RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 TTC5Q8N0Z6 440 aa19.37■□□□□ 0.69
CCDC57-214ENST00000582040 VSIG10Q8N0Z9 540 aa19.37■□□□□ 0.69
CCDC57-214ENST00000582040 GAS2L2Q8NHY3 880 aa19.37■□□□□ 0.69
CCDC57-214ENST00000582040 PIM2Q9P1W9 311 aa19.37■□□□□ 0.69
CCDC57-214ENST00000582040 AFDNP55196 1824 aaKnown RBP19.37■□□□□ 0.69
CCDC57-214ENST00000582040 NRXN2Q9P2S2 1712 aa19.37■□□□□ 0.69
CCDC57-214ENST00000582040 KIF3CO14782 793 aa19.36■□□□□ 0.69
CCDC57-214ENST00000582040 CHRNA5P30532 468 aa19.36■□□□□ 0.69
CCDC57-214ENST00000582040 TEFQ10587 303 aa19.36■□□□□ 0.69
CCDC57-214ENST00000582040 NARFQ9UHQ1 456 aa19.36■□□□□ 0.69
CCDC57-214ENST00000582040 GNAT3A8MTJ3 354 aa19.35■□□□□ 0.69
CCDC57-214ENST00000582040 SCN7AQ01118 1682 aa19.35■□□□□ 0.69
CCDC57-214ENST00000582040 CANXP27824 592 aaKnown RBP19.34■□□□□ 0.69
CCDC57-214ENST00000582040 NFIXQ14938 502 aa19.34■□□□□ 0.69
CCDC57-214ENST00000582040 DALRD3Q5D0E6 543 aaKnown RBP19.34■□□□□ 0.69
CCDC57-214ENST00000582040 CEP350Q5VT06 3117 aa19.34■□□□□ 0.69
CCDC57-214ENST00000582040 HEG1Q9ULI3 1381 aa19.33■□□□□ 0.69
CCDC57-214ENST00000582040 IL17REQ8NFR9 667 aa19.33■□□□□ 0.68
CCDC57-214ENST00000582040 ZNF496Q96IT1 587 aaPredicted RBP19.33■□□□□ 0.68
CCDC57-214ENST00000582040 BCL2L12Q9HB09 334 aa19.33■□□□□ 0.68
CCDC57-214ENST00000582040 DLEC1Q9Y238 1755 aa19.33■□□□□ 0.68
CCDC57-214ENST00000582040 HSPA6P17066 643 aa19.32■□□□□ 0.68
CCDC57-214ENST00000582040 PRKAR2BP31323 418 aa19.32■□□□□ 0.68
CCDC57-214ENST00000582040 C9orf131Q5VYM1 1079 aa19.32■□□□□ 0.68
CCDC57-214ENST00000582040 ZNF790Q6PG37 636 aa19.32■□□□□ 0.68
CCDC57-214ENST00000582040 CFAP53Q96M91 514 aa19.32■□□□□ 0.68
CCDC57-214ENST00000582040 CEMIPQ8WUJ3 1361 aa19.32■□□□□ 0.68
CCDC57-214ENST00000582040 STARD3NLO95772 234 aa19.31■□□□□ 0.68
CCDC57-214ENST00000582040 RSPH6AQ9H0K4 717 aa19.31■□□□□ 0.68
CCDC57-214ENST00000582040 CARMIL3Q8ND23 1372 aa19.31■□□□□ 0.68
CCDC57-214ENST00000582040 PHACTR3Q96KR7 559 aa19.3■□□□□ 0.68
CCDC57-214ENST00000582040 SERPINB2P05120 415 aa19.29■□□□□ 0.68
CCDC57-214ENST00000582040 EIF5P55010 431 aaKnown RBP19.29■□□□□ 0.68
CCDC57-214ENST00000582040 NMRK2Q9NPI5 230 aa19.29■□□□□ 0.68
CCDC57-214ENST00000582040 A0A087WZG4 1122 aa19.28■□□□□ 0.68
CCDC57-214ENST00000582040 BICDL1Q6ZP65 573 aa19.28■□□□□ 0.68
CCDC57-214ENST00000582040 RNF181Q9P0P0 153 aa19.28■□□□□ 0.68
CCDC57-214ENST00000582040 ZNF330Q9Y3S2 320 aaPredicted RBP19.28■□□□□ 0.68
CCDC57-214ENST00000582040 PPP2R1AP30153 589 aa19.27■□□□□ 0.68
CCDC57-214ENST00000582040 FMNL2Q96PY5 1086 aa19.27■□□□□ 0.68
CCDC57-214ENST00000582040 TEX13AQ9BXU3 409 aaPredicted RBP19.27■□□□□ 0.68
CCDC57-214ENST00000582040 NUDCQ9Y266 331 aa19.27■□□□□ 0.68
CCDC57-214ENST00000582040 BCORQ6W2J9 1755 aa19.26■□□□□ 0.67
CCDC57-214ENST00000582040 SBF1O95248 1867 aa19.26■□□□□ 0.67
CCDC57-214ENST00000582040 ANKRD31Q8N7Z5 1873 aa19.26■□□□□ 0.67
CCDC57-214ENST00000582040 KCNQ3O43525 872 aa19.25■□□□□ 0.67
CCDC57-214ENST00000582040 U2AF1L5P0DN76 240 aaPredicted RBP19.25■□□□□ 0.67
CCDC57-214ENST00000582040 U2AF1Q01081 240 aaKnown RBP eCLIP19.25■□□□□ 0.67
CCDC57-214ENST00000582040 RASSF7Q02833 373 aa19.25■□□□□ 0.67
CCDC57-214ENST00000582040 COL11A2P13942 1736 aaPredicted RBP19.25■□□□□ 0.67
CCDC57-214ENST00000582040 BTBD11A6QL63 1104 aa19.24■□□□□ 0.67
CCDC57-214ENST00000582040 TOMM70O94826 608 aa19.24■□□□□ 0.67
CCDC57-214ENST00000582040 IL6STP40189 918 aaPredicted RBP19.24■□□□□ 0.67
CCDC57-214ENST00000582040 TBC1D9BQ66K14 1250 aa19.24■□□□□ 0.67
CCDC57-214ENST00000582040 TBC1D2BQ9UPU7 963 aa19.24■□□□□ 0.67
CCDC57-214ENST00000582040 TNRC6CQ9HCJ0 1690 aaKnown RBP19.24■□□□□ 0.67
CCDC57-214ENST00000582040 A1BGP04217 495 aa19.23■□□□□ 0.67
CCDC57-214ENST00000582040 C2CD5Q86YS7 1000 aa19.23■□□□□ 0.67
CCDC57-214ENST00000582040 TIAM2Q8IVF5 1701 aa19.22■□□□□ 0.67
CCDC57-214ENST00000582040 TTLL6Q8N841 843 aa19.22■□□□□ 0.67
CCDC57-214ENST00000582040 KDM2BQ8NHM5 1336 aa19.22■□□□□ 0.67
CCDC57-214ENST00000582040 H0YIN7 160 aa19.21■□□□□ 0.67
CCDC57-214ENST00000582040 MCM10Q7L590 875 aa19.21■□□□□ 0.67
CCDC57-214ENST00000582040 NPM2Q86SE8 214 aaKnown RBP19.21■□□□□ 0.67
CCDC57-214ENST00000582040 RTF1Q92541 710 aaKnown RBP19.21■□□□□ 0.67
CCDC57-214ENST00000582040 PIP4K2AP48426 406 aaPredicted RBP19.2■□□□□ 0.66
CCDC57-214ENST00000582040 PRR5LQ6MZQ0 368 aa19.2■□□□□ 0.66
CCDC57-214ENST00000582040 CAMTA2O94983 1202 aa19.19■□□□□ 0.66
CCDC57-214ENST00000582040 DZIP3Q86Y13 1208 aaKnown RBP19.19■□□□□ 0.66
CCDC57-214ENST00000582040 C16orf71Q8IYS4 520 aaPredicted RBP19.19■□□□□ 0.66
CCDC57-214ENST00000582040 CCDC24Q8N4L8 307 aa19.19■□□□□ 0.66
CCDC57-214ENST00000582040 WDR90Q96KV7 1748 aa19.18■□□□□ 0.66
CCDC57-214ENST00000582040 PRAMEF22A3QJZ6 481 aa19.18■□□□□ 0.66
CCDC57-214ENST00000582040 APLP1P51693 650 aa19.18■□□□□ 0.66
CCDC57-214ENST00000582040 DCTN1Q14203 1278 aa19.18■□□□□ 0.66
CCDC57-214ENST00000582040 RBM46Q8TBY0 533 aaKnown RBP19.18■□□□□ 0.66
CCDC57-214ENST00000582040 USP16Q9Y5T5 823 aa19.18■□□□□ 0.66
CCDC57-214ENST00000582040 LAMB4A4D0S4 1761 aa19.17■□□□□ 0.66
CCDC57-214ENST00000582040 NFKBIEO00221 500 aa19.17■□□□□ 0.66
CCDC57-214ENST00000582040 LMNB1P20700 586 aa19.17■□□□□ 0.66
CCDC57-214ENST00000582040 PRELPP51888 382 aa19.17■□□□□ 0.66
CCDC57-214ENST00000582040 BRIP1Q9BX63 1249 aa19.17■□□□□ 0.66
CCDC57-214ENST00000582040 ZC3H4Q9UPT8 1303 aaKnown RBP19.17■□□□□ 0.66
CCDC57-214ENST00000582040 PDE6BP35913 854 aa19.16■□□□□ 0.66
CCDC57-214ENST00000582040 CNBD1Q8NA66 436 aa19.16■□□□□ 0.66
CCDC57-214ENST00000582040 ZNF622Q969S3 477 aaKnown RBP eCLIP19.16■□□□□ 0.66
CCDC57-214ENST00000582040 SETDB2Q96T68 719 aa19.16■□□□□ 0.66
CCDC57-214ENST00000582040 CACNA1SQ13698 1873 aa19.16■□□□□ 0.66
CCDC57-214ENST00000582040 NPHP1O15259 732 aa19.15■□□□□ 0.66
CCDC57-214ENST00000582040 SNRPA1P09661 255 aaKnown RBP19.15■□□□□ 0.66
CCDC57-214ENST00000582040 RRAGCQ9HB90 399 aa19.15■□□□□ 0.66
CCDC57-214ENST00000582040 PDZRN3Q9UPQ7 1066 aa19.15■□□□□ 0.66
CCDC57-214ENST00000582040 CCDC88AQ3V6T2 1871 aa19.15■□□□□ 0.66
CCDC57-214ENST00000582040 DLG5Q8TDM6 1919 aa19.15■□□□□ 0.66
CCDC57-214ENST00000582040 HTATSF1O43719 755 aaKnown RBP19.14■□□□□ 0.65
CCDC57-214ENST00000582040 ZNF219Q9P2Y4 722 aaPredicted RBP19.14■□□□□ 0.65
CCDC57-214ENST00000582040 KDM3BQ7LBC6 1761 aa19.14■□□□□ 0.65
CCDC57-214ENST00000582040 ARFGEF2Q9Y6D5 1785 aa19.14■□□□□ 0.65
CCDC57-214ENST00000582040 ST5P78524 1137 aa19.13■□□□□ 0.65
CCDC57-214ENST00000582040 FER1L6Q2WGJ9 1857 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms