RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 TAF1LQ8IZX4 1826 aa21.4■■□□□ 1.02
CDK5RAP3-230ENST00000584042 SLC4A9Q96Q91 983 aa21.39■■□□□ 1.01
CDK5RAP3-230ENST00000584042 DBF4Q9UBU7 674 aaPredicted RBP21.39■■□□□ 1.01
CDK5RAP3-230ENST00000584042 PTPRCP08575 1304 aa21.38■■□□□ 1.01
CDK5RAP3-230ENST00000584042 CANXP27824 592 aaKnown RBP21.38■■□□□ 1.01
CDK5RAP3-230ENST00000584042 CHPF2Q9P2E5 772 aa21.38■■□□□ 1.01
CDK5RAP3-230ENST00000584042 TCERG1O14776 1098 aaKnown RBP21.37■■□□□ 1.01
CDK5RAP3-230ENST00000584042 IPO8O15397 1037 aaKnown RBP21.37■■□□□ 1.01
CDK5RAP3-230ENST00000584042 ZKSCAN2Q63HK3 967 aa21.37■■□□□ 1.01
CDK5RAP3-230ENST00000584042 DNAJC10Q8IXB1 793 aa21.37■■□□□ 1.01
CDK5RAP3-230ENST00000584042 ARHGAP45Q92619 1136 aa21.37■■□□□ 1.01
CDK5RAP3-230ENST00000584042 NECTIN2Q92692 538 aa21.37■■□□□ 1.01
CDK5RAP3-230ENST00000584042 DDX21Q9NR30 783 aaKnown RBP eCLIP21.37■■□□□ 1.01
CDK5RAP3-230ENST00000584042 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
CDK5RAP3-230ENST00000584042 PXDNLA1KZ92 1463 aa21.37■■□□□ 1.01
CDK5RAP3-230ENST00000584042 TRIM37O94972 964 aa21.36■■□□□ 1.01
CDK5RAP3-230ENST00000584042 SLC4A2P04920 1241 aa21.36■■□□□ 1.01
CDK5RAP3-230ENST00000584042 NEFLP07196 543 aa21.36■■□□□ 1.01
CDK5RAP3-230ENST00000584042 STARD3NLO95772 234 aa21.35■■□□□ 1.01
CDK5RAP3-230ENST00000584042 ATF7IPQ6VMQ6 1270 aa21.35■■□□□ 1.01
CDK5RAP3-230ENST00000584042 FRAT1Q92837 279 aaPredicted RBP21.35■■□□□ 1.01
CDK5RAP3-230ENST00000584042 NOB1Q9ULX3 412 aaKnown RBP21.35■■□□□ 1.01
CDK5RAP3-230ENST00000584042 PLIN1O60240 522 aa21.34■■□□□ 1.01
CDK5RAP3-230ENST00000584042 MS4A1P11836 297 aa21.34■■□□□ 1.01
CDK5RAP3-230ENST00000584042 ATP6V1AP38606 617 aa21.34■■□□□ 1.01
CDK5RAP3-230ENST00000584042 FLIIQ13045 1269 aa21.34■■□□□ 1.01
CDK5RAP3-230ENST00000584042 PDE3AQ14432 1141 aa21.34■■□□□ 1.01
CDK5RAP3-230ENST00000584042 PDIA6Q15084 440 aa21.34■■□□□ 1.01
CDK5RAP3-230ENST00000584042 API5Q9BZZ5 524 aaKnown RBP21.34■■□□□ 1.01
CDK5RAP3-230ENST00000584042 HYPKQ9NX55 129 aa21.34■■□□□ 1.01
CDK5RAP3-230ENST00000584042 CYP19A1P11511 503 aaPredicted RBP21.33■■□□□ 1.01
CDK5RAP3-230ENST00000584042 TRIM27P14373 513 aa21.33■■□□□ 1.01
CDK5RAP3-230ENST00000584042 C4BP0C0L5 1744 aa21.32■■□□□ 1
CDK5RAP3-230ENST00000584042 NUP188Q5SRE5 1749 aa21.32■■□□□ 1
CDK5RAP3-230ENST00000584042 ABCC4O15439 1325 aa21.32■■□□□ 1
CDK5RAP3-230ENST00000584042 MYH14Q7Z406 1995 aaKnown RBP21.32■■□□□ 1
CDK5RAP3-230ENST00000584042 ITPK1Q13572 414 aa21.32■■□□□ 1
CDK5RAP3-230ENST00000584042 PROSER3Q2NL68 480 aa21.32■■□□□ 1
CDK5RAP3-230ENST00000584042 LRP10Q7Z4F1 713 aa21.32■■□□□ 1
CDK5RAP3-230ENST00000584042 ARFGEF2Q9Y6D5 1785 aa21.31■■□□□ 1
CDK5RAP3-230ENST00000584042 G2E3Q7L622 706 aa21.31■■□□□ 1
CDK5RAP3-230ENST00000584042 CNTNAP4Q9C0A0 1308 aa21.3■■□□□ 1
CDK5RAP3-230ENST00000584042 ANXA1P04083 346 aa21.3■■□□□ 1
CDK5RAP3-230ENST00000584042 DZIP1LQ8IYY4 767 aaKnown RBP21.3■■□□□ 1
CDK5RAP3-230ENST00000584042 CCNL1Q9UK58 526 aaPredicted RBP21.3■■□□□ 1
CDK5RAP3-230ENST00000584042 NBPF26B4DH59 902 aa21.29■■□□□ 1
CDK5RAP3-230ENST00000584042 FKBP5Q13451 457 aaPredicted RBP21.29■■□□□ 1
CDK5RAP3-230ENST00000584042 SLC27A3Q5K4L6 730 aa21.29■■□□□ 1
CDK5RAP3-230ENST00000584042 NBPF14Q5TI25 921 aa21.29■■□□□ 1
CDK5RAP3-230ENST00000584042 NBPF10Q6P3W6 841 aaKnown RBP21.29■■□□□ 1
CDK5RAP3-230ENST00000584042 FTSJ3Q8IY81 847 aaKnown RBP21.29■■□□□ 1
CDK5RAP3-230ENST00000584042 NBPF15Q8N660 670 aa21.29■■□□□ 1
CDK5RAP3-230ENST00000584042 PLSCR1O15162 318 aa21.28■■□□□ 1
CDK5RAP3-230ENST00000584042 A1BGP04217 495 aa21.28■■□□□ 1
CDK5RAP3-230ENST00000584042 PHAXQ9H814 394 aaKnown RBP21.28■■□□□ 1
CDK5RAP3-230ENST00000584042 CCDC87Q9NVE4 849 aa21.28■■□□□ 1
CDK5RAP3-230ENST00000584042 HMGB2P26583 209 aaKnown RBP21.27■■□□□ 1
CDK5RAP3-230ENST00000584042 CRKLP46109 303 aaKnown RBP21.27■■□□□ 1
CDK5RAP3-230ENST00000584042 C20orf194Q5TEA3 1177 aa21.27■■□□□ 1
CDK5RAP3-230ENST00000584042 LINC00116Q8NCU8 138 aa21.27■■□□□ 1
CDK5RAP3-230ENST00000584042 TNNQ9UQP3 1299 aa21.27■■□□□ 1
CDK5RAP3-230ENST00000584042 ZBTB1Q9Y2K1 713 aa21.27■■□□□ 1
CDK5RAP3-230ENST00000584042 BCORQ6W2J9 1755 aa21.27■■□□□ 1
CDK5RAP3-230ENST00000584042 ADCY9O60503 1353 aa21.26■□□□□ 0.99
CDK5RAP3-230ENST00000584042 SCN7AQ01118 1682 aa21.26■□□□□ 0.99
CDK5RAP3-230ENST00000584042 DDX58O95786 925 aaKnown RBP21.26■□□□□ 0.99
CDK5RAP3-230ENST00000584042 MYL6BP14649 208 aa21.26■□□□□ 0.99
CDK5RAP3-230ENST00000584042 IL6STP40189 918 aaPredicted RBP21.26■□□□□ 0.99
CDK5RAP3-230ENST00000584042 ATP10DQ9P241 1426 aa21.26■□□□□ 0.99
CDK5RAP3-230ENST00000584042 RLBP1P12271 317 aa21.25■□□□□ 0.99
CDK5RAP3-230ENST00000584042 PIP4K2AP48426 406 aaPredicted RBP21.25■□□□□ 0.99
CDK5RAP3-230ENST00000584042 PANK1Q8TE04 598 aa21.25■□□□□ 0.99
CDK5RAP3-230ENST00000584042 UBR3Q6ZT12 1888 aa21.24■□□□□ 0.99
CDK5RAP3-230ENST00000584042 APBA3O96018 575 aa21.24■□□□□ 0.99
CDK5RAP3-230ENST00000584042 RC3H1Q5TC82 1133 aaKnown RBP21.24■□□□□ 0.99
CDK5RAP3-230ENST00000584042 INTS5Q6P9B9 1019 aaKnown RBP21.24■□□□□ 0.99
CDK5RAP3-230ENST00000584042 XAGE3Q8WTP9 111 aa21.24■□□□□ 0.99
CDK5RAP3-230ENST00000584042 CLUAP1Q96AJ1 413 aa21.24■□□□□ 0.99
CDK5RAP3-230ENST00000584042 ANKRD36CQ5JPF3 1778 aa21.23■□□□□ 0.99
CDK5RAP3-230ENST00000584042 IRX6P78412 446 aaPredicted RBP21.23■□□□□ 0.99
CDK5RAP3-230ENST00000584042 ERICH6BQ5W0A0 696 aa21.23■□□□□ 0.99
CDK5RAP3-230ENST00000584042 C4AP0C0L4 1744 aa21.23■□□□□ 0.99
CDK5RAP3-230ENST00000584042 MVPQ14764 893 aaKnown RBP21.22■□□□□ 0.99
CDK5RAP3-230ENST00000584042 TXNRD1Q16881 649 aa21.22■□□□□ 0.99
CDK5RAP3-230ENST00000584042 COPS6Q7L5N1 327 aa21.22■□□□□ 0.99
CDK5RAP3-230ENST00000584042 TMEM57Q8N5G2 664 aa21.22■□□□□ 0.99
CDK5RAP3-230ENST00000584042 COL15A1P39059 1388 aa21.22■□□□□ 0.99
CDK5RAP3-230ENST00000584042 IBTKQ9P2D0 1353 aaPredicted RBP21.22■□□□□ 0.99
CDK5RAP3-230ENST00000584042 EIF5P55010 431 aaKnown RBP21.21■□□□□ 0.99
CDK5RAP3-230ENST00000584042 FKBP8Q14318 412 aa21.21■□□□□ 0.99
CDK5RAP3-230ENST00000584042 INTS3Q68E01 1043 aaKnown RBP21.21■□□□□ 0.99
CDK5RAP3-230ENST00000584042 KSR2Q6VAB6 950 aa21.21■□□□□ 0.99
CDK5RAP3-230ENST00000584042 DNAAF4Q8WXU2 420 aa21.21■□□□□ 0.99
CDK5RAP3-230ENST00000584042 CRBNQ96SW2 442 aa21.21■□□□□ 0.99
CDK5RAP3-230ENST00000584042 LRRC4BQ9NT99 713 aa21.21■□□□□ 0.99
CDK5RAP3-230ENST00000584042 PI4KAP2A4QPH2 592 aa21.2■□□□□ 0.98
CDK5RAP3-230ENST00000584042 F6X3S4 739 aa21.2■□□□□ 0.98
CDK5RAP3-230ENST00000584042 CCT4P50991 539 aaKnown RBP21.2■□□□□ 0.98
CDK5RAP3-230ENST00000584042 KCNQ4P56696 695 aa21.2■□□□□ 0.98
CDK5RAP3-230ENST00000584042 PI4KAP1Q8N8J0 262 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms