RNA–Protein interactions for RNA: ENST00000585057.5

RUVBL1-208, Transcript of RuvB like AAA ATPase 1, human

TSL 3

Gene RUVBL1, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUVBL1-208	ENST00000585057	SENP3-EIF4A1	A0A087X0R7	540 aa		13.97	□□□□□ -0.17
RUVBL1-208	ENST00000585057	STARD3NL	O95772	234 aa		13.97	□□□□□ -0.17
RUVBL1-208	ENST00000585057	ADRA2B	P18089	450 aa		13.97	□□□□□ -0.17
RUVBL1-208	ENST00000585057	UBR2	Q8IWV8	1755 aa		13.96	□□□□□ -0.17
RUVBL1-208	ENST00000585057	APAF1	O14727	1248 aa		13.96	□□□□□ -0.17
RUVBL1-208	ENST00000585057	LMOD3	Q0VAK6	560 aa		13.96	□□□□□ -0.17
RUVBL1-208	ENST00000585057	PNISR	Q8TF01	805 aa	Known RBP	13.96	□□□□□ -0.17
RUVBL1-208	ENST00000585057	SYT17	Q9BSW7	474 aa		13.96	□□□□□ -0.17
RUVBL1-208	ENST00000585057	TRIM35	Q9UPQ4	493 aa		13.96	□□□□□ -0.17
RUVBL1-208	ENST00000585057	USP16	Q9Y5T5	823 aa		13.96	□□□□□ -0.17
RUVBL1-208	ENST00000585057	SOS1	Q07889	1333 aa	Predicted RBP	13.95	□□□□□ -0.18
RUVBL1-208	ENST00000585057	MYH14	Q7Z406	1995 aa	Known RBP	13.95	□□□□□ -0.18
RUVBL1-208	ENST00000585057	CIC	Q96RK0	1608 aa	Predicted RBP	13.95	□□□□□ -0.18
RUVBL1-208	ENST00000585057	A1BG	P04217	495 aa		13.95	□□□□□ -0.18
RUVBL1-208	ENST00000585057	SNRPA1	P09661	255 aa	Known RBP	13.95	□□□□□ -0.18
RUVBL1-208	ENST00000585057	GYS1	P13807	737 aa		13.95	□□□□□ -0.18
RUVBL1-208	ENST00000585057	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.95	□□□□□ -0.18
RUVBL1-208	ENST00000585057	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.95	□□□□□ -0.18
RUVBL1-208	ENST00000585057	DLG5	Q8TDM6	1919 aa		13.95	□□□□□ -0.18
RUVBL1-208	ENST00000585057	PIP4K2A	P48426	406 aa	Predicted RBP	13.94	□□□□□ -0.18
RUVBL1-208	ENST00000585057	TSPYL4	Q9UJ04	414 aa		13.94	□□□□□ -0.18
RUVBL1-208	ENST00000585057	USP42	Q9H9J4	1324 aa	Known RBP	13.93	□□□□□ -0.18
RUVBL1-208	ENST00000585057	MMP10	P09238	476 aa		13.93	□□□□□ -0.18
RUVBL1-208	ENST00000585057	EIF4A1	P60842	406 aa	Known RBP	13.93	□□□□□ -0.18
RUVBL1-208	ENST00000585057	NLGN1	Q8N2Q7	840 aa		13.93	□□□□□ -0.18
RUVBL1-208	ENST00000585057	LAS1L	Q9Y4W2	734 aa	Known RBP	13.93	□□□□□ -0.18
RUVBL1-208	ENST00000585057	COL15A1	P39059	1388 aa		13.93	□□□□□ -0.18
RUVBL1-208	ENST00000585057	ZPR1	O75312	459 aa		13.92	□□□□□ -0.18
RUVBL1-208	ENST00000585057	EIF5	P55010	431 aa	Known RBP	13.92	□□□□□ -0.18
RUVBL1-208	ENST00000585057	FKBP8	Q14318	412 aa		13.92	□□□□□ -0.18
RUVBL1-208	ENST00000585057	USPL1	Q5W0Q7	1092 aa		13.92	□□□□□ -0.18
RUVBL1-208	ENST00000585057	COL24A1	Q17RW2	1714 aa		13.91	□□□□□ -0.18
RUVBL1-208	ENST00000585057	GIGYF1	O75420	1035 aa	Predicted RBP	13.91	□□□□□ -0.18
RUVBL1-208	ENST00000585057	NLGN2	Q8NFZ4	835 aa		13.91	□□□□□ -0.18
RUVBL1-208	ENST00000585057	IL6ST	P40189	918 aa	Predicted RBP	13.9	□□□□□ -0.18
RUVBL1-208	ENST00000585057	FAM9B	Q8IZU0	186 aa		13.9	□□□□□ -0.18
RUVBL1-208	ENST00000585057	BCL2L12	Q9HB09	334 aa		13.9	□□□□□ -0.18
RUVBL1-208	ENST00000585057	NARF	Q9UHQ1	456 aa		13.9	□□□□□ -0.18
RUVBL1-208	ENST00000585057	TBC1D2B	Q9UPU7	963 aa		13.9	□□□□□ -0.18
RUVBL1-208	ENST00000585057	NBPF26	B4DH59	902 aa		13.89	□□□□□ -0.19
RUVBL1-208	ENST00000585057	CHL1	O00533	1208 aa		13.89	□□□□□ -0.19
RUVBL1-208	ENST00000585057	NBPF10	Q6P3W6	841 aa	Known RBP	13.89	□□□□□ -0.19
RUVBL1-208	ENST00000585057	NBPF15	Q8N660	670 aa		13.89	□□□□□ -0.19
RUVBL1-208	ENST00000585057	C4A	P0C0L4	1744 aa		13.88	□□□□□ -0.19
RUVBL1-208	ENST00000585057		A0A087WZG4	1122 aa		13.88	□□□□□ -0.19
RUVBL1-208	ENST00000585057	DDR1	Q08345	913 aa		13.88	□□□□□ -0.19
RUVBL1-208	ENST00000585057	KRT24	Q2M2I5	525 aa		13.88	□□□□□ -0.19
RUVBL1-208	ENST00000585057	NPM2	Q86SE8	214 aa	Known RBP	13.88	□□□□□ -0.19
RUVBL1-208	ENST00000585057	BABAM1	Q9NWV8	329 aa		13.88	□□□□□ -0.19
RUVBL1-208	ENST00000585057	PARP3	Q9Y6F1	533 aa		13.88	□□□□□ -0.19
RUVBL1-208	ENST00000585057	KDM3B	Q7LBC6	1761 aa		13.87	□□□□□ -0.19
RUVBL1-208	ENST00000585057	NGEF	Q8N5V2	710 aa		13.87	□□□□□ -0.19
RUVBL1-208	ENST00000585057	CD2AP	Q9Y5K6	639 aa		13.87	□□□□□ -0.19
RUVBL1-208	ENST00000585057	EIF2S2	P20042	333 aa	Known RBP	13.86	□□□□□ -0.19
RUVBL1-208	ENST00000585057	TM4SF1	P30408	202 aa		13.86	□□□□□ -0.19
RUVBL1-208	ENST00000585057	NFIX	Q14938	502 aa		13.86	□□□□□ -0.19
RUVBL1-208	ENST00000585057	BICDL1	Q6ZP65	573 aa		13.86	□□□□□ -0.19
RUVBL1-208	ENST00000585057	DZIP3	Q86Y13	1208 aa	Known RBP	13.86	□□□□□ -0.19
RUVBL1-208	ENST00000585057	PELP1	Q8IZL8	1130 aa	Known RBP	13.86	□□□□□ -0.19
RUVBL1-208	ENST00000585057	CFAP44	Q96MT7	982 aa		13.86	□□□□□ -0.19
RUVBL1-208	ENST00000585057	SALL2	Q9Y467	1007 aa	Predicted RBP	13.86	□□□□□ -0.19
RUVBL1-208	ENST00000585057	DCAF8L1	A6NGE4	600 aa		13.85	□□□□□ -0.19
RUVBL1-208	ENST00000585057	POLRMT	O00411	1230 aa	Known RBP	13.85	□□□□□ -0.19
RUVBL1-208	ENST00000585057	CAMTA2	O94983	1202 aa		13.85	□□□□□ -0.19
RUVBL1-208	ENST00000585057	MYL6B	P14649	208 aa		13.85	□□□□□ -0.19
RUVBL1-208	ENST00000585057	NECTIN2	Q92692	538 aa		13.85	□□□□□ -0.19
RUVBL1-208	ENST00000585057	MBIP	Q9NS73	344 aa		13.85	□□□□□ -0.19
RUVBL1-208	ENST00000585057	WWC3	Q9ULE0	1092 aa		13.85	□□□□□ -0.19
RUVBL1-208	ENST00000585057	ZNF853	P0CG23	659 aa		13.84	□□□□□ -0.19
RUVBL1-208	ENST00000585057	GPR162	Q16538	588 aa		13.84	□□□□□ -0.19
RUVBL1-208	ENST00000585057	TBC1D9B	Q66K14	1250 aa		13.84	□□□□□ -0.19
RUVBL1-208	ENST00000585057	GNAI1	P63096	354 aa		13.83	□□□□□ -0.2
RUVBL1-208	ENST00000585057	CALD1	Q05682	793 aa	Known RBP	13.83	□□□□□ -0.2
RUVBL1-208	ENST00000585057	WWC1	Q8IX03	1113 aa		13.83	□□□□□ -0.2
RUVBL1-208	ENST00000585057	IFT57	Q9NWB7	429 aa		13.83	□□□□□ -0.2
RUVBL1-208	ENST00000585057	ANXA1	P04083	346 aa		13.82	□□□□□ -0.2
RUVBL1-208	ENST00000585057	SERPINB2	P05120	415 aa		13.82	□□□□□ -0.2
RUVBL1-208	ENST00000585057	PDIA6	Q15084	440 aa		13.82	□□□□□ -0.2
RUVBL1-208	ENST00000585057	CCDC27	Q2M243	656 aa		13.82	□□□□□ -0.2
RUVBL1-208	ENST00000585057	PROSER3	Q2NL68	480 aa		13.82	□□□□□ -0.2
RUVBL1-208	ENST00000585057	C10orf71	Q711Q0	1435 aa		13.81	□□□□□ -0.2
RUVBL1-208	ENST00000585057		A0A0G2JLW4	131 aa		13.81	□□□□□ -0.2
RUVBL1-208	ENST00000585057	ELL2	O00472	640 aa	Predicted RBP	13.81	□□□□□ -0.2
RUVBL1-208	ENST00000585057	YBX3	P16989	372 aa	Known RBP eCLIP	13.81	□□□□□ -0.2	5e-7	■■□□□ 11.7
RUVBL1-208	ENST00000585057	HLF	Q16534	295 aa		13.81	□□□□□ -0.2
RUVBL1-208	ENST00000585057	TTLL7	Q6ZT98	887 aa		13.81	□□□□□ -0.2
RUVBL1-208	ENST00000585057	TSR2	Q969E8	191 aa	Known RBP	13.81	□□□□□ -0.2
RUVBL1-208	ENST00000585057	DUSP27	Q5VZP5	1158 aa		13.8	□□□□□ -0.2
RUVBL1-208	ENST00000585057	DIEXF	Q68CQ4	756 aa	Known RBP	13.8	□□□□□ -0.2
RUVBL1-208	ENST00000585057	CCDC24	Q8N4L8	307 aa		13.8	□□□□□ -0.2
RUVBL1-208	ENST00000585057	LAMB4	A4D0S4	1761 aa		13.8	□□□□□ -0.2
RUVBL1-208	ENST00000585057	DPEP1	P16444	411 aa		13.79	□□□□□ -0.2
RUVBL1-208	ENST00000585057	TGFB2	P61812	414 aa		13.79	□□□□□ -0.2
RUVBL1-208	ENST00000585057	HDGFL1	Q5TGJ6	251 aa		13.79	□□□□□ -0.2
RUVBL1-208	ENST00000585057	LRP10	Q7Z4F1	713 aa		13.79	□□□□□ -0.2
RUVBL1-208	ENST00000585057	C8orf58	Q8NAV2	365 aa		13.79	□□□□□ -0.2
RUVBL1-208	ENST00000585057	SETDB2	Q96T68	719 aa		13.79	□□□□□ -0.2
RUVBL1-208	ENST00000585057	ZBTB3	Q9H5J0	574 aa		13.79	□□□□□ -0.2
RUVBL1-208	ENST00000585057	ERBB4	Q15303	1308 aa		13.79	□□□□□ -0.2
RUVBL1-208	ENST00000585057	PXDNL	A1KZ92	1463 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms