RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 COL15A1P39059 1388 aa19.6■□□□□ 0.73
CDC42EP4-208ENST00000582303 KDM2BQ8NHM5 1336 aa19.6■□□□□ 0.73
CDC42EP4-208ENST00000582303 A0A087WZG4 1122 aa19.6■□□□□ 0.73
CDC42EP4-208ENST00000582303 TEFQ10587 303 aa19.6■□□□□ 0.73
CDC42EP4-208ENST00000582303 U2SURPO15042 1029 aaKnown RBP19.59■□□□□ 0.73
CDC42EP4-208ENST00000582303 NPM2Q86SE8 214 aaKnown RBP19.59■□□□□ 0.73
CDC42EP4-208ENST00000582303 N4BP2Q86UW6 1770 aaPredicted RBP19.59■□□□□ 0.73
CDC42EP4-208ENST00000582303 KIAA1551Q9HCM1 1747 aa19.59■□□□□ 0.73
CDC42EP4-208ENST00000582303 GNAT3A8MTJ3 354 aa19.58■□□□□ 0.72
CDC42EP4-208ENST00000582303 ZBTB1Q9Y2K1 713 aa19.58■□□□□ 0.72
CDC42EP4-208ENST00000582303 TJP1Q07157 1748 aa19.58■□□□□ 0.72
CDC42EP4-208ENST00000582303 NFIXQ14938 502 aa19.57■□□□□ 0.72
CDC42EP4-208ENST00000582303 CFAP53Q96M91 514 aa19.57■□□□□ 0.72
CDC42EP4-208ENST00000582303 ZC3H4Q9UPT8 1303 aaKnown RBP19.56■□□□□ 0.72
CDC42EP4-208ENST00000582303 CHRNA5P30532 468 aa19.56■□□□□ 0.72
CDC42EP4-208ENST00000582303 RNF181Q9P0P0 153 aa19.56■□□□□ 0.72
CDC42EP4-208ENST00000582303 SERPINB2P05120 415 aa19.55■□□□□ 0.72
CDC42EP4-208ENST00000582303 CANXP27824 592 aaKnown RBP19.55■□□□□ 0.72
CDC42EP4-208ENST00000582303 RBM46Q8TBY0 533 aaKnown RBP19.55■□□□□ 0.72
CDC42EP4-208ENST00000582303 PDZRN3Q9UPQ7 1066 aa19.55■□□□□ 0.72
CDC42EP4-208ENST00000582303 KCPQ6ZWJ8 1503 aa19.55■□□□□ 0.72
CDC42EP4-208ENST00000582303 H0YIN7 160 aa19.54■□□□□ 0.72
CDC42EP4-208ENST00000582303 IFFO2Q5TF58 517 aa19.54■□□□□ 0.72
CDC42EP4-208ENST00000582303 ZNF790Q6PG37 636 aa19.54■□□□□ 0.72
CDC42EP4-208ENST00000582303 NMRK2Q9NPI5 230 aa19.54■□□□□ 0.72
CDC42EP4-208ENST00000582303 FSTL1Q12841 308 aa19.53■□□□□ 0.72
CDC42EP4-208ENST00000582303 TTLL6Q8N841 843 aa19.53■□□□□ 0.72
CDC42EP4-208ENST00000582303 NUDCQ9Y266 331 aa19.53■□□□□ 0.72
CDC42EP4-208ENST00000582303 EIF5P55010 431 aaKnown RBP19.52■□□□□ 0.72
CDC42EP4-208ENST00000582303 FMNL2Q96PY5 1086 aa19.52■□□□□ 0.72
CDC42EP4-208ENST00000582303 ARFGEF1Q9Y6D6 1849 aa19.52■□□□□ 0.72
CDC42EP4-208ENST00000582303 BRCA1P38398 1863 aaKnown RBP19.52■□□□□ 0.71
CDC42EP4-208ENST00000582303 LMNB1P20700 586 aa19.51■□□□□ 0.71
CDC42EP4-208ENST00000582303 IL6STP40189 918 aaPredicted RBP19.51■□□□□ 0.71
CDC42EP4-208ENST00000582303 ZNF496Q96IT1 587 aaPredicted RBP19.51■□□□□ 0.71
CDC42EP4-208ENST00000582303 HEG1Q9ULI3 1381 aa19.51■□□□□ 0.71
CDC42EP4-208ENST00000582303 ADAMTS7Q9UKP4 1686 aa19.51■□□□□ 0.71
CDC42EP4-208ENST00000582303 PDE6BP35913 854 aa19.5■□□□□ 0.71
CDC42EP4-208ENST00000582303 CNGB1Q14028 1251 aaPredicted RBP19.5■□□□□ 0.71
CDC42EP4-208ENST00000582303 C2CD5Q86YS7 1000 aa19.5■□□□□ 0.71
CDC42EP4-208ENST00000582303 IL17REQ8NFR9 667 aa19.5■□□□□ 0.71
CDC42EP4-208ENST00000582303 BCL2L12Q9HB09 334 aa19.5■□□□□ 0.71
CDC42EP4-208ENST00000582303 COL3A1P02461 1466 aaPredicted RBP19.48■□□□□ 0.71
CDC42EP4-208ENST00000582303 BTBD11A6QL63 1104 aa19.48■□□□□ 0.71
CDC42EP4-208ENST00000582303 NPHP1O15259 732 aa19.48■□□□□ 0.71
CDC42EP4-208ENST00000582303 BICDL1Q6ZP65 573 aa19.48■□□□□ 0.71
CDC42EP4-208ENST00000582303 RTF1Q92541 710 aaKnown RBP19.48■□□□□ 0.71
CDC42EP4-208ENST00000582303 ZNF330Q9Y3S2 320 aaPredicted RBP19.48■□□□□ 0.71
CDC42EP4-208ENST00000582303 CARMIL3Q8ND23 1372 aa19.47■□□□□ 0.71
CDC42EP4-208ENST00000582303 BRIP1Q9BX63 1249 aa19.47■□□□□ 0.71
CDC42EP4-208ENST00000582303 CEMIPQ8WUJ3 1361 aa19.46■□□□□ 0.71
CDC42EP4-208ENST00000582303 PRKAR2BP31323 418 aa19.46■□□□□ 0.71
CDC42EP4-208ENST00000582303 SMC1BQ8NDV3 1235 aa19.46■□□□□ 0.71
CDC42EP4-208ENST00000582303 SETDB2Q96T68 719 aa19.46■□□□□ 0.71
CDC42EP4-208ENST00000582303 RRAGCQ9HB90 399 aa19.46■□□□□ 0.71
CDC42EP4-208ENST00000582303 UBR2Q8IWV8 1755 aa19.44■□□□□ 0.7
CDC42EP4-208ENST00000582303 RASSF7Q02833 373 aa19.44■□□□□ 0.7
CDC42EP4-208ENST00000582303 TBC1D9BQ66K14 1250 aa19.44■□□□□ 0.7
CDC42EP4-208ENST00000582303 DPY19L2Q6NUT2 758 aa19.44■□□□□ 0.7
CDC42EP4-208ENST00000582303 RSPH6AQ9H0K4 717 aa19.44■□□□□ 0.7
CDC42EP4-208ENST00000582303 TBC1D2BQ9UPU7 963 aa19.44■□□□□ 0.7
CDC42EP4-208ENST00000582303 NRXN2Q9P2S2 1712 aa19.43■□□□□ 0.7
CDC42EP4-208ENST00000582303 GLTPD2A6NH11 291 aa19.43■□□□□ 0.7
CDC42EP4-208ENST00000582303 U2AF1L5P0DN76 240 aaPredicted RBP19.43■□□□□ 0.7
CDC42EP4-208ENST00000582303 VEGFAP15692 232 aaPredicted RBP19.43■□□□□ 0.7
CDC42EP4-208ENST00000582303 ST5P78524 1137 aa19.43■□□□□ 0.7
CDC42EP4-208ENST00000582303 U2AF1Q01081 240 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDC42EP4-208ENST00000582303 CNBD1Q8NA66 436 aa19.43■□□□□ 0.7
CDC42EP4-208ENST00000582303 ZNF622Q969S3 477 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDC42EP4-208ENST00000582303 ZNF652Q9Y2D9 606 aa19.43■□□□□ 0.7
CDC42EP4-208ENST00000582303 NEFMP07197 916 aa19.42■□□□□ 0.7
CDC42EP4-208ENST00000582303 SOGA3Q5TF21 947 aa19.42■□□□□ 0.7
CDC42EP4-208ENST00000582303 DNAJC5GQ8N7S2 189 aa19.42■□□□□ 0.7
CDC42EP4-208ENST00000582303 HTATSF1O43719 755 aaKnown RBP19.41■□□□□ 0.7
CDC42EP4-208ENST00000582303 SNRPA1P09661 255 aaKnown RBP19.41■□□□□ 0.7
CDC42EP4-208ENST00000582303 PRR5LQ6MZQ0 368 aa19.41■□□□□ 0.7
CDC42EP4-208ENST00000582303 CLEC4GQ6UXB4 293 aa19.41■□□□□ 0.7
CDC42EP4-208ENST00000582303 DZIP3Q86Y13 1208 aaKnown RBP19.41■□□□□ 0.7
CDC42EP4-208ENST00000582303 CNKSR1Q969H4 720 aa19.41■□□□□ 0.7
CDC42EP4-208ENST00000582303 PHACTR3Q96KR7 559 aa19.41■□□□□ 0.7
CDC42EP4-208ENST00000582303 A1BGP04217 495 aa19.4■□□□□ 0.7
CDC42EP4-208ENST00000582303 RGL2O15211 777 aa19.39■□□□□ 0.69
CDC42EP4-208ENST00000582303 CAMTA2O94983 1202 aa19.39■□□□□ 0.69
CDC42EP4-208ENST00000582303 KLRG1Q96E93 195 aa19.39■□□□□ 0.69
CDC42EP4-208ENST00000582303 TNRC6CQ9HCJ0 1690 aaKnown RBP19.39■□□□□ 0.69
CDC42EP4-208ENST00000582303 NFKBIEO00221 500 aa19.38■□□□□ 0.69
CDC42EP4-208ENST00000582303 PPP2R1AP30153 589 aa19.38■□□□□ 0.69
CDC42EP4-208ENST00000582303 AFDNP55196 1824 aaKnown RBP19.38■□□□□ 0.69
CDC42EP4-208ENST00000582303 VIRMAQ69YN4 1812 aaKnown RBP19.38■□□□□ 0.69
CDC42EP4-208ENST00000582303 STYK1Q6J9G0 422 aa19.38■□□□□ 0.69
CDC42EP4-208ENST00000582303 LTBP3Q9NS15 1303 aa19.37■□□□□ 0.69
CDC42EP4-208ENST00000582303 C21orf2O43822 256 aa19.37■□□□□ 0.69
CDC42EP4-208ENST00000582303 ERFEQ4G0M1 354 aa19.37■□□□□ 0.69
CDC42EP4-208ENST00000582303 TAOK3Q9H2K8 898 aa19.37■□□□□ 0.69
CDC42EP4-208ENST00000582303 NBPF5PQ86XG9 351 aaPredicted RBP19.36■□□□□ 0.69
CDC42EP4-208ENST00000582303 MASTLQ96GX5 879 aa19.36■□□□□ 0.69
CDC42EP4-208ENST00000582303 USP16Q9Y5T5 823 aa19.36■□□□□ 0.69
CDC42EP4-208ENST00000582303 DLEC1Q9Y238 1755 aa19.36■□□□□ 0.69
CDC42EP4-208ENST00000582303 SCN7AQ01118 1682 aa19.36■□□□□ 0.69
CDC42EP4-208ENST00000582303 TPTE2Q6XPS3 522 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms