RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 NLRP8Q86W28 1048 aa3.18□□□□□ -1.9
SMCHD1-211ENST00000584897 ATXN7L1Q9ULK2 861 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-211ENST00000584897 TSPOAP1O95153 1857 aa3.18□□□□□ -1.9
SMCHD1-211ENST00000584897 TEX14Q8IWB6 1497 aa3.18□□□□□ -1.9
SMCHD1-211ENST00000584897 IL27Q8NEV9 243 aa3.18□□□□□ -1.9
SMCHD1-211ENST00000584897 COL25A1Q9BXS0 654 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-211ENST00000584897 ZDHHC3Q9NYG2 299 aa3.18□□□□□ -1.9
SMCHD1-211ENST00000584897 BMP4P12644 408 aa3.18□□□□□ -1.9
SMCHD1-211ENST00000584897 BICDL1Q6ZP65 573 aa3.18□□□□□ -1.9
SMCHD1-211ENST00000584897 RRAGCQ9HB90 399 aa3.18□□□□□ -1.9
SMCHD1-211ENST00000584897 ADAMTS12P58397 1594 aa3.18□□□□□ -1.9
SMCHD1-211ENST00000584897 PER1O15534 1290 aaPredicted RBP3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 CACTIN-AS1Q8N1I8 211 aa3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 POLA1P09884 1462 aaPredicted RBP3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 PREX1Q8TCU6 1659 aa3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 LTBP4Q8N2S1 1624 aa3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 AQRO60306 1485 aaKnown RBP eCLIP3.17□□□□□ -1.92e-6■■■■■ 30.8
SMCHD1-211ENST00000584897 PTPRMP28827 1452 aa3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 INSM2Q96T92 566 aaPredicted RBP3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 ESYT1Q9BSJ8 1104 aa3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 DACH1Q9UI36 760 aa3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 STRCQ7RTU9 1775 aa3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 TOP2AP11388 1531 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 PROCA1Q8NCQ7 364 aaPredicted RBP3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 TTC16Q8NEE8 873 aa3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 MSTNO14793 375 aa3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 PDE4CQ08493 712 aa3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 TLR1Q15399 786 aa3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 LARP1Q6PKG0 1096 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 XAGE2Q96GT9 111 aa3.17□□□□□ -1.9
SMCHD1-211ENST00000584897 CFAP43Q8NDM7 1665 aa3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 KIF21BO75037 1637 aa3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 ERVK-9P63128 1117 aa3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 ZNF784Q8NCA9 323 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 MTMR7Q9Y216 660 aa3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 PCDHGC4Q9Y5F7 938 aa3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 ADAMTS2O95450 1211 aa3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 KLF16Q9BXK1 252 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 ADAMTS8Q9UP79 889 aa3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 A0A1W2PRU2 124 aa3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 RAC1P63000 192 aa3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 NBPF10Q6P3W6 841 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 PRICKLE2Q7Z3G6 844 aa3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 RBSNQ9H1K0 784 aa3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 ZNF395Q9H8N7 513 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-211ENST00000584897 GIGYF1O75420 1035 aaPredicted RBP3.15□□□□□ -1.9
SMCHD1-211ENST00000584897 RASSF7Q02833 373 aa3.15□□□□□ -1.9
SMCHD1-211ENST00000584897 GRIN2AQ12879 1464 aa3.15□□□□□ -1.9
SMCHD1-211ENST00000584897 CBLBQ13191 982 aa3.15□□□□□ -1.9
SMCHD1-211ENST00000584897 RNF217Q8TC41 542 aa3.15□□□□□ -1.9
SMCHD1-211ENST00000584897 EPRSP07814 1512 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-211ENST00000584897 UHRF1BP1LA0JNW5 1464 aa3.15□□□□□ -1.91
SMCHD1-211ENST00000584897 PTPRTO14522 1441 aa3.15□□□□□ -1.91
SMCHD1-211ENST00000584897 NR3C2P08235 984 aa3.15□□□□□ -1.91
SMCHD1-211ENST00000584897 OXLD1Q5BKU9 147 aa3.15□□□□□ -1.91
SMCHD1-211ENST00000584897 ARSJQ5FYB0 599 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-211ENST00000584897 ABL2P42684 1182 aa3.15□□□□□ -1.91
SMCHD1-211ENST00000584897 AGBL1Q96MI9 1066 aa3.15□□□□□ -1.91
SMCHD1-211ENST00000584897 GRIP2Q9C0E4 1043 aa3.15□□□□□ -1.91
SMCHD1-211ENST00000584897 CEP126Q9P2H0 1117 aa3.15□□□□□ -1.91
SMCHD1-211ENST00000584897 DNMT3LQ9UJW3 386 aa3.15□□□□□ -1.91
SMCHD1-211ENST00000584897 TTC37Q6PGP7 1564 aa3.15□□□□□ -1.91
SMCHD1-211ENST00000584897 RUSC2Q8N2Y8 1516 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 ZBTB7CA1YPR0 619 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 ARAFP10398 606 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 CENPCQ03188 943 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 MCM6Q14566 821 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 SLC51AQ86UW1 340 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 ZNF777Q9ULD5 760 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 PLB1Q6P1J6 1458 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 A6NJR5 290 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 CDK2AP1O14519 115 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 AIDAQ96BJ3 306 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 OXCT2Q9BYC2 517 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 C11orf16Q9NQ32 467 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 CABP1Q9NZU7 370 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 MAGI3Q5TCQ9 1506 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 IGF1RP08069 1367 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 ATXN7O15265 892 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 RPLP1P05386 114 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 IRS1P35568 1242 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 ZMYND15Q9H091 742 aa3.14□□□□□ -1.91
SMCHD1-211ENST00000584897 PCSK2P16519 638 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 POU4F2Q12837 409 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 TRIM28Q13263 835 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 FAM182BQ5T319 152 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 GIMAP7Q8NHV1 300 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 CNKSR1Q969H4 720 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 COL17A1Q9UMD9 1497 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 WIZO95785 1651 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 ARAP3Q8WWN8 1544 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 POTECB2RU33 542 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 SLURP2P0DP57 97 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 RHOQP17081 205 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 ADH6P28332 368 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 C1orf53Q5VUE5 145 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 MADDQ8WXG6 1647 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 GNB5O14775 395 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 FBXO45P0C2W1 286 aa3.13□□□□□ -1.91
SMCHD1-211ENST00000584897 SKIP12755 728 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms