RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 TEX13AQ9BXU3 409 aaPredicted RBP17.47■□□□□ 0.39
ERBB2-220ENST00000584684 ZBTB1Q9Y2K1 713 aa17.47■□□□□ 0.39
ERBB2-220ENST00000584684 BTBD11A6QL63 1104 aa17.46■□□□□ 0.39
ERBB2-220ENST00000584684 GPR162Q16538 588 aa17.46■□□□□ 0.39
ERBB2-220ENST00000584684 MCM10Q7L590 875 aa17.46■□□□□ 0.39
ERBB2-220ENST00000584684 LAMB4A4D0S4 1761 aa17.45■□□□□ 0.38
ERBB2-220ENST00000584684 PXDNLA1KZ92 1463 aa17.45■□□□□ 0.38
ERBB2-220ENST00000584684 NRXN2Q9P2S2 1712 aa17.44■□□□□ 0.38
ERBB2-220ENST00000584684 NFE2L2Q16236 605 aa17.44■□□□□ 0.38
ERBB2-220ENST00000584684 SRP68Q9UHB9 627 aaKnown RBP17.44■□□□□ 0.38
ERBB2-220ENST00000584684 MAPK8IP3Q9UPT6 1336 aa17.44■□□□□ 0.38
ERBB2-220ENST00000584684 BRCA1P38398 1863 aaKnown RBP17.44■□□□□ 0.38
ERBB2-220ENST00000584684 GRIN3BO60391 1043 aa17.43■□□□□ 0.38
ERBB2-220ENST00000584684 YBX3P16989 372 aaKnown RBP eCLIP17.43■□□□□ 0.38
ERBB2-220ENST00000584684 EIF5P55010 431 aaKnown RBP17.43■□□□□ 0.38
ERBB2-220ENST00000584684 FKBP8Q14318 412 aa17.43■□□□□ 0.38
ERBB2-220ENST00000584684 NARFQ9UHQ1 456 aa17.43■□□□□ 0.38
ERBB2-220ENST00000584684 BCORQ6W2J9 1755 aa17.43■□□□□ 0.38
ERBB2-220ENST00000584684 ZPR1O75312 459 aa17.42■□□□□ 0.38
ERBB2-220ENST00000584684 DCTN1Q14203 1278 aa17.42■□□□□ 0.38
ERBB2-220ENST00000584684 PRKRIP1Q9H875 184 aaPredicted RBP17.42■□□□□ 0.38
ERBB2-220ENST00000584684 PARP3Q9Y6F1 533 aa17.42■□□□□ 0.38
ERBB2-220ENST00000584684 N4BP2Q86UW6 1770 aaPredicted RBP17.41■□□□□ 0.38
ERBB2-220ENST00000584684 KCNQ3O43525 872 aa17.41■□□□□ 0.38
ERBB2-220ENST00000584684 TGFB2P61812 414 aa17.41■□□□□ 0.38
ERBB2-220ENST00000584684 TAF7Q15545 349 aaPredicted RBP17.41■□□□□ 0.38
ERBB2-220ENST00000584684 A0A087WZG4 1122 aa17.4■□□□□ 0.38
ERBB2-220ENST00000584684 TM4SF1P30408 202 aa17.4■□□□□ 0.38
ERBB2-220ENST00000584684 IL6STP40189 918 aaPredicted RBP17.4■□□□□ 0.38
ERBB2-220ENST00000584684 DDR1Q08345 913 aa17.4■□□□□ 0.38
ERBB2-220ENST00000584684 USPL1Q5W0Q7 1092 aa17.4■□□□□ 0.38
ERBB2-220ENST00000584684 PELP1Q8IZL8 1130 aaKnown RBP17.4■□□□□ 0.38
ERBB2-220ENST00000584684 PNISRQ8TF01 805 aaKnown RBP17.4■□□□□ 0.38
ERBB2-220ENST00000584684 AFDNP55196 1824 aaKnown RBP17.4■□□□□ 0.38
ERBB2-220ENST00000584684 POLRMTO00411 1230 aaKnown RBP17.39■□□□□ 0.37
ERBB2-220ENST00000584684 SNRPA1P09661 255 aaKnown RBP17.39■□□□□ 0.37
ERBB2-220ENST00000584684 CANXP27824 592 aaKnown RBP17.39■□□□□ 0.37
ERBB2-220ENST00000584684 BCL2L12Q9HB09 334 aa17.38■□□□□ 0.37
ERBB2-220ENST00000584684 DLEC1Q9Y238 1755 aa17.37■□□□□ 0.37
ERBB2-220ENST00000584684 ARFGEF1Q9Y6D6 1849 aa17.37■□□□□ 0.37
ERBB2-220ENST00000584684 LMOD3Q0VAK6 560 aa17.36■□□□□ 0.37
ERBB2-220ENST00000584684 NFIXQ14938 502 aa17.36■□□□□ 0.37
ERBB2-220ENST00000584684 RGL2O15211 777 aa17.35■□□□□ 0.37
ERBB2-220ENST00000584684 A1BGP04217 495 aa17.35■□□□□ 0.37
ERBB2-220ENST00000584684 WDR43Q15061 677 aaKnown RBP eCLIP17.35■□□□□ 0.37
ERBB2-220ENST00000584684 USP16Q9Y5T5 823 aa17.35■□□□□ 0.37
ERBB2-220ENST00000584684 TMPOP42166 694 aaKnown RBP17.34■□□□□ 0.37
ERBB2-220ENST00000584684 PRAMEF22A3QJZ6 481 aa17.33■□□□□ 0.36
ERBB2-220ENST00000584684 ZNF784Q8NCA9 323 aaPredicted RBP17.33■□□□□ 0.36
ERBB2-220ENST00000584684 RUNDC1Q96C34 613 aa17.33■□□□□ 0.36
ERBB2-220ENST00000584684 THUMPD2Q9BTF0 503 aaKnown RBP17.33■□□□□ 0.36
ERBB2-220ENST00000584684 BABAM1Q9NWV8 329 aa17.33■□□□□ 0.36
ERBB2-220ENST00000584684 ADCY9O60503 1353 aa17.32■□□□□ 0.36
ERBB2-220ENST00000584684 CARMIL3Q8ND23 1372 aa17.32■□□□□ 0.36
ERBB2-220ENST00000584684 CAMTA2O94983 1202 aa17.32■□□□□ 0.36
ERBB2-220ENST00000584684 DPEP1P16444 411 aa17.32■□□□□ 0.36
ERBB2-220ENST00000584684 RIPK4P57078 832 aa17.32■□□□□ 0.36
ERBB2-220ENST00000584684 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
ERBB2-220ENST00000584684 NPM2Q86SE8 214 aaKnown RBP17.32■□□□□ 0.36
ERBB2-220ENST00000584684 MIS18AQ9NYP9 233 aa17.32■□□□□ 0.36
ERBB2-220ENST00000584684 A0A0G2JLW4 131 aa17.31■□□□□ 0.36
ERBB2-220ENST00000584684 GIGYF1O75420 1035 aaPredicted RBP17.31■□□□□ 0.36
ERBB2-220ENST00000584684 KCNA3P22001 575 aa17.31■□□□□ 0.36
ERBB2-220ENST00000584684 TBC1D2BQ9UPU7 963 aa17.31■□□□□ 0.36
ERBB2-220ENST00000584684 ZNF330Q9Y3S2 320 aaPredicted RBP17.31■□□□□ 0.36
ERBB2-220ENST00000584684 ANKRD31Q8N7Z5 1873 aa17.31■□□□□ 0.36
ERBB2-220ENST00000584684 NBPF26B4DH59 902 aa17.3■□□□□ 0.36
ERBB2-220ENST00000584684 SERPINB2P05120 415 aa17.3■□□□□ 0.36
ERBB2-220ENST00000584684 NBPF10Q6P3W6 841 aaKnown RBP17.3■□□□□ 0.36
ERBB2-220ENST00000584684 DZIP3Q86Y13 1208 aaKnown RBP17.3■□□□□ 0.36
ERBB2-220ENST00000584684 NBPF15Q8N660 670 aa17.3■□□□□ 0.36
ERBB2-220ENST00000584684 ADAMTS8Q9UP79 889 aa17.3■□□□□ 0.36
ERBB2-220ENST00000584684 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
ERBB2-220ENST00000584684 TBC1D9BQ66K14 1250 aa17.29■□□□□ 0.36
ERBB2-220ENST00000584684 CLEC4GQ6UXB4 293 aa17.29■□□□□ 0.36
ERBB2-220ENST00000584684 CCDC146Q8IYE0 955 aa17.29■□□□□ 0.36
ERBB2-220ENST00000584684 ERBB4Q15303 1308 aa17.28■□□□□ 0.36
ERBB2-220ENST00000584684 PIM2Q9P1W9 311 aa17.28■□□□□ 0.36
ERBB2-220ENST00000584684 TSPYL4Q9UJ04 414 aa17.28■□□□□ 0.36
ERBB2-220ENST00000584684 COL11A2P13942 1736 aaPredicted RBP17.27■□□□□ 0.36
ERBB2-220ENST00000584684 PIP4K2AP48426 406 aaPredicted RBP17.27■□□□□ 0.36
ERBB2-220ENST00000584684 WWC3Q9ULE0 1092 aa17.27■□□□□ 0.36
ERBB2-220ENST00000584684 TRIM35Q9UPQ4 493 aa17.27■□□□□ 0.36
ERBB2-220ENST00000584684 BCS1LQ9Y276 419 aa17.27■□□□□ 0.36
ERBB2-220ENST00000584684 ZNF652Q9Y2D9 606 aa17.27■□□□□ 0.36
ERBB2-220ENST00000584684 RRP7AQ9Y3A4 280 aaKnown RBP17.26■□□□□ 0.35
ERBB2-220ENST00000584684 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
ERBB2-220ENST00000584684 CHRNA5P30532 468 aa17.25■□□□□ 0.35
ERBB2-220ENST00000584684 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
ERBB2-220ENST00000584684 BICDL1Q6ZP65 573 aa17.25■□□□□ 0.35
ERBB2-220ENST00000584684 SETDB2Q96T68 719 aa17.25■□□□□ 0.35
ERBB2-220ENST00000584684 PDZRN3Q9UPQ7 1066 aa17.25■□□□□ 0.35
ERBB2-220ENST00000584684 CHL1O00533 1208 aa17.24■□□□□ 0.35
ERBB2-220ENST00000584684 PRR5LQ6MZQ0 368 aa17.24■□□□□ 0.35
ERBB2-220ENST00000584684 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
ERBB2-220ENST00000584684 NUP98P52948 1817 aa17.24■□□□□ 0.35
ERBB2-220ENST00000584684 ARFGEF2Q9Y6D5 1785 aa17.23■□□□□ 0.35
ERBB2-220ENST00000584684 CNBD1Q8NA66 436 aa17.23■□□□□ 0.35
ERBB2-220ENST00000584684 ERVV-1B6SEH8 477 aa17.22■□□□□ 0.35
ERBB2-220ENST00000584684 NEUROD2Q15784 382 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms