RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, human

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA3-213	ENST00000582486	SRCIN1	Q9C0H9	1055 aa		14.02	□□□□□ -0.17
GGA3-213	ENST00000582486	USP44	Q9H0E7	712 aa		14.02	□□□□□ -0.17
GGA3-213	ENST00000582486	DCTPP1	Q9H773	170 aa		14.02	□□□□□ -0.17
GGA3-213	ENST00000582486	USP16	Q9Y5T5	823 aa		14.02	□□□□□ -0.17
GGA3-213	ENST00000582486	ADCY9	O60503	1353 aa		14.01	□□□□□ -0.17
GGA3-213	ENST00000582486	C5	P01031	1676 aa		14.01	□□□□□ -0.17
GGA3-213	ENST00000582486	BEND3	Q5T5X7	828 aa		14.01	□□□□□ -0.17
GGA3-213	ENST00000582486	NPM2	Q86SE8	214 aa	Known RBP	14	□□□□□ -0.17
GGA3-213	ENST00000582486	MAP3K2	Q9Y2U5	619 aa		14	□□□□□ -0.17
GGA3-213	ENST00000582486	MYL6B	P14649	208 aa		13.99	□□□□□ -0.17
GGA3-213	ENST00000582486	AIMP1	Q12904	312 aa	Known RBP	13.99	□□□□□ -0.17
GGA3-213	ENST00000582486	KSR2	Q6VAB6	950 aa		13.99	□□□□□ -0.17
GGA3-213	ENST00000582486	DISP2	A7MBM2	1401 aa		13.99	□□□□□ -0.17
GGA3-213	ENST00000582486	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.99	□□□□□ -0.17
GGA3-213	ENST00000582486	UBTFL1	P0CB47	393 aa	Predicted RBP	13.98	□□□□□ -0.17
GGA3-213	ENST00000582486	ANP32A	P39687	249 aa	Known RBP	13.98	□□□□□ -0.17
GGA3-213	ENST00000582486	LRRFIP2	Q9Y608	721 aa	Known RBP	13.98	□□□□□ -0.17
GGA3-213	ENST00000582486	HMMR	O75330	724 aa		13.98	□□□□□ -0.17
GGA3-213	ENST00000582486	PIP4K2A	P48426	406 aa	Predicted RBP	13.98	□□□□□ -0.17
GGA3-213	ENST00000582486	EXOC5	O00471	708 aa		13.97	□□□□□ -0.17
GGA3-213	ENST00000582486	PTCD1	O75127	700 aa	Known RBP	13.97	□□□□□ -0.17
GGA3-213	ENST00000582486	DDX58	O95786	925 aa	Known RBP	13.97	□□□□□ -0.17
GGA3-213	ENST00000582486	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.97	□□□□□ -0.17
GGA3-213	ENST00000582486	TMOD3	Q9NYL9	352 aa		13.97	□□□□□ -0.17
GGA3-213	ENST00000582486	PLCH1	Q4KWH8	1693 aa		13.97	□□□□□ -0.17
GGA3-213	ENST00000582486	PNMA6E	A0A0J9YXQ4	647 aa		13.96	□□□□□ -0.17
GGA3-213	ENST00000582486	COPS6	Q7L5N1	327 aa		13.96	□□□□□ -0.17
GGA3-213	ENST00000582486	LRP10	Q7Z4F1	713 aa		13.96	□□□□□ -0.17
GGA3-213	ENST00000582486	XAGE3	Q8WTP9	111 aa		13.96	□□□□□ -0.17
GGA3-213	ENST00000582486	SPATA31A1	Q5TZJ5	1347 aa		13.96	□□□□□ -0.18
GGA3-213	ENST00000582486	GLI3	P10071	1580 aa		13.96	□□□□□ -0.18
GGA3-213	ENST00000582486	ATP8B2	P98198	1209 aa		13.96	□□□□□ -0.18
GGA3-213	ENST00000582486	BCL11A	Q9H165	835 aa		13.96	□□□□□ -0.18
GGA3-213	ENST00000582486	TOGARAM1	Q9Y4F4	1720 aa		13.96	□□□□□ -0.18
GGA3-213	ENST00000582486	APBB1	O00213	710 aa		13.95	□□□□□ -0.18
GGA3-213	ENST00000582486	SEC24B	O95487	1268 aa		13.95	□□□□□ -0.18
GGA3-213	ENST00000582486	CWF19L2	Q2TBE0	894 aa	Known RBP	13.95	□□□□□ -0.18
GGA3-213	ENST00000582486	RIC3	Q7Z5B4	369 aa		13.95	□□□□□ -0.18
GGA3-213	ENST00000582486	PIGB	Q92521	554 aa		13.95	□□□□□ -0.18
GGA3-213	ENST00000582486	MSH5	O43196	834 aa		13.95	□□□□□ -0.18
GGA3-213	ENST00000582486	KCP	Q6ZWJ8	1503 aa		13.94	□□□□□ -0.18
GGA3-213	ENST00000582486	ALDH1L1	O75891	902 aa		13.94	□□□□□ -0.18
GGA3-213	ENST00000582486	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.94	□□□□□ -0.18
GGA3-213	ENST00000582486	UBR2	Q8IWV8	1755 aa		13.94	□□□□□ -0.18
GGA3-213	ENST00000582486	NRAP	Q86VF7	1730 aa		13.94	□□□□□ -0.18
GGA3-213	ENST00000582486	SMARCA5	O60264	1052 aa	Predicted RBP	13.93	□□□□□ -0.18
GGA3-213	ENST00000582486	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.93	□□□□□ -0.18
GGA3-213	ENST00000582486	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.93	□□□□□ -0.18
GGA3-213	ENST00000582486	LINS1	Q8NG48	757 aa		13.93	□□□□□ -0.18
GGA3-213	ENST00000582486	ASAP1	Q9ULH1	1129 aa		13.93	□□□□□ -0.18
GGA3-213	ENST00000582486	THRAP3	Q9Y2W1	955 aa	Known RBP	13.93	□□□□□ -0.18
GGA3-213	ENST00000582486	TNS2	Q63HR2	1409 aa		13.93	□□□□□ -0.18
GGA3-213	ENST00000582486	ANKRD13D	Q6ZTN6	518 aa		13.93	□□□□□ -0.18
GGA3-213	ENST00000582486	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.93	□□□□□ -0.18
GGA3-213	ENST00000582486	EXOC6B	Q9Y2D4	811 aa		13.93	□□□□□ -0.18
GGA3-213	ENST00000582486	CCDC9	Q9Y3X0	531 aa	Known RBP	13.93	□□□□□ -0.18
GGA3-213	ENST00000582486	PAPPA	Q13219	1627 aa		13.93	□□□□□ -0.18
GGA3-213	ENST00000582486	SLIT2	O94813	1529 aa		13.92	□□□□□ -0.18
GGA3-213	ENST00000582486	NBPF26	B4DH59	902 aa		13.92	□□□□□ -0.18
GGA3-213	ENST00000582486	NBPF14	Q5TI25	921 aa		13.92	□□□□□ -0.18
GGA3-213	ENST00000582486	NBPF10	Q6P3W6	841 aa	Known RBP	13.92	□□□□□ -0.18
GGA3-213	ENST00000582486	NBPF15	Q8N660	670 aa		13.92	□□□□□ -0.18
GGA3-213	ENST00000582486	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.92	□□□□□ -0.18
GGA3-213	ENST00000582486	KAT6B	Q8WYB5	2073 aa		13.92	□□□□□ -0.18
GGA3-213	ENST00000582486	SPATA31A5	Q5VU36	1347 aa		13.92	□□□□□ -0.18
GGA3-213	ENST00000582486	SPATA31A7	Q8IWB4	1347 aa		13.92	□□□□□ -0.18
GGA3-213	ENST00000582486	A1BG	P04217	495 aa		13.92	□□□□□ -0.18
GGA3-213	ENST00000582486	IGKV5-2	P06315	115 aa		13.92	□□□□□ -0.18
GGA3-213	ENST00000582486	PPP1R42	Q7Z4L9	355 aa		13.92	□□□□□ -0.18
GGA3-213	ENST00000582486	PLEKHM2	Q8IWE5	1019 aa		13.92	□□□□□ -0.18
GGA3-213	ENST00000582486	IPO9	Q96P70	1041 aa	Known RBP	13.92	□□□□□ -0.18
GGA3-213	ENST00000582486	LAMB4	A4D0S4	1761 aa		13.91	□□□□□ -0.18
GGA3-213	ENST00000582486	JCAD	Q9P266	1359 aa		13.91	□□□□□ -0.18
GGA3-213	ENST00000582486	DDB1	Q16531	1140 aa		13.91	□□□□□ -0.18
GGA3-213	ENST00000582486	ATG3	Q9NT62	314 aa		13.91	□□□□□ -0.18
GGA3-213	ENST00000582486	NEXN	Q0ZGT2	675 aa		13.91	□□□□□ -0.18
GGA3-213	ENST00000582486	BMP2KL	Q5H9B9	411 aa		13.91	□□□□□ -0.18
GGA3-213	ENST00000582486	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.91	□□□□□ -0.18
GGA3-213	ENST00000582486	SSH3	Q8TE77	659 aa		13.91	□□□□□ -0.18
GGA3-213	ENST00000582486	SYTL4	Q96C24	671 aa	Predicted RBP	13.91	□□□□□ -0.18
GGA3-213	ENST00000582486	C8orf37	Q96NL8	207 aa		13.91	□□□□□ -0.18
GGA3-213	ENST00000582486	MYD88	Q99836	296 aa		13.91	□□□□□ -0.18
GGA3-213	ENST00000582486	METTL22	Q9BUU2	404 aa	Predicted RBP	13.91	□□□□□ -0.18
GGA3-213	ENST00000582486	ERBB4	Q15303	1308 aa		13.9	□□□□□ -0.18
GGA3-213	ENST00000582486	WNK3	Q9BYP7	1800 aa		13.9	□□□□□ -0.18
GGA3-213	ENST00000582486	CERK	Q8TCT0	537 aa		13.9	□□□□□ -0.18
GGA3-213	ENST00000582486	NEURL1B	A8MQ27	555 aa		13.9	□□□□□ -0.18
GGA3-213	ENST00000582486	GRM8	O00222	908 aa		13.9	□□□□□ -0.18
GGA3-213	ENST00000582486	SRGAP3	O43295	1099 aa		13.9	□□□□□ -0.18
GGA3-213	ENST00000582486	UNC5CL	Q8IV45	518 aa		13.9	□□□□□ -0.18
GGA3-213	ENST00000582486	NGLY1	Q96IV0	654 aa		13.9	□□□□□ -0.18
GGA3-213	ENST00000582486	ITGB4	P16144	1822 aa		13.9	□□□□□ -0.18
GGA3-213	ENST00000582486	BCL9	O00512	1426 aa		13.89	□□□□□ -0.19
GGA3-213	ENST00000582486	POLA2	Q14181	598 aa		13.89	□□□□□ -0.19
GGA3-213	ENST00000582486	NWD2	Q9ULI1	1742 aa		13.89	□□□□□ -0.19
GGA3-213	ENST00000582486	PRIM1	P49642	420 aa	Known RBP	13.89	□□□□□ -0.19
GGA3-213	ENST00000582486	RBM42	Q9BTD8	480 aa	Known RBP	13.89	□□□□□ -0.19
GGA3-213	ENST00000582486	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.88	□□□□□ -0.19
GGA3-213	ENST00000582486	BARGIN	Q6ZT62	677 aa		13.88	□□□□□ -0.19
GGA3-213	ENST00000582486	TTLL7	Q6ZT98	887 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms