RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 TRPM2O94759 1503 aa12.58□□□□□ -0.4
RNF43-207ENST00000583753 RIMS2Q9UQ26 1411 aa12.58□□□□□ -0.4
RNF43-207ENST00000583753 DACT1Q9NYF0 836 aa12.58□□□□□ -0.4
RNF43-207ENST00000583753 CLASP1Q7Z460 1538 aa12.58□□□□□ -0.4
RNF43-207ENST00000583753 MYL6BP14649 208 aa12.58□□□□□ -0.4
RNF43-207ENST00000583753 CREBRFQ8IUR6 639 aa12.58□□□□□ -0.4
RNF43-207ENST00000583753 SYTL4Q96C24 671 aaPredicted RBP12.58□□□□□ -0.4
RNF43-207ENST00000583753 IQGAP3Q86VI3 1631 aa12.57□□□□□ -0.4
RNF43-207ENST00000583753 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
RNF43-207ENST00000583753 NRDCO43847 1150 aa12.57□□□□□ -0.4
RNF43-207ENST00000583753 ATP8B2P98198 1209 aa12.57□□□□□ -0.4
RNF43-207ENST00000583753 KIF1BPQ96EK5 621 aa12.57□□□□□ -0.4
RNF43-207ENST00000583753 CGNQ9P2M7 1197 aaKnown RBP12.57□□□□□ -0.4
RNF43-207ENST00000583753 SBNO2Q9Y2G9 1366 aa12.57□□□□□ -0.4
RNF43-207ENST00000583753 HTATSF1O43719 755 aaKnown RBP12.57□□□□□ -0.4
RNF43-207ENST00000583753 ANO6Q4KMQ2 910 aa12.57□□□□□ -0.4
RNF43-207ENST00000583753 ACEP12821 1306 aa12.57□□□□□ -0.4
RNF43-207ENST00000583753 CHL1O00533 1208 aa12.56□□□□□ -0.4
RNF43-207ENST00000583753 LRMPQ12912 555 aa12.56□□□□□ -0.4
RNF43-207ENST00000583753 RNF20Q5VTR2 975 aa12.56□□□□□ -0.4
RNF43-207ENST00000583753 RASEFQ8IZ41 740 aa12.56□□□□□ -0.4
RNF43-207ENST00000583753 CCDC94Q9BW85 323 aaPredicted RBP12.56□□□□□ -0.4
RNF43-207ENST00000583753 GNAT3A8MTJ3 354 aa12.56□□□□□ -0.4
RNF43-207ENST00000583753 SMC2O95347 1197 aa12.56□□□□□ -0.4
RNF43-207ENST00000583753 CCDC73Q6ZRK6 1079 aa12.56□□□□□ -0.4
RNF43-207ENST00000583753 DNAJC25Q9H1X3 360 aa12.56□□□□□ -0.4
RNF43-207ENST00000583753 ATP7AQ04656 1500 aa12.56□□□□□ -0.4
RNF43-207ENST00000583753 ISM2Q6H9L7 571 aa12.56□□□□□ -0.4
RNF43-207ENST00000583753 RIC3Q7Z5B4 369 aa12.56□□□□□ -0.4
RNF43-207ENST00000583753 ERCC4Q92889 916 aaPredicted RBP12.56□□□□□ -0.4
RNF43-207ENST00000583753 PYCARDQ9ULZ3 195 aa12.56□□□□□ -0.4
RNF43-207ENST00000583753 A0A087WWV3 80 aa12.55□□□□□ -0.4
RNF43-207ENST00000583753 MPRIPQ6WCQ1 1025 aa12.55□□□□□ -0.4
RNF43-207ENST00000583753 RAB11FIP4Q86YS3 637 aa12.55□□□□□ -0.4
RNF43-207ENST00000583753 CLIP2Q9UDT6 1046 aa12.55□□□□□ -0.4
RNF43-207ENST00000583753 SNX14Q9Y5W7 946 aa12.55□□□□□ -0.4
RNF43-207ENST00000583753 ME1P48163 572 aa12.55□□□□□ -0.4
RNF43-207ENST00000583753 ZNF165P49910 485 aa12.55□□□□□ -0.4
RNF43-207ENST00000583753 BCL2L12Q9HB09 334 aa12.55□□□□□ -0.4
RNF43-207ENST00000583753 NDUFB9Q9Y6M9 179 aa12.55□□□□□ -0.4
RNF43-207ENST00000583753 MYRIPQ8NFW9 859 aa12.55□□□□□ -0.4
RNF43-207ENST00000583753 PIBF1Q8WXW3 757 aa12.55□□□□□ -0.4
RNF43-207ENST00000583753 YTHDC2Q9H6S0 1430 aaKnown RBP12.54□□□□□ -0.4
RNF43-207ENST00000583753 NBPF7P0C2Y1 421 aaPredicted RBP12.54□□□□□ -0.4
RNF43-207ENST00000583753 TMX1Q9H3N1 280 aa12.54□□□□□ -0.4
RNF43-207ENST00000583753 CCT2P78371 535 aaKnown RBP12.54□□□□□ -0.4
RNF43-207ENST00000583753 HSP90AB4PQ58FF6 505 aa12.54□□□□□ -0.4
RNF43-207ENST00000583753 C1orf141Q5JVX7 400 aa12.54□□□□□ -0.4
RNF43-207ENST00000583753 BIN1O00499 593 aa12.54□□□□□ -0.4
RNF43-207ENST00000583753 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
RNF43-207ENST00000583753 PIP4K2AP48426 406 aaPredicted RBP12.54□□□□□ -0.4
RNF43-207ENST00000583753 PRIMPOLQ96LW4 560 aa12.54□□□□□ -0.4
RNF43-207ENST00000583753 CHPF2Q9P2E5 772 aa12.54□□□□□ -0.4
RNF43-207ENST00000583753 UNC13BO14795 1591 aa12.54□□□□□ -0.4
RNF43-207ENST00000583753 LARGE1O95461 756 aa12.53□□□□□ -0.4
RNF43-207ENST00000583753 ABCC1P33527 1531 aa12.53□□□□□ -0.4
RNF43-207ENST00000583753 KINO60870 393 aaKnown RBP12.53□□□□□ -0.4
RNF43-207ENST00000583753 ZNF853P0CG23 659 aa12.53□□□□□ -0.4
RNF43-207ENST00000583753 CSB-PGBD3P0DP91 1061 aa12.53□□□□□ -0.4
RNF43-207ENST00000583753 PDCP20941 246 aa12.53□□□□□ -0.4
RNF43-207ENST00000583753 PSMA5P28066 241 aa12.53□□□□□ -0.4
RNF43-207ENST00000583753 TYRO3Q06418 890 aa12.53□□□□□ -0.4
RNF43-207ENST00000583753 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.53□□□□□ -0.4
RNF43-207ENST00000583753 ASXL2Q76L83 1435 aa12.53□□□□□ -0.4
RNF43-207ENST00000583753 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
RNF43-207ENST00000583753 KLHDC4Q8TBB5 520 aa12.53□□□□□ -0.4
RNF43-207ENST00000583753 INTS4Q96HW7 963 aaKnown RBP12.53□□□□□ -0.4
RNF43-207ENST00000583753 EYA1Q99502 592 aa12.53□□□□□ -0.4
RNF43-207ENST00000583753 NRBP1Q9UHY1 535 aa12.53□□□□□ -0.4
RNF43-207ENST00000583753 RBM8AQ9Y5S9 174 aaKnown RBP12.53□□□□□ -0.4
RNF43-207ENST00000583753 TTC21BQ7Z4L5 1316 aa12.52□□□□□ -0.4
RNF43-207ENST00000583753 CYP2E1P05181 493 aaPredicted RBP12.52□□□□□ -0.4
RNF43-207ENST00000583753 UVSSAQ2YD98 709 aa12.52□□□□□ -0.4
RNF43-207ENST00000583753 ADCK5Q3MIX3 580 aa12.52□□□□□ -0.4
RNF43-207ENST00000583753 PDLIM2Q96JY6 352 aa12.52□□□□□ -0.4
RNF43-207ENST00000583753 LIG1P18858 919 aa12.52□□□□□ -0.41
RNF43-207ENST00000583753 ANAPC15P60006 121 aa12.52□□□□□ -0.41
RNF43-207ENST00000583753 PTH1RQ03431 593 aa12.52□□□□□ -0.41
RNF43-207ENST00000583753 CWF19L2Q2TBE0 894 aaKnown RBP12.52□□□□□ -0.41
RNF43-207ENST00000583753 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.41
RNF43-207ENST00000583753 IL25Q9H293 177 aa12.52□□□□□ -0.41
RNF43-207ENST00000583753 MAP3K19Q56UN5 1328 aa12.52□□□□□ -0.41
RNF43-207ENST00000583753 NAA30Q147X3 362 aaPredicted RBP12.51□□□□□ -0.41
RNF43-207ENST00000583753 RUFY3Q7L099 469 aa12.51□□□□□ -0.41
RNF43-207ENST00000583753 OSCARQ8IYS5 282 aa12.51□□□□□ -0.41
RNF43-207ENST00000583753 FAM227BQ96M60 508 aa12.51□□□□□ -0.41
RNF43-207ENST00000583753 PUS7Q96PZ0 661 aaKnown RBP12.51□□□□□ -0.41
RNF43-207ENST00000583753 EDC3Q96F86 508 aaKnown RBP12.51□□□□□ -0.41
RNF43-207ENST00000583753 EID1Q9Y6B2 187 aa12.51□□□□□ -0.41
RNF43-207ENST00000583753 IQSEC2Q5JU85 1478 aa12.51□□□□□ -0.41
RNF43-207ENST00000583753 BTBD11A6QL63 1104 aa12.51□□□□□ -0.41
RNF43-207ENST00000583753 ATP2B1P20020 1258 aa12.51□□□□□ -0.41
RNF43-207ENST00000583753 CDC37L1Q7L3B6 337 aa12.51□□□□□ -0.41
RNF43-207ENST00000583753 CCDC85AQ96PX6 553 aaPredicted RBP12.51□□□□□ -0.41
RNF43-207ENST00000583753 ABCA6Q8N139 1617 aa12.51□□□□□ -0.41
RNF43-207ENST00000583753 TPM3P06753 285 aa12.5□□□□□ -0.41
RNF43-207ENST00000583753 NEXNQ0ZGT2 675 aa12.5□□□□□ -0.41
RNF43-207ENST00000583753 ECHDC1Q9NTX5 307 aa12.5□□□□□ -0.41
RNF43-207ENST00000583753 NCOA3Q9Y6Q9 1424 aa12.5□□□□□ -0.41
RNF43-207ENST00000583753 HSP90AA4PQ58FG1 418 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms