RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 RAB3GAP1Q15042 981 aa14.29□□□□□ -0.12
ERBB2-218ENST00000584450 AMOTQ4VCS5 1084 aa14.29□□□□□ -0.12
ERBB2-218ENST00000584450 XAGE3Q8WTP9 111 aa14.29□□□□□ -0.12
ERBB2-218ENST00000584450 ECHDC1Q9NTX5 307 aa14.29□□□□□ -0.12
ERBB2-218ENST00000584450 TULP1O00294 542 aaPredicted RBP14.28□□□□□ -0.12
ERBB2-218ENST00000584450 TSPY26PQ9H489 355 aa14.28□□□□□ -0.12
ERBB2-218ENST00000584450 HTATSF1O43719 755 aaKnown RBP14.28□□□□□ -0.12
ERBB2-218ENST00000584450 CAMK4Q16566 473 aa14.28□□□□□ -0.12
ERBB2-218ENST00000584450 TFIP11Q9UBB9 837 aaKnown RBP14.28□□□□□ -0.12
ERBB2-218ENST00000584450 CHMLP26374 656 aa14.28□□□□□ -0.12
ERBB2-218ENST00000584450 PSMA5P28066 241 aa14.28□□□□□ -0.12
ERBB2-218ENST00000584450 SNRKQ9NRH2 765 aa14.28□□□□□ -0.12
ERBB2-218ENST00000584450 SHROOM2Q13796 1616 aa14.27□□□□□ -0.12
ERBB2-218ENST00000584450 LARP1Q6PKG0 1096 aaKnown RBP14.27□□□□□ -0.12
ERBB2-218ENST00000584450 NDUFB9Q9Y6M9 179 aa14.27□□□□□ -0.12
ERBB2-218ENST00000584450 BECN2A8MW95 431 aa14.27□□□□□ -0.13
ERBB2-218ENST00000584450 ZNF853P0CG23 659 aa14.27□□□□□ -0.13
ERBB2-218ENST00000584450 RBM10P98175 930 aaKnown RBP14.27□□□□□ -0.13
ERBB2-218ENST00000584450 LRRC2Q9BYS8 371 aa14.27□□□□□ -0.13
ERBB2-218ENST00000584450 CEP152O94986 1710 aa14.27□□□□□ -0.13
ERBB2-218ENST00000584450 HECW2Q9P2P5 1572 aa14.26□□□□□ -0.13
ERBB2-218ENST00000584450 CREBRFQ8IUR6 639 aa14.26□□□□□ -0.13
ERBB2-218ENST00000584450 USP44Q9H0E7 712 aa14.26□□□□□ -0.13
ERBB2-218ENST00000584450 CCDC173Q0VFZ6 552 aa14.26□□□□□ -0.13
ERBB2-218ENST00000584450 ANTXR1Q9H6X2 564 aa14.26□□□□□ -0.13
ERBB2-218ENST00000584450 RTL1A6NKG5 1358 aa14.26□□□□□ -0.13
ERBB2-218ENST00000584450 POLR1AO95602 1720 aaPredicted RBP14.26□□□□□ -0.13
ERBB2-218ENST00000584450 ISY1Q9ULR0 285 aaKnown RBP14.26□□□□□ -0.13
ERBB2-218ENST00000584450 MAP3K5Q99683 1374 aa14.25□□□□□ -0.13
ERBB2-218ENST00000584450 GUCY1B3Q02153 619 aa14.25□□□□□ -0.13
ERBB2-218ENST00000584450 DDX46Q7L014 1031 aaKnown RBP14.25□□□□□ -0.13
ERBB2-218ENST00000584450 GOLGA6L19H0YKK7 550 aa14.25□□□□□ -0.13
ERBB2-218ENST00000584450 ATP2B1P20020 1258 aa14.25□□□□□ -0.13
ERBB2-218ENST00000584450 ZNF592Q92610 1267 aa14.25□□□□□ -0.13
ERBB2-218ENST00000584450 FMNL2Q96PY5 1086 aa14.25□□□□□ -0.13
ERBB2-218ENST00000584450 HSPA2P54652 639 aa14.25□□□□□ -0.13
ERBB2-218ENST00000584450 UNC5CLQ8IV45 518 aa14.25□□□□□ -0.13
ERBB2-218ENST00000584450 IP6K1Q92551 441 aa14.25□□□□□ -0.13
ERBB2-218ENST00000584450 PALD1Q9ULE6 856 aa14.25□□□□□ -0.13
ERBB2-218ENST00000584450 PPRC1Q5VV67 1664 aaKnown RBP14.24□□□□□ -0.13
ERBB2-218ENST00000584450 ZSCAN23Q3MJ62 389 aa14.24□□□□□ -0.13
ERBB2-218ENST00000584450 CHMP4CQ96CF2 233 aa14.24□□□□□ -0.13
ERBB2-218ENST00000584450 HYPKQ9NX55 129 aa14.24□□□□□ -0.13
ERBB2-218ENST00000584450 LIMCH1Q9UPQ0 1083 aa14.24□□□□□ -0.13
ERBB2-218ENST00000584450 PRAMEF22A3QJZ6 481 aa14.24□□□□□ -0.13
ERBB2-218ENST00000584450 PRIM1P49642 420 aaKnown RBP14.24□□□□□ -0.13
ERBB2-218ENST00000584450 KLHL40Q2TBA0 621 aa14.24□□□□□ -0.13
ERBB2-218ENST00000584450 ANKRD13DQ6ZTN6 518 aa14.24□□□□□ -0.13
ERBB2-218ENST00000584450 RAB11FIP4Q86YS3 637 aa14.24□□□□□ -0.13
ERBB2-218ENST00000584450 KIF3AQ9Y496 699 aa14.24□□□□□ -0.13
ERBB2-218ENST00000584450 SBNO1A3KN83 1393 aa14.24□□□□□ -0.13
ERBB2-218ENST00000584450 TULP4Q9NRJ4 1543 aa14.24□□□□□ -0.13
ERBB2-218ENST00000584450 GLI2P10070 1586 aa14.24□□□□□ -0.13
ERBB2-218ENST00000584450 GPTP24298 496 aa14.24□□□□□ -0.13
ERBB2-218ENST00000584450 AKAP4Q5JQC9 854 aa14.24□□□□□ -0.13
ERBB2-218ENST00000584450 RALYLQ86SE5 291 aaKnown RBP14.24□□□□□ -0.13
ERBB2-218ENST00000584450 GRM8O00222 908 aa14.23□□□□□ -0.13
ERBB2-218ENST00000584450 RRAGDQ9NQL2 400 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-218ENST00000584450 NCBP3Q53F19 620 aaKnown RBP14.23□□□□□ -0.13
ERBB2-218ENST00000584450 KSR2Q6VAB6 950 aa14.23□□□□□ -0.13
ERBB2-218ENST00000584450 NFXL1Q6ZNB6 911 aa14.23□□□□□ -0.13
ERBB2-218ENST00000584450 SOS1Q07889 1333 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-218ENST00000584450 TRDNQ13061 729 aa14.23□□□□□ -0.13
ERBB2-218ENST00000584450 CCDC57Q2TAC2 916 aa14.23□□□□□ -0.13
ERBB2-218ENST00000584450 SASS6Q6UVJ0 657 aa14.23□□□□□ -0.13
ERBB2-218ENST00000584450 CLASP1Q7Z460 1538 aa14.22□□□□□ -0.13
ERBB2-218ENST00000584450 CNNM1Q9NRU3 951 aa14.22□□□□□ -0.13
ERBB2-218ENST00000584450 CEP126Q9P2H0 1117 aa14.22□□□□□ -0.13
ERBB2-218ENST00000584450 SETD1BQ9UPS6 1966 aaKnown RBP14.22□□□□□ -0.13
ERBB2-218ENST00000584450 GOLIM4O00461 696 aa14.22□□□□□ -0.13
ERBB2-218ENST00000584450 GJB2P29033 226 aa14.22□□□□□ -0.13
ERBB2-218ENST00000584450 RRP12Q5JTH9 1297 aaKnown RBP14.22□□□□□ -0.13
ERBB2-218ENST00000584450 CNPY2Q9Y2B0 182 aa14.22□□□□□ -0.13
ERBB2-218ENST00000584450 GOLGA6L6A8MZA4 724 aa14.22□□□□□ -0.13
ERBB2-218ENST00000584450 CCT2P78371 535 aaKnown RBP14.22□□□□□ -0.13
ERBB2-218ENST00000584450 EDC3Q96F86 508 aaKnown RBP14.22□□□□□ -0.13
ERBB2-218ENST00000584450 SDF4Q9BRK5 362 aa14.22□□□□□ -0.13
ERBB2-218ENST00000584450 USP25Q9UHP3 1055 aa14.22□□□□□ -0.13
ERBB2-218ENST00000584450 HIP1O00291 1037 aa14.21□□□□□ -0.13
ERBB2-218ENST00000584450 RNMTO43148 476 aaKnown RBP14.21□□□□□ -0.13
ERBB2-218ENST00000584450 CKAP2LQ8IYA6 745 aa14.21□□□□□ -0.13
ERBB2-218ENST00000584450 BICC1Q9H694 974 aaKnown RBP14.21□□□□□ -0.13
ERBB2-218ENST00000584450 ADGRB3O60242 1522 aa14.21□□□□□ -0.13
ERBB2-218ENST00000584450 GAS2L3Q86XJ1 694 aa14.21□□□□□ -0.13
ERBB2-218ENST00000584450 STX6O43752 255 aa14.2□□□□□ -0.14
ERBB2-218ENST00000584450 AK2P54819 239 aa14.2□□□□□ -0.14
ERBB2-218ENST00000584450 KRT85P78386 507 aa14.2□□□□□ -0.14
ERBB2-218ENST00000584450 PROSER3Q2NL68 480 aa14.2□□□□□ -0.14
ERBB2-218ENST00000584450 TTC39AQ5SRH9 613 aa14.2□□□□□ -0.14
ERBB2-218ENST00000584450 LMBR1LQ6UX01 489 aa14.2□□□□□ -0.14
ERBB2-218ENST00000584450 IFNL2Q8IZJ0 200 aa14.2□□□□□ -0.14
ERBB2-218ENST00000584450 TRIM5Q9C035 493 aa14.2□□□□□ -0.14
ERBB2-218ENST00000584450 FAM135BQ49AJ0 1406 aa14.2□□□□□ -0.14
ERBB2-218ENST00000584450 ARAP3Q8WWN8 1544 aa14.2□□□□□ -0.14
ERBB2-218ENST00000584450 HAND2P61296 217 aa14.2□□□□□ -0.14
ERBB2-218ENST00000584450 FAM173BQ6P4H8 233 aa14.2□□□□□ -0.14
ERBB2-218ENST00000584450 RBM8AQ9Y5S9 174 aaKnown RBP14.2□□□□□ -0.14
ERBB2-218ENST00000584450 PDCP20941 246 aa14.2□□□□□ -0.14
ERBB2-218ENST00000584450 EIF4A1P60842 406 aaKnown RBP14.2□□□□□ -0.14
ERBB2-218ENST00000584450 MTMR7Q9Y216 660 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms