0.02
ACTN4-209ENST00000586538 TM4SF1P30408 202 aa14.91□□□□□ -0.02
ACTN4-209ENST00000586538 EIF5P55010 431 aaKnown RBP14.91□□□□□ -0.02
ACTN4-209ENST00000586538 C1QTNF8P60827 252 aa14.91□□□□□ -0.02
ACTN4-209ENST00000586538 PNISRQ8TF01 805 aaKnown RBP14.91□□□□□ -0.02
ACTN4-209ENST00000586538 PDZRN3Q9UPQ7 1066 aa14.91□□□□□ -0.02
ACTN4-209ENST00000586538 DDR1Q08345 913 aa14.9□□□□□ -0.02
ACTN4-209ENST00000586538 DALRD3Q5D0E6 543 aaKnown RBP14.9□□□□□ -0.02
ACTN4-209ENST00000586538 WWC3Q9ULE0 1092 aa14.9□□□□□ -0.02
ACTN4-209ENST00000586538 BRCA1P38398 1863 aaKnown RBP14.9□□□□□ -0.02
ACTN4-209ENST00000586538 SCN7AQ01118 1682 aa14.9□□□□□ -0.02
ACTN4-209ENST00000586538 ARFGEF1Q9Y6D6 1849 aa14.89□□□□□ -0.03
ACTN4-209ENST00000586538 SNRPA1P09661 255 aaKnown RBP14.89□□□□□ -0.03
ACTN4-209ENST00000586538 ZNF330Q9Y3S2 320 aaPredicted RBP14.89□□□□□ -0.03
ACTN4-209ENST00000586538 CARMIL3Q8ND23 1372 aa14.88□□□□□ -0.03
ACTN4-209ENST00000586538 NFIXQ14938 502 aa14.88□□□□□ -0.03
ACTN4-209ENST00000586538 ZNF652Q9Y2D9 606 aa14.88□□□□□ -0.03
ACTN4-209ENST00000586538 NRXN2Q9P2S2 1712 aa14.88□□□□□ -0.03
ACTN4-209ENST00000586538 RGL2O15211 777 aa14.87□□□□□ -0.03
ACTN4-209ENST00000586538 NPHP1O15259 732 aa14.87□□□□□ -0.03
ACTN4-209ENST00000586538 SERPINB2P05120 415 aa14.87□□□□□ -0.03
ACTN4-209ENST00000586538 TAF7Q15545 349 aaPredicted RBP14.87□□□□□ -0.03
ACTN4-209ENST00000586538 ARHGAP27Q6ZUM4 889 aa14.87□□□□□ -0.03
ACTN4-209ENST00000586538 MCM10Q7L590 875 aa14.87□□□□□ -0.03
ACTN4-209ENST00000586538 AFDNP55196 1824 aaKnown RBP14.85□□□□□ -0.03
ACTN4-209ENST00000586538 SENP3-EIF4A1A0A087X0R7 540 aa14.85□□□□□ -0.03
ACTN4-209ENST00000586538 PDE6BP35913 854 aa14.85□□□□□ -0.03
ACTN4-209ENST00000586538 LMOD3Q0VAK6 560 aa14.85□□□□□ -0.03
ACTN4-209ENST00000586538 SETDB2Q96T68 719 aa14.85□□□□□ -0.03
ACTN4-209ENST00000586538 H0YIN7 160 aa14.84□□□□□ -0.03
ACTN4-209ENST00000586538 KCNA3P22001 575 aa14.84□□□□□ -0.03
ACTN4-209ENST00000586538 ST5P78524 1137 aa14.84□□□□□ -0.03
ACTN4-209ENST00000586538 NFE2L2Q16236 605 aa14.84□□□□□ -0.03
ACTN4-209ENST00000586538 CLEC4GQ6UXB4 293 aa14.84□□□□□ -0.03
ACTN4-209ENST00000586538 BICDL1Q6ZP65 573 aa14.84□□□□□ -0.03
ACTN4-209ENST00000586538 DZIP3Q86Y13 1208 aaKnown RBP14.84□□□□□ -0.03
ACTN4-209ENST00000586538 BCL2L12Q9HB09 334 aa14.84□□□□□ -0.03
ACTN4-209ENST00000586538 MYBBP1AQ9BQG0 1328 aaKnown RBP14.84□□□□□ -0.03
ACTN4-209ENST00000586538 LAMB4A4D0S4 1761 aa14.83□□□□□ -0.03
ACTN4-209ENST00000586538 BCORQ6W2J9 1755 aa14.83□□□□□ -0.03
ACTN4-209ENST00000586538 DLEC1Q9Y238 1755 aa14.83□□□□□ -0.03
ACTN4-209ENST00000586538 A1BGP04217 495 aa14.83□□□□□ -0.04
ACTN4-209ENST00000586538 TTLL6Q8N841 843 aa14.83□□□□□ -0.04
ACTN4-209ENST00000586538 TBC1D2BQ9UPU7 963 aa14.83□□□□□ -0.04
ACTN4-209ENST00000586538 ZC3H4Q9UPT8 1303 aaKnown RBP14.83□□□□□ -0.04
ACTN4-209ENST00000586538 DLG5Q8TDM6 1919 aa14.82□□□□□ -0.04
ACTN4-209ENST00000586538 CHRNA5P30532 468 aa14.82□□□□□ -0.04
ACTN4-209ENST00000586538 DCTN1Q14203 1278 aa14.82□□□□□ -0.04
ACTN4-209ENST00000586538 TBC1D9BQ66K14 1250 aa14.82□□□□□ -0.04
ACTN4-209ENST00000586538 CNBD1Q8NA66 436 aa14.82□□□□□ -0.04
ACTN4-209ENST00000586538 ZNF526Q8TF50 670 aaPredicted RBP14.82□□□□□ -0.04
ACTN4-209ENST00000586538 PLEKHF1Q96S99 279 aa14.82□□□□□ -0.04
ACTN4-209ENST00000586538 BRIP1Q9BX63 1249 aa14.82□□□□□ -0.04
ACTN4-209ENST00000586538 USP16Q9Y5T5 823 aa14.82□□□□□ -0.04
ACTN4-209ENST00000586538 KCNQ3O43525 872 aa14.81□□□□□ -0.04
ACTN4-209ENST00000586538 C2CD5Q86YS7 1000 aa14.81□□□□□ -0.04
ACTN4-209ENST00000586538 KDM3BQ7LBC6 1761 aa14.8□□□□□ -0.04
ACTN4-209ENST00000586538 CAMTA2O94983 1202 aa14.8□□□□□ -0.04
ACTN4-209ENST00000586538 DDX10Q13206 875 aaKnown RBP14.8□□□□□ -0.04
ACTN4-209ENST00000586538 WDR43Q15061 677 aaKnown RBP eCLIP14.8□□□□□ -0.04
ACTN4-209ENST00000586538 BABAM1Q9NWV8 329 aa14.8□□□□□ -0.04
ACTN4-209ENST00000586538 KDM2BQ8NHM5 1336 aa14.8□□□□□ -0.04
ACTN4-209ENST00000586538 SOGA3Q5TF21 947 aa14.79□□□□□ -0.04
ACTN4-209ENST00000586538 C9orf131Q5VYM1 1079 aa14.79□□□□□ -0.04
ACTN4-209ENST00000586538 ERBB4Q15303 1308 aa14.78□□□□□ -0.04
ACTN4-209ENST00000586538 PRR5LQ6MZQ0 368 aa14.78□□□□□ -0.04
ACTN4-209ENST00000586538 NBPF5PQ86XG9 351 aaPredicted RBP14.78□□□□□ -0.04
ACTN4-209ENST00000586538 CNKSR1Q969H4 720 aa14.78□□□□□ -0.04
ACTN4-209ENST00000586538 RNF181Q9P0P0 153 aa14.78□□□□□ -0.04
ACTN4-209ENST00000586538 RIPK4P57078 832 aa14.77□□□□□ -0.05
ACTN4-209ENST00000586538 TPTE2Q6XPS3 522 aa14.77□□□□□ -0.05
ACTN4-209ENST00000586538 KIF6Q6ZMV9 814 aa14.77□□□□□ -0.05
ACTN4-209ENST00000586538 C16orf71Q8IYS4 520 aaPredicted RBP14.77□□□□□ -0.05
ACTN4-209ENST00000586538 LMNB1P20700 586 aa14.76□□□□□ -0.05
ACTN4-209ENST00000586538 EIF4A1P60842 406 aaKnown RBP14.76□□□□□ -0.05
ACTN4-209ENST00000586538 ZNF622Q969S3 477 aaKnown RBP eCLIP14.76□□□□□ -0.05
ACTN4-209ENST00000586538 NYXQ9GZU5 481 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms