RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 CHADLQ6NUI6 762 aa15.91■□□□□ 0.14
NUP85-224ENST00000583948 PUS7Q96PZ0 661 aaKnown RBP15.91■□□□□ 0.14
NUP85-224ENST00000583948 PRDM10Q9NQV6 1147 aa15.91■□□□□ 0.14
NUP85-224ENST00000583948 TNRC18O15417 2968 aaPredicted RBP15.91■□□□□ 0.14
NUP85-224ENST00000583948 CTCFP49711 727 aaPredicted RBP15.9■□□□□ 0.14
NUP85-224ENST00000583948 NFIXQ14938 502 aa15.9■□□□□ 0.14
NUP85-224ENST00000583948 ZNF831Q5JPB2 1677 aa15.89■□□□□ 0.13
NUP85-224ENST00000583948 CCDC85CA6NKD9 419 aa15.89■□□□□ 0.13
NUP85-224ENST00000583948 C2CD5Q86YS7 1000 aa15.89■□□□□ 0.13
NUP85-224ENST00000583948 VIRMAQ69YN4 1812 aaKnown RBP15.89■□□□□ 0.13
NUP85-224ENST00000583948 DLEC1Q9Y238 1755 aa15.88■□□□□ 0.13
NUP85-224ENST00000583948 C21orf2O43822 256 aa15.88■□□□□ 0.13
NUP85-224ENST00000583948 HSPA8P11142 646 aaKnown RBP15.88■□□□□ 0.13
NUP85-224ENST00000583948 TNNT2P45379 298 aaPredicted RBP15.88■□□□□ 0.13
NUP85-224ENST00000583948 CABP4P57796 275 aa15.88■□□□□ 0.13
NUP85-224ENST00000583948 BCL2L12Q9HB09 334 aa15.88■□□□□ 0.13
NUP85-224ENST00000583948 EIF4A2Q14240 407 aaKnown RBP15.87■□□□□ 0.13
NUP85-224ENST00000583948 ERFEQ4G0M1 354 aa15.87■□□□□ 0.13
NUP85-224ENST00000583948 BICDL1Q6ZP65 573 aa15.87■□□□□ 0.13
NUP85-224ENST00000583948 DNAJC10Q8IXB1 793 aa15.87■□□□□ 0.13
NUP85-224ENST00000583948 TTLL6Q8N841 843 aa15.87■□□□□ 0.13
NUP85-224ENST00000583948 NFATC2IPQ8NCF5 419 aa15.87■□□□□ 0.13
NUP85-224ENST00000583948 AIDAQ96BJ3 306 aa15.87■□□□□ 0.13
NUP85-224ENST00000583948 WBP1LQ9NX94 342 aa15.87■□□□□ 0.13
NUP85-224ENST00000583948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.87■□□□□ 0.131e-7■□□□□ 10.5
NUP85-224ENST00000583948 ERVV-2B6SEH9 535 aa15.86■□□□□ 0.13
NUP85-224ENST00000583948 SERPINB2P05120 415 aa15.86■□□□□ 0.13
NUP85-224ENST00000583948 TIMELESSQ9UNS1 1208 aa15.86■□□□□ 0.13
NUP85-224ENST00000583948 WASHC2AQ641Q2 1341 aa15.86■□□□□ 0.13
NUP85-224ENST00000583948 PASKQ96RG2 1323 aa15.86■□□□□ 0.13
NUP85-224ENST00000583948 ZC3H4Q9UPT8 1303 aaKnown RBP15.86■□□□□ 0.13
NUP85-224ENST00000583948 CACNA1SQ13698 1873 aa15.85■□□□□ 0.13
NUP85-224ENST00000583948 ANKRD31Q8N7Z5 1873 aa15.85■□□□□ 0.13
NUP85-224ENST00000583948 FMR1Q06787 632 aaKnown RBP eCLIP15.85■□□□□ 0.13
NUP85-224ENST00000583948 DPY19L2Q6NUT2 758 aa15.85■□□□□ 0.13
NUP85-224ENST00000583948 ZNF530Q6P9A1 599 aaPredicted RBP15.85■□□□□ 0.13
NUP85-224ENST00000583948 ZNF622Q969S3 477 aaKnown RBP eCLIP15.85■□□□□ 0.131e-7■■□□□ 12.1
NUP85-224ENST00000583948 POLKQ9UBT6 870 aa15.85■□□□□ 0.13
NUP85-224ENST00000583948 TSKSQ9UJT2 592 aa15.85■□□□□ 0.13
NUP85-224ENST00000583948 DICER1Q9UPY3 1922 aaKnown RBP15.85■□□□□ 0.13
NUP85-224ENST00000583948 NRXN2Q9P2S2 1712 aa15.85■□□□□ 0.13
NUP85-224ENST00000583948 ANKRD26Q9UPS8 1709 aa15.85■□□□□ 0.13
NUP85-224ENST00000583948 ZPR1O75312 459 aa15.84■□□□□ 0.13
NUP85-224ENST00000583948 MLLT1Q03111 559 aaPredicted RBP15.84■□□□□ 0.13
NUP85-224ENST00000583948 COL11A2P13942 1736 aaPredicted RBP15.83■□□□□ 0.13
NUP85-224ENST00000583948 FER1L6Q2WGJ9 1857 aa15.83■□□□□ 0.12
NUP85-224ENST00000583948 AEBP1Q8IUX7 1158 aa15.83■□□□□ 0.12
NUP85-224ENST00000583948 KIF24Q5T7B8 1368 aa15.83■□□□□ 0.12
NUP85-224ENST00000583948 ITGBL1O95965 494 aaPredicted RBP15.82■□□□□ 0.12
NUP85-224ENST00000583948 SLC39A6Q13433 755 aa15.82■□□□□ 0.12
NUP85-224ENST00000583948 EAPPQ56P03 285 aaPredicted RBP15.82■□□□□ 0.12
NUP85-224ENST00000583948 SOS1Q07889 1333 aaPredicted RBP15.82■□□□□ 0.12
NUP85-224ENST00000583948 TMEM88BA6NKF7 163 aa15.81■□□□□ 0.12
NUP85-224ENST00000583948 H0YIN7 160 aa15.81■□□□□ 0.12
NUP85-224ENST00000583948 MTHFSP49914 203 aa15.81■□□□□ 0.12
NUP85-224ENST00000583948 SLX4Q8IY92 1834 aa15.81■□□□□ 0.12
NUP85-224ENST00000583948 CFAP44Q96MT7 982 aa15.81■□□□□ 0.12
NUP85-224ENST00000583948 ZBTB1Q9Y2K1 713 aa15.81■□□□□ 0.12
NUP85-224ENST00000583948 GRM1Q13255 1194 aa15.8■□□□□ 0.12
NUP85-224ENST00000583948 TAF1DQ9H5J8 278 aaPredicted RBP15.8■□□□□ 0.12
NUP85-224ENST00000583948 MAP1SQ66K74 1059 aaPredicted RBP15.79■□□□□ 0.12
NUP85-224ENST00000583948 OLFM4Q6UX06 510 aa15.79■□□□□ 0.12
NUP85-224ENST00000583948 NARFQ9UHQ1 456 aa15.79■□□□□ 0.12
NUP85-224ENST00000583948 CLEC11AQ9Y240 323 aa15.79■□□□□ 0.12
NUP85-224ENST00000583948 ZNF541Q9H0D2 1346 aa15.78■□□□□ 0.12
NUP85-224ENST00000583948 CYP19A1P11511 503 aaPredicted RBP15.78■□□□□ 0.12
NUP85-224ENST00000583948 LGR6Q9HBX8 967 aa15.78■□□□□ 0.12
NUP85-224ENST00000583948 PCDH10Q9P2E7 1040 aa15.78■□□□□ 0.12
NUP85-224ENST00000583948 COL15A1P39059 1388 aa15.77■□□□□ 0.12
NUP85-224ENST00000583948 WDR33Q9C0J8 1336 aaKnown RBP15.77■□□□□ 0.12
NUP85-224ENST00000583948 CANXP27824 592 aaKnown RBP15.77■□□□□ 0.12
NUP85-224ENST00000583948 DEFB115Q30KQ5 88 aa15.77■□□□□ 0.12
NUP85-224ENST00000583948 PLEKHO1Q53GL0 409 aaPredicted RBP15.77■□□□□ 0.12
NUP85-224ENST00000583948 TBC1D9BQ66K14 1250 aa15.77■□□□□ 0.12
NUP85-224ENST00000583948 LDHDQ86WU2 507 aa15.76■□□□□ 0.11
NUP85-224ENST00000583948 RGS19P49795 217 aa15.75■□□□□ 0.11
NUP85-224ENST00000583948 TAOK3Q9H2K8 898 aa15.75■□□□□ 0.11
NUP85-224ENST00000583948 HSP90AB1P08238 724 aaKnown RBP15.74■□□□□ 0.11
NUP85-224ENST00000583948 CYP4F22Q6NT55 531 aa15.74■□□□□ 0.11
NUP85-224ENST00000583948 ABT1Q9ULW3 272 aaKnown RBP15.74■□□□□ 0.11
NUP85-224ENST00000583948 CASP8AP2Q9UKL3 1982 aa15.73■□□□□ 0.11
NUP85-224ENST00000583948 SCN11AQ9UI33 1791 aa15.73■□□□□ 0.11
NUP85-224ENST00000583948 RASSF10A6NK89 507 aa15.73■□□□□ 0.11
NUP85-224ENST00000583948 PRR5LQ6MZQ0 368 aa15.73■□□□□ 0.11
NUP85-224ENST00000583948 PAXIP1Q6ZW49 1069 aaPredicted RBP15.73■□□□□ 0.11
NUP85-224ENST00000583948 CNTROBQ8N137 903 aa15.73■□□□□ 0.11
NUP85-224ENST00000583948 ADAMTSL1Q8N6G6 1762 aa15.72■□□□□ 0.11
NUP85-224ENST00000583948 RNF123Q5XPI4 1314 aa15.72■□□□□ 0.11
NUP85-224ENST00000583948 AOC2O75106 756 aa15.72■□□□□ 0.11
NUP85-224ENST00000583948 C1orf141Q5JVX7 400 aa15.72■□□□□ 0.11
NUP85-224ENST00000583948 ZNF277Q9NRM2 450 aaPredicted RBP15.72■□□□□ 0.11
NUP85-224ENST00000583948 TBC1D2BQ9UPU7 963 aa15.72■□□□□ 0.11
NUP85-224ENST00000583948 SCN4AP35499 1836 aa15.71■□□□□ 0.11
NUP85-224ENST00000583948 PRPF40BQ6NWY9 871 aaKnown RBP15.71■□□□□ 0.11
NUP85-224ENST00000583948 SLC51AQ86UW1 340 aa15.71■□□□□ 0.11
NUP85-224ENST00000583948 ZNF330Q9Y3S2 320 aaPredicted RBP15.71■□□□□ 0.11
NUP85-224ENST00000583948 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
NUP85-224ENST00000583948 TRAF5O00463 557 aa15.7■□□□□ 0.1
NUP85-224ENST00000583948 EPHX2P34913 555 aa15.7■□□□□ 0.1
NUP85-224ENST00000583948 L3MBTL3Q96JM7 780 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms