RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 ACSBG1Q96GR2 724 aa9.37□□□□□ -0.91
TVP23C-208ENST00000581273 PIK3C2AO00443 1686 aa9.36□□□□□ -0.91
TVP23C-208ENST00000581273 MSL1Q68DK7 614 aa9.36□□□□□ -0.91
TVP23C-208ENST00000581273 SMAP1Q8IYB5 467 aaPredicted RBP9.36□□□□□ -0.91
TVP23C-208ENST00000581273 CDCA7Q9BWT1 371 aaPredicted RBP9.36□□□□□ -0.91
TVP23C-208ENST00000581273 GRPEL1Q9HAV7 217 aa9.36□□□□□ -0.91
TVP23C-208ENST00000581273 LRRC4BQ9NT99 713 aa9.36□□□□□ -0.91
TVP23C-208ENST00000581273 USP6P35125 1406 aa9.36□□□□□ -0.91
TVP23C-208ENST00000581273 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.35□□□□□ -0.91
TVP23C-208ENST00000581273 LBX1P52954 281 aa9.35□□□□□ -0.91
TVP23C-208ENST00000581273 PDE3AQ14432 1141 aa9.35□□□□□ -0.91
TVP23C-208ENST00000581273 CSPP1Q1MSJ5 1256 aa9.35□□□□□ -0.91
TVP23C-208ENST00000581273 QSER1Q2KHR3 1735 aa9.35□□□□□ -0.91
TVP23C-208ENST00000581273 ZNF579Q8NAF0 562 aaKnown RBP9.35□□□□□ -0.91
TVP23C-208ENST00000581273 SPRYD3Q8NCJ5 442 aa9.35□□□□□ -0.91
TVP23C-208ENST00000581273 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
TVP23C-208ENST00000581273 CFAP44Q96MT7 982 aa9.35□□□□□ -0.91
TVP23C-208ENST00000581273 GBP4Q96PP9 640 aa9.35□□□□□ -0.91
TVP23C-208ENST00000581273 CARD10Q9BWT7 1032 aa9.35□□□□□ -0.91
TVP23C-208ENST00000581273 CARD11Q9BXL7 1154 aa9.35□□□□□ -0.91
TVP23C-208ENST00000581273 SLIT3O75094 1523 aa9.35□□□□□ -0.91
TVP23C-208ENST00000581273 CPSF1Q10570 1443 aaKnown RBP9.34□□□□□ -0.91
TVP23C-208ENST00000581273 STK25O00506 426 aa9.34□□□□□ -0.91
TVP23C-208ENST00000581273 TRAK2O60296 914 aa9.34□□□□□ -0.91
TVP23C-208ENST00000581273 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
TVP23C-208ENST00000581273 GOLGA2Q08379 1002 aa9.34□□□□□ -0.91
TVP23C-208ENST00000581273 PAXIP1Q6ZW49 1069 aaPredicted RBP9.34□□□□□ -0.91
TVP23C-208ENST00000581273 ARHGEF25Q86VW2 580 aa9.34□□□□□ -0.91
TVP23C-208ENST00000581273 KIF12Q96FN5 646 aa9.34□□□□□ -0.91
TVP23C-208ENST00000581273 ANTXR1Q9H6X2 564 aa9.34□□□□□ -0.91
TVP23C-208ENST00000581273 NLRP2Q9NX02 1062 aa9.34□□□□□ -0.91
TVP23C-208ENST00000581273 TTC21BQ7Z4L5 1316 aa9.33□□□□□ -0.92
TVP23C-208ENST00000581273 EVC2Q86UK5 1308 aa9.33□□□□□ -0.92
TVP23C-208ENST00000581273 IGSF1Q8N6C5 1336 aa9.33□□□□□ -0.92
TVP23C-208ENST00000581273 GOLGA6L22H0YM25 854 aa9.33□□□□□ -0.92
TVP23C-208ENST00000581273 CD44P16070 742 aaKnown RBP9.33□□□□□ -0.92
TVP23C-208ENST00000581273 MSNP26038 577 aaKnown RBP9.33□□□□□ -0.92
TVP23C-208ENST00000581273 MCM5P33992 734 aa9.33□□□□□ -0.92
TVP23C-208ENST00000581273 NKX1-1Q15270 411 aaPredicted RBP9.33□□□□□ -0.92
TVP23C-208ENST00000581273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.33□□□□□ -0.926e-8■■■■□ 26.3
TVP23C-208ENST00000581273 KCNH5Q8NCM2 988 aa9.33□□□□□ -0.92
TVP23C-208ENST00000581273 RRAGCQ9HB90 399 aa9.33□□□□□ -0.92
TVP23C-208ENST00000581273 MKRN1Q9UHC7 482 aaKnown RBP9.33□□□□□ -0.92
TVP23C-208ENST00000581273 CD2APQ9Y5K6 639 aa9.33□□□□□ -0.92
TVP23C-208ENST00000581273 BTAF1O14981 1849 aa9.33□□□□□ -0.92
TVP23C-208ENST00000581273 C19orf67A6NJJ6 358 aa9.32□□□□□ -0.92
TVP23C-208ENST00000581273 OFD1O75665 1012 aa9.32□□□□□ -0.92
TVP23C-208ENST00000581273 RGS3P49796 1198 aa9.32□□□□□ -0.92
TVP23C-208ENST00000581273 WDR43Q15061 677 aaKnown RBP eCLIP9.32□□□□□ -0.92
TVP23C-208ENST00000581273 ZSCAN30Q86W11 494 aa9.32□□□□□ -0.92
TVP23C-208ENST00000581273 SMC1BQ8NDV3 1235 aa9.32□□□□□ -0.92
TVP23C-208ENST00000581273 TBC1D32Q96NH3 1257 aa9.32□□□□□ -0.92
TVP23C-208ENST00000581273 TFCP2L1Q9NZI6 479 aa9.32□□□□□ -0.92
TVP23C-208ENST00000581273 KCNQ4P56696 695 aa9.31□□□□□ -0.92
TVP23C-208ENST00000581273 PDAP1Q13442 181 aaKnown RBP9.31□□□□□ -0.92
TVP23C-208ENST00000581273 UTP14CQ5TAP6 766 aaKnown RBP9.31□□□□□ -0.92
TVP23C-208ENST00000581273 HSCBQ8IWL3 235 aa9.31□□□□□ -0.92
TVP23C-208ENST00000581273 AIDAQ96BJ3 306 aa9.31□□□□□ -0.92
TVP23C-208ENST00000581273 NHSQ6T4R5 1651 aa9.31□□□□□ -0.92
TVP23C-208ENST00000581273 LTN1O94822 1766 aa9.31□□□□□ -0.92
TVP23C-208ENST00000581273 KCPQ6ZWJ8 1503 aa9.31□□□□□ -0.92
TVP23C-208ENST00000581273 BCL9O00512 1426 aa9.31□□□□□ -0.92
TVP23C-208ENST00000581273 IBTKQ9P2D0 1353 aaPredicted RBP9.3□□□□□ -0.92
TVP23C-208ENST00000581273 MAP3K13O43283 966 aa9.3□□□□□ -0.92
TVP23C-208ENST00000581273 PLIN1O60240 522 aa9.3□□□□□ -0.92
TVP23C-208ENST00000581273 TAF3Q5VWG9 929 aa9.3□□□□□ -0.92
TVP23C-208ENST00000581273 KIAA1211Q6ZU35 1233 aa9.3□□□□□ -0.92
TVP23C-208ENST00000581273 SLKQ9H2G2 1235 aaPredicted RBP9.3□□□□□ -0.92
TVP23C-208ENST00000581273 PCDHB8Q9UN66 801 aa9.3□□□□□ -0.92
TVP23C-208ENST00000581273 PCDHB13Q9Y5F0 798 aa9.3□□□□□ -0.92
TVP23C-208ENST00000581273 TRPM1Q7Z4N2 1603 aa9.3□□□□□ -0.92
TVP23C-208ENST00000581273 CICQ96RK0 1608 aaPredicted RBP9.3□□□□□ -0.92
TVP23C-208ENST00000581273 E9PSI1 815 aa9.29□□□□□ -0.92
TVP23C-208ENST00000581273 DYNC1I1O14576 645 aa9.29□□□□□ -0.92
TVP23C-208ENST00000581273 IL2RBP14784 551 aa9.29□□□□□ -0.92
TVP23C-208ENST00000581273 CDCA8Q53HL2 280 aa9.29□□□□□ -0.92
TVP23C-208ENST00000581273 IFNL1Q8IU54 200 aa9.29□□□□□ -0.92
TVP23C-208ENST00000581273 DDX54Q8TDD1 881 aaKnown RBP9.29□□□□□ -0.92
TVP23C-208ENST00000581273 LTV1Q96GA3 475 aaPredicted RBP9.29□□□□□ -0.92
TVP23C-208ENST00000581273 CDCA7LQ96GN5 454 aa9.29□□□□□ -0.92
TVP23C-208ENST00000581273 PPP1R9BQ96SB3 815 aa9.29□□□□□ -0.92
TVP23C-208ENST00000581273 TTC21AQ8NDW8 1320 aa9.29□□□□□ -0.92
TVP23C-208ENST00000581273 VIRMAQ69YN4 1812 aaKnown RBP9.28□□□□□ -0.92
TVP23C-208ENST00000581273 NFAT5O94916 1531 aa9.28□□□□□ -0.92
TVP23C-208ENST00000581273 GTPBP6O43824 516 aaPredicted RBP9.28□□□□□ -0.92
TVP23C-208ENST00000581273 DUSP27Q5VZP5 1158 aa9.28□□□□□ -0.92
TVP23C-208ENST00000581273 NME9Q86XW9 330 aa9.28□□□□□ -0.92
TVP23C-208ENST00000581273 SYTL4Q96C24 671 aaPredicted RBP9.28□□□□□ -0.92
TVP23C-208ENST00000581273 STK24Q9Y6E0 443 aa9.28□□□□□ -0.92
TVP23C-208ENST00000581273 HSPA8P11142 646 aaKnown RBP9.27□□□□□ -0.93
TVP23C-208ENST00000581273 ANKRD24Q8TF21 1146 aa9.27□□□□□ -0.93
TVP23C-208ENST00000581273 CLUAP1Q96AJ1 413 aa9.27□□□□□ -0.93
TVP23C-208ENST00000581273 TBC1D2Q9BYX2 928 aa9.27□□□□□ -0.93
TVP23C-208ENST00000581273 RWDD1Q9H446 243 aaPredicted RBP9.27□□□□□ -0.93
TVP23C-208ENST00000581273 ABCC6O95255 1503 aa9.26□□□□□ -0.93
TVP23C-208ENST00000581273 ST20-MTHFSA0A0A6YYL1 179 aa9.26□□□□□ -0.93
TVP23C-208ENST00000581273 DLL1O00548 723 aa9.26□□□□□ -0.93
TVP23C-208ENST00000581273 PSEN1P49768 467 aa9.26□□□□□ -0.93
TVP23C-208ENST00000581273 TMF1P82094 1093 aa9.26□□□□□ -0.93
TVP23C-208ENST00000581273 RBM10P98175 930 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms