RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 TEX13AQ9BXU3 409 aaPredicted RBP17.02■□□□□ 0.32
DNMT1-205ENST00000585920 HEG1Q9ULI3 1381 aa17.02■□□□□ 0.31
DNMT1-205ENST00000585920 SNRPA1P09661 255 aaKnown RBP17.01■□□□□ 0.31
DNMT1-205ENST00000585920 DNAJC10Q8IXB1 793 aa17.01■□□□□ 0.31
DNMT1-205ENST00000585920 LINC00116Q8NCU8 138 aa17.01■□□□□ 0.31
DNMT1-205ENST00000585920 MBIPQ9NS73 344 aa17.01■□□□□ 0.31
DNMT1-205ENST00000585920 STARD3NLO95772 234 aa17■□□□□ 0.31
DNMT1-205ENST00000585920 RGPD3A6NKT7 1758 aaPredicted RBP17■□□□□ 0.31
DNMT1-205ENST00000585920 RGPD4Q7Z3J3 1758 aa17■□□□□ 0.31
DNMT1-205ENST00000585920 VIRMAQ69YN4 1812 aaKnown RBP16.99■□□□□ 0.31
DNMT1-205ENST00000585920 SLC15A2Q16348 729 aa16.99■□□□□ 0.31
DNMT1-205ENST00000585920 AK7Q96M32 723 aa16.99■□□□□ 0.31
DNMT1-205ENST00000585920 TFCP2L1Q9NZI6 479 aa16.99■□□□□ 0.31
DNMT1-205ENST00000585920 KCPQ6ZWJ8 1503 aa16.99■□□□□ 0.31
DNMT1-205ENST00000585920 SIPA1L3O60292 1781 aaPredicted RBP16.99■□□□□ 0.31
DNMT1-205ENST00000585920 GIGYF1O75420 1035 aaPredicted RBP16.98■□□□□ 0.31
DNMT1-205ENST00000585920 ECM2O94769 699 aaPredicted RBP16.98■□□□□ 0.31
DNMT1-205ENST00000585920 CYP19A1P11511 503 aaPredicted RBP16.98■□□□□ 0.31
DNMT1-205ENST00000585920 PLCB2Q00722 1185 aa16.98■□□□□ 0.31
DNMT1-205ENST00000585920 GOLGA2Q08379 1002 aa16.98■□□□□ 0.31
DNMT1-205ENST00000585920 RC3H1Q5TC82 1133 aaKnown RBP16.98■□□□□ 0.31
DNMT1-205ENST00000585920 AKT1S1Q96B36 256 aa16.98■□□□□ 0.31
DNMT1-205ENST00000585920 ANO8Q9HCE9 1232 aaPredicted RBP16.98■□□□□ 0.31
DNMT1-205ENST00000585920 LY75O60449 1722 aa16.98■□□□□ 0.31
DNMT1-205ENST00000585920 ZNF521Q96K83 1311 aa16.97■□□□□ 0.31
DNMT1-205ENST00000585920 R3HDM1Q15032 1099 aaKnown RBP16.97■□□□□ 0.31
DNMT1-205ENST00000585920 ZNF827Q17R98 1081 aa16.97■□□□□ 0.31
DNMT1-205ENST00000585920 TSR2Q969E8 191 aaKnown RBP16.97■□□□□ 0.31
DNMT1-205ENST00000585920 MYH16Q9H6N6 1097 aa16.97■□□□□ 0.31
DNMT1-205ENST00000585920 USP16Q9Y5T5 823 aa16.97■□□□□ 0.31
DNMT1-205ENST00000585920 PAPPAQ13219 1627 aa16.96■□□□□ 0.31
DNMT1-205ENST00000585920 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.31
DNMT1-205ENST00000585920 CRKLP46109 303 aaKnown RBP16.96■□□□□ 0.31
DNMT1-205ENST00000585920 CNTNAP4Q9C0A0 1308 aa16.96■□□□□ 0.3
DNMT1-205ENST00000585920 GNPATO15228 680 aa16.95■□□□□ 0.3
DNMT1-205ENST00000585920 CCDC87Q9NVE4 849 aa16.95■□□□□ 0.3
DNMT1-205ENST00000585920 RREB1Q92766 1687 aa16.94■□□□□ 0.3
DNMT1-205ENST00000585920 PSDA5PKW4 1024 aaPredicted RBP16.94■□□□□ 0.3
DNMT1-205ENST00000585920 E9PSI1 815 aa16.94■□□□□ 0.3
DNMT1-205ENST00000585920 ELL2O00472 640 aaPredicted RBP16.94■□□□□ 0.3
DNMT1-205ENST00000585920 KRT24Q2M2I5 525 aa16.94■□□□□ 0.3
DNMT1-205ENST00000585920 INTS5Q6P9B9 1019 aaKnown RBP16.94■□□□□ 0.3
DNMT1-205ENST00000585920 RTCBQ9Y3I0 505 aaKnown RBP16.94■□□□□ 0.3
DNMT1-205ENST00000585920 RPS6KA4O75676 772 aa16.93■□□□□ 0.3
DNMT1-205ENST00000585920 A1BGP04217 495 aa16.93■□□□□ 0.3
DNMT1-205ENST00000585920 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
DNMT1-205ENST00000585920 CANXP27824 592 aaKnown RBP16.93■□□□□ 0.3
DNMT1-205ENST00000585920 DUSP27Q5VZP5 1158 aa16.93■□□□□ 0.3
DNMT1-205ENST00000585920 FLAD1Q8NFF5 587 aa16.93■□□□□ 0.3
DNMT1-205ENST00000585920 FANCIQ9NVI1 1328 aa16.93■□□□□ 0.3
DNMT1-205ENST00000585920 PHF14O94880 888 aa16.92■□□□□ 0.3
DNMT1-205ENST00000585920 SLFN5Q08AF3 891 aa16.92■□□□□ 0.3
DNMT1-205ENST00000585920 TRAPPC3LQ5T215 181 aa16.92■□□□□ 0.3
DNMT1-205ENST00000585920 C8orf58Q8NAV2 365 aa16.92■□□□□ 0.3
DNMT1-205ENST00000585920 CDCA7LQ96GN5 454 aa16.92■□□□□ 0.3
DNMT1-205ENST00000585920 NUP188Q5SRE5 1749 aa16.92■□□□□ 0.3
DNMT1-205ENST00000585920 KDM3BQ7LBC6 1761 aa16.92■□□□□ 0.3
DNMT1-205ENST00000585920 UBR2Q8IWV8 1755 aa16.92■□□□□ 0.3
DNMT1-205ENST00000585920 ZNF831Q5JPB2 1677 aa16.91■□□□□ 0.3
DNMT1-205ENST00000585920 HOXB7P09629 217 aa16.91■□□□□ 0.3
DNMT1-205ENST00000585920 SSFA2P28290 1259 aa16.91■□□□□ 0.3
DNMT1-205ENST00000585920 NPM2Q86SE8 214 aaKnown RBP16.91■□□□□ 0.3
DNMT1-205ENST00000585920 CHMP4AQ9BY43 222 aa16.91■□□□□ 0.3
DNMT1-205ENST00000585920 ZBTB1Q9Y2K1 713 aa16.91■□□□□ 0.3
DNMT1-205ENST00000585920 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.9■□□□□ 0.3
DNMT1-205ENST00000585920 EXOSC9Q06265 439 aaKnown RBP16.9■□□□□ 0.3
DNMT1-205ENST00000585920 SMIM5Q71RC9 77 aa16.9■□□□□ 0.3
DNMT1-205ENST00000585920 NECTIN2Q92692 538 aa16.9■□□□□ 0.3
DNMT1-205ENST00000585920 ZNF330Q9Y3S2 320 aaPredicted RBP16.9■□□□□ 0.3
DNMT1-205ENST00000585920 C5P01031 1676 aa16.9■□□□□ 0.3
DNMT1-205ENST00000585920 PNPLA7Q6ZV29 1317 aa16.9■□□□□ 0.3
DNMT1-205ENST00000585920 TWISTNBQ3B726 338 aaPredicted RBP16.89■□□□□ 0.29
DNMT1-205ENST00000585920 HDGFL1Q5TGJ6 251 aa16.89■□□□□ 0.29
DNMT1-205ENST00000585920 COL23A1Q86Y22 540 aaPredicted RBP16.89■□□□□ 0.29
DNMT1-205ENST00000585920 TSPYL6Q8N831 410 aa16.89■□□□□ 0.29
DNMT1-205ENST00000585920 C4BP0C0L5 1744 aa16.89■□□□□ 0.29
DNMT1-205ENST00000585920 SOS1Q07889 1333 aaPredicted RBP16.89■□□□□ 0.29
DNMT1-205ENST00000585920 ZBED9Q6R2W3 1325 aa16.89■□□□□ 0.29
DNMT1-205ENST00000585920 TJP1Q07157 1748 aa16.88■□□□□ 0.29
DNMT1-205ENST00000585920 RFC4P35249 363 aa16.88■□□□□ 0.29
DNMT1-205ENST00000585920 IL6STP40189 918 aaPredicted RBP16.88■□□□□ 0.29
DNMT1-205ENST00000585920 PIP4K2AP48426 406 aaPredicted RBP16.88■□□□□ 0.29
DNMT1-205ENST00000585920 AMIGO3Q86WK7 504 aa16.88■□□□□ 0.29
DNMT1-205ENST00000585920 ARHGEF1Q92888 912 aaKnown RBP16.88■□□□□ 0.29
DNMT1-205ENST00000585920 ARXQ96QS3 562 aa16.88■□□□□ 0.29
DNMT1-205ENST00000585920 A0A087WZG4 1122 aa16.87■□□□□ 0.29
DNMT1-205ENST00000585920 NBPF26B4DH59 902 aa16.87■□□□□ 0.29
DNMT1-205ENST00000585920 EIF5P55010 431 aaKnown RBP16.87■□□□□ 0.29
DNMT1-205ENST00000585920 NBPF10Q6P3W6 841 aaKnown RBP16.87■□□□□ 0.29
DNMT1-205ENST00000585920 NBPF15Q8N660 670 aa16.87■□□□□ 0.29
DNMT1-205ENST00000585920 ERBB4Q15303 1308 aa16.87■□□□□ 0.29
DNMT1-205ENST00000585920 MYL6BP14649 208 aa16.86■□□□□ 0.29
DNMT1-205ENST00000585920 CCDC30Q5VVM6 783 aa16.86■□□□□ 0.29
DNMT1-205ENST00000585920 TRMT2AQ8IZ69 625 aaKnown RBP16.86■□□□□ 0.29
DNMT1-205ENST00000585920 YTHDC1Q96MU7 727 aaKnown RBP16.86■□□□□ 0.29
DNMT1-205ENST00000585920 PDGFDQ9GZP0 370 aaPredicted RBP16.86■□□□□ 0.29
DNMT1-205ENST00000585920 ZBTB47Q9UFB7 747 aaPredicted RBP16.86■□□□□ 0.29
DNMT1-205ENST00000585920 TAF1LQ8IZX4 1826 aa16.86■□□□□ 0.29
DNMT1-205ENST00000585920 CICQ96RK0 1608 aaPredicted RBP16.85■□□□□ 0.29
DNMT1-205ENST00000585920 SLC16A10Q8TF71 515 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms