RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 PPM1GO15355 546 aaPredicted RBP10.62□□□□□ -0.71
CCDC47-205ENST00000582331 HSPA1AP0DMV8 641 aaKnown RBP10.62□□□□□ -0.71
CCDC47-205ENST00000582331 HSPA1BP0DMV9 641 aaKnown RBP10.62□□□□□ -0.71
CCDC47-205ENST00000582331 FBXO3Q9UK99 471 aa10.62□□□□□ -0.71
CCDC47-205ENST00000582331 EMILIN1Q9Y6C2 1016 aa10.62□□□□□ -0.71
CCDC47-205ENST00000582331 NCAPD2Q15021 1401 aa10.61□□□□□ -0.71
CCDC47-205ENST00000582331 SLC4A9Q96Q91 983 aa10.61□□□□□ -0.71
CCDC47-205ENST00000582331 EYA1Q99502 592 aa10.61□□□□□ -0.71
CCDC47-205ENST00000582331 ZBTB47Q9UFB7 747 aaPredicted RBP10.61□□□□□ -0.71
CCDC47-205ENST00000582331 BRCA1P38398 1863 aaKnown RBP10.61□□□□□ -0.71
CCDC47-205ENST00000582331 TONSLQ96HA7 1378 aa10.61□□□□□ -0.71
CCDC47-205ENST00000582331 ARFGEF1Q9Y6D6 1849 aa10.61□□□□□ -0.71
CCDC47-205ENST00000582331 CNTNAP4Q9C0A0 1308 aa10.6□□□□□ -0.71
CCDC47-205ENST00000582331 ERVV-2B6SEH9 535 aa10.6□□□□□ -0.71
CCDC47-205ENST00000582331 KDRP35968 1356 aa10.6□□□□□ -0.71
CCDC47-205ENST00000582331 WASHC2AQ641Q2 1341 aa10.59□□□□□ -0.71
CCDC47-205ENST00000582331 VEGFAP15692 232 aaPredicted RBP10.59□□□□□ -0.71
CCDC47-205ENST00000582331 CHRNA5P30532 468 aa10.59□□□□□ -0.71
CCDC47-205ENST00000582331 TNRC6CQ9HCJ0 1690 aaKnown RBP10.59□□□□□ -0.71
CCDC47-205ENST00000582331 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.71
CCDC47-205ENST00000582331 HSP90AB1P08238 724 aaKnown RBP10.58□□□□□ -0.72
CCDC47-205ENST00000582331 KIF20BQ96Q89 1820 aa10.58□□□□□ -0.72
CCDC47-205ENST00000582331 ZNF831Q5JPB2 1677 aa10.57□□□□□ -0.72
CCDC47-205ENST00000582331 GLTPD2A6NH11 291 aa10.57□□□□□ -0.72
CCDC47-205ENST00000582331 CABP4P57796 275 aa10.57□□□□□ -0.72
CCDC47-205ENST00000582331 DDR1Q08345 913 aa10.57□□□□□ -0.72
CCDC47-205ENST00000582331 CDCA8Q53HL2 280 aa10.57□□□□□ -0.72
CCDC47-205ENST00000582331 CARD14Q9BXL6 1004 aa10.57□□□□□ -0.72
CCDC47-205ENST00000582331 SRP68Q9UHB9 627 aaKnown RBP10.57□□□□□ -0.72
CCDC47-205ENST00000582331 LMNB1P20700 586 aa10.56□□□□□ -0.72
CCDC47-205ENST00000582331 TM4SF1P30408 202 aa10.56□□□□□ -0.72
CCDC47-205ENST00000582331 RASSF7Q02833 373 aa10.56□□□□□ -0.72
CCDC47-205ENST00000582331 USP42Q9H9J4 1324 aaKnown RBP10.56□□□□□ -0.72
CCDC47-205ENST00000582331 COL5A3P25940 1745 aaPredicted RBP10.55□□□□□ -0.72
CCDC47-205ENST00000582331 SBF1O95248 1867 aa10.55□□□□□ -0.72
CCDC47-205ENST00000582331 POLRMTO00411 1230 aaKnown RBP10.55□□□□□ -0.72
CCDC47-205ENST00000582331 PTCD1O75127 700 aaKnown RBP10.55□□□□□ -0.72
CCDC47-205ENST00000582331 CRKLP46109 303 aaKnown RBP10.55□□□□□ -0.72
CCDC47-205ENST00000582331 PLEKHO1Q53GL0 409 aaPredicted RBP10.55□□□□□ -0.72
CCDC47-205ENST00000582331 DCBLD2Q96PD2 775 aa10.55□□□□□ -0.72
CCDC47-205ENST00000582331 POLKQ9UBT6 870 aa10.55□□□□□ -0.72
CCDC47-205ENST00000582331 EIF4A2Q14240 407 aaKnown RBP10.54□□□□□ -0.72
CCDC47-205ENST00000582331 PHF12Q96QT6 1004 aa10.54□□□□□ -0.72
CCDC47-205ENST00000582331 MYH14Q7Z406 1995 aaKnown RBP10.54□□□□□ -0.72
CCDC47-205ENST00000582331 KDM6AO15550 1401 aaPredicted RBP10.53□□□□□ -0.72
CCDC47-205ENST00000582331 ZPR1O75312 459 aa10.53□□□□□ -0.72
CCDC47-205ENST00000582331 MTHFSP49914 203 aa10.53□□□□□ -0.72
CCDC47-205ENST00000582331 DPY19L2Q6NUT2 758 aa10.53□□□□□ -0.72
CCDC47-205ENST00000582331 TSPYL2Q9H2G4 693 aaPredicted RBP10.53□□□□□ -0.72
CCDC47-205ENST00000582331 AMOTQ4VCS5 1084 aa10.52□□□□□ -0.73
CCDC47-205ENST00000582331 USPL1Q5W0Q7 1092 aa10.52□□□□□ -0.73
CCDC47-205ENST00000582331 ZNF530Q6P9A1 599 aaPredicted RBP10.52□□□□□ -0.73
CCDC47-205ENST00000582331 INTS5Q6P9B9 1019 aaKnown RBP10.52□□□□□ -0.73
CCDC47-205ENST00000582331 TTLL6Q8N841 843 aa10.52□□□□□ -0.73
CCDC47-205ENST00000582331 NFATC2IPQ8NCF5 419 aa10.52□□□□□ -0.73
CCDC47-205ENST00000582331 ANKRD26Q9UPS8 1709 aa10.52□□□□□ -0.73
CCDC47-205ENST00000582331 POTECB2RU33 542 aa10.51□□□□□ -0.73
CCDC47-205ENST00000582331 GALR2O43603 387 aaPredicted RBP10.51□□□□□ -0.73
CCDC47-205ENST00000582331 POTEIP0CG38 1075 aa10.51□□□□□ -0.73
CCDC47-205ENST00000582331 C1orf141Q5JVX7 400 aa10.51□□□□□ -0.73
CCDC47-205ENST00000582331 MKRN1Q9UHC7 482 aaKnown RBP10.51□□□□□ -0.73
CCDC47-205ENST00000582331 H0YIN7 160 aa10.5□□□□□ -0.73
CCDC47-205ENST00000582331 NFIXQ14938 502 aa10.5□□□□□ -0.73
CCDC47-205ENST00000582331 C2CD5Q86YS7 1000 aa10.5□□□□□ -0.73
CCDC47-205ENST00000582331 PRDM10Q9NQV6 1147 aa10.5□□□□□ -0.73
CCDC47-205ENST00000582331 NFKBIEO00221 500 aa10.49□□□□□ -0.73
CCDC47-205ENST00000582331 FOXN1O15353 648 aa10.49□□□□□ -0.73
CCDC47-205ENST00000582331 SLC34A2O95436 690 aa10.49□□□□□ -0.73
CCDC47-205ENST00000582331 SERPINB2P05120 415 aa10.49□□□□□ -0.73
CCDC47-205ENST00000582331 TNNT2P45379 298 aaPredicted RBP10.49□□□□□ -0.73
CCDC47-205ENST00000582331 DNAJC10Q8IXB1 793 aa10.49□□□□□ -0.73
CCDC47-205ENST00000582331 NARFQ9UHQ1 456 aa10.49□□□□□ -0.73
CCDC47-205ENST00000582331 ERFEQ4G0M1 354 aa10.48□□□□□ -0.73
CCDC47-205ENST00000582331 PCGF6Q9BYE7 350 aa10.48□□□□□ -0.73
CCDC47-205ENST00000582331 SOS1Q07889 1333 aaPredicted RBP10.48□□□□□ -0.73
CCDC47-205ENST00000582331 CTCFP49711 727 aaPredicted RBP10.47□□□□□ -0.73
CCDC47-205ENST00000582331 RASEFQ8IZ41 740 aa10.47□□□□□ -0.73
CCDC47-205ENST00000582331 AIDAQ96BJ3 306 aa10.47□□□□□ -0.73
CCDC47-205ENST00000582331 TJP1Q07157 1748 aa10.47□□□□□ -0.73
CCDC47-205ENST00000582331 TIAM2Q8IVF5 1701 aa10.47□□□□□ -0.73
CCDC47-205ENST00000582331 CCDC88AQ3V6T2 1871 aa10.47□□□□□ -0.73
CCDC47-205ENST00000582331 C21orf2O43822 256 aa10.46□□□□□ -0.73
CCDC47-205ENST00000582331 CYP19A1P11511 503 aaPredicted RBP10.46□□□□□ -0.73
CCDC47-205ENST00000582331 ZNF622Q969S3 477 aaKnown RBP eCLIP10.46□□□□□ -0.73
CCDC47-205ENST00000582331 BCL2L12Q9HB09 334 aa10.46□□□□□ -0.73
CCDC47-205ENST00000582331 PDZRN3Q9UPQ7 1066 aa10.46□□□□□ -0.73
CCDC47-205ENST00000582331 CNTNAP1P78357 1384 aa10.46□□□□□ -0.74
CCDC47-205ENST00000582331 ADAMTS7Q9UKP4 1686 aa10.46□□□□□ -0.74
CCDC47-205ENST00000582331 AFDNP55196 1824 aaKnown RBP10.46□□□□□ -0.74
CCDC47-205ENST00000582331 DDNO94850 711 aaPredicted RBP10.45□□□□□ -0.74
CCDC47-205ENST00000582331 TRIM26Q12899 539 aaPredicted RBP10.45□□□□□ -0.74
CCDC47-205ENST00000582331 AEBP1Q8IUX7 1158 aa10.45□□□□□ -0.74
CCDC47-205ENST00000582331 DLEC1Q9Y238 1755 aa10.44□□□□□ -0.74
CCDC47-205ENST00000582331 NRXN2Q9P2S2 1712 aa10.44□□□□□ -0.74
CCDC47-205ENST00000582331 COL15A1P39059 1388 aa10.44□□□□□ -0.74
CCDC47-205ENST00000582331 POTEJP0CG39 1038 aa10.44□□□□□ -0.74
CCDC47-205ENST00000582331 PDE6BP35913 854 aa10.44□□□□□ -0.74
CCDC47-205ENST00000582331 VEGFBP49765 207 aa10.44□□□□□ -0.74
CCDC47-205ENST00000582331 NUBP1P53384 320 aa10.44□□□□□ -0.74
CCDC47-205ENST00000582331 SULT6B1Q6IMI4 303 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms