RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 GCP02774 474 aa11.45□□□□□ -0.58
SUPT4H1-206ENST00000581204 PTGDRQ13258 359 aa11.45□□□□□ -0.58
SUPT4H1-206ENST00000581204 CCDC102AQ96A19 550 aa11.45□□□□□ -0.58
SUPT4H1-206ENST00000581204 PUS7Q96PZ0 661 aaKnown RBP11.45□□□□□ -0.58
SUPT4H1-206ENST00000581204 KDM4CQ9H3R0 1056 aa11.45□□□□□ -0.58
SUPT4H1-206ENST00000581204 PCDH10Q9P2E7 1040 aa11.45□□□□□ -0.58
SUPT4H1-206ENST00000581204 ABCC6O95255 1503 aa11.45□□□□□ -0.58
SUPT4H1-206ENST00000581204 HTRA3P83110 453 aa11.44□□□□□ -0.58
SUPT4H1-206ENST00000581204 FBXW7Q969H0 707 aa11.44□□□□□ -0.58
SUPT4H1-206ENST00000581204 CDK19Q9BWU1 502 aa11.44□□□□□ -0.58
SUPT4H1-206ENST00000581204 PCDHGA4Q9Y5G9 962 aa11.44□□□□□ -0.58
SUPT4H1-206ENST00000581204 CICQ96RK0 1608 aaPredicted RBP11.44□□□□□ -0.58
SUPT4H1-206ENST00000581204 AMHR2Q16671 573 aa11.43□□□□□ -0.58
SUPT4H1-206ENST00000581204 KNSTRNQ9Y448 316 aa11.43□□□□□ -0.58
SUPT4H1-206ENST00000581204 BRD4O60885 1362 aaPredicted RBP11.42□□□□□ -0.58
SUPT4H1-206ENST00000581204 ACEP12821 1306 aa11.42□□□□□ -0.58
SUPT4H1-206ENST00000581204 WDR17Q8IZU2 1322 aa11.42□□□□□ -0.58
SUPT4H1-206ENST00000581204 MAP3K7O43318 606 aa11.42□□□□□ -0.58
SUPT4H1-206ENST00000581204 TYW1BQ6NUM6 668 aa11.42□□□□□ -0.58
SUPT4H1-206ENST00000581204 TOM1L2Q6ZVM7 507 aa11.42□□□□□ -0.58
SUPT4H1-206ENST00000581204 NUDT16Q96DE0 195 aaKnown RBP11.42□□□□□ -0.58
SUPT4H1-206ENST00000581204 CDCA7Q9BWT1 371 aaPredicted RBP11.42□□□□□ -0.58
SUPT4H1-206ENST00000581204 USP6P35125 1406 aa11.42□□□□□ -0.58
SUPT4H1-206ENST00000581204 RIMBP2O15034 1052 aa11.41□□□□□ -0.58
SUPT4H1-206ENST00000581204 TOMM70O94826 608 aa11.41□□□□□ -0.58
SUPT4H1-206ENST00000581204 DOK7Q18PE1 504 aa11.41□□□□□ -0.58
SUPT4H1-206ENST00000581204 ABTB2Q8N961 1025 aa11.41□□□□□ -0.58
SUPT4H1-206ENST00000581204 SLAIN1Q8ND83 568 aa11.41□□□□□ -0.58
SUPT4H1-206ENST00000581204 ACSBG1Q96GR2 724 aa11.41□□□□□ -0.58
SUPT4H1-206ENST00000581204 SLC12A5Q9H2X9 1139 aa11.41□□□□□ -0.58
SUPT4H1-206ENST00000581204 PRKRIP1Q9H875 184 aaPredicted RBP11.41□□□□□ -0.58
SUPT4H1-206ENST00000581204 AXIN2Q9Y2T1 843 aa11.41□□□□□ -0.58
SUPT4H1-206ENST00000581204 CCER2I3L3R5 266 aa11.4□□□□□ -0.58
SUPT4H1-206ENST00000581204 KTN1Q86UP2 1357 aaKnown RBP11.4□□□□□ -0.59
SUPT4H1-206ENST00000581204 RGPD5Q99666 1765 aa11.39□□□□□ -0.59
SUPT4H1-206ENST00000581204 PER1O15534 1290 aaPredicted RBP11.39□□□□□ -0.59
SUPT4H1-206ENST00000581204 CC2D1BQ5T0F9 858 aaKnown RBP11.39□□□□□ -0.59
SUPT4H1-206ENST00000581204 DDRGK1Q96HY6 314 aa11.39□□□□□ -0.59
SUPT4H1-206ENST00000581204 WWC3Q9ULE0 1092 aa11.39□□□□□ -0.59
SUPT4H1-206ENST00000581204 CPSF1Q10570 1443 aaKnown RBP11.38□□□□□ -0.59
SUPT4H1-206ENST00000581204 PLEKHG3A1L390 1219 aa11.38□□□□□ -0.59
SUPT4H1-206ENST00000581204 RALBP1Q15311 655 aa11.38□□□□□ -0.59
SUPT4H1-206ENST00000581204 HDGFL2Q7Z4V5 671 aaPredicted RBP11.38□□□□□ -0.59
SUPT4H1-206ENST00000581204 CARD10Q9BWT7 1032 aa11.38□□□□□ -0.59
SUPT4H1-206ENST00000581204 ZSWIM6Q9HCJ5 1215 aa11.38□□□□□ -0.59
SUPT4H1-206ENST00000581204 TERF2IPQ9NYB0 399 aa11.38□□□□□ -0.59
SUPT4H1-206ENST00000581204 PPIP5K1Q6PFW1 1433 aa11.37□□□□□ -0.59
SUPT4H1-206ENST00000581204 PRIM1P49642 420 aaKnown RBP11.37□□□□□ -0.59
SUPT4H1-206ENST00000581204 MAMSTRQ6ZN01 415 aa11.37□□□□□ -0.59
SUPT4H1-206ENST00000581204 NLRP13Q86W25 1043 aa11.37□□□□□ -0.59
SUPT4H1-206ENST00000581204 PCDHGA10Q9Y5H3 936 aa11.37□□□□□ -0.59
SUPT4H1-206ENST00000581204 CD2APQ9Y5K6 639 aa11.37□□□□□ -0.59
SUPT4H1-206ENST00000581204 ANKRD36BQ8N2N9 1353 aa11.37□□□□□ -0.59
SUPT4H1-206ENST00000581204 LY75O60449 1722 aa11.37□□□□□ -0.59
SUPT4H1-206ENST00000581204 PIK3C2AO00443 1686 aa11.36□□□□□ -0.59
SUPT4H1-206ENST00000581204 EXOC5O00471 708 aa11.36□□□□□ -0.59
SUPT4H1-206ENST00000581204 SLC27A3Q5K4L6 730 aa11.36□□□□□ -0.59
SUPT4H1-206ENST00000581204 CABP1Q9NZU7 370 aa11.36□□□□□ -0.59
SUPT4H1-206ENST00000581204 NSD3Q9BZ95 1437 aa11.35□□□□□ -0.59
SUPT4H1-206ENST00000581204 ZBTB7CA1YPR0 619 aa11.35□□□□□ -0.59
SUPT4H1-206ENST00000581204 KCNQ4P56696 695 aa11.35□□□□□ -0.59
SUPT4H1-206ENST00000581204 IL27Q8NEV9 243 aa11.35□□□□□ -0.59
SUPT4H1-206ENST00000581204 YTHDC1Q96MU7 727 aaKnown RBP11.35□□□□□ -0.59
SUPT4H1-206ENST00000581204 CARD14Q9BXL6 1004 aa11.35□□□□□ -0.59
SUPT4H1-206ENST00000581204 NMRK2Q9NPI5 230 aa11.35□□□□□ -0.59
SUPT4H1-206ENST00000581204 HSPA1AP0DMV8 641 aaKnown RBP11.34□□□□□ -0.59
SUPT4H1-206ENST00000581204 HSPA1BP0DMV9 641 aaKnown RBP11.34□□□□□ -0.59
SUPT4H1-206ENST00000581204 MSL1Q68DK7 614 aa11.34□□□□□ -0.59
SUPT4H1-206ENST00000581204 COL23A1Q86Y22 540 aaPredicted RBP11.34□□□□□ -0.59
SUPT4H1-206ENST00000581204 RBM46Q8TBY0 533 aaKnown RBP11.34□□□□□ -0.59
SUPT4H1-206ENST00000581204 MRS2Q9HD23 443 aa11.34□□□□□ -0.59
SUPT4H1-206ENST00000581204 SCUBE2Q9NQ36 999 aa11.34□□□□□ -0.59
SUPT4H1-206ENST00000581204 TFCP2L1Q9NZI6 479 aa11.34□□□□□ -0.59
SUPT4H1-206ENST00000581204 CGNL1Q0VF96 1302 aa11.34□□□□□ -0.59
SUPT4H1-206ENST00000581204 MYBBP1AQ9BQG0 1328 aaKnown RBP11.34□□□□□ -0.59
SUPT4H1-206ENST00000581204 A0A1W2PP64 1363 aa11.33□□□□□ -0.6
SUPT4H1-206ENST00000581204 NPC1L1Q9UHC9 1359 aa11.33□□□□□ -0.6
SUPT4H1-206ENST00000581204 FECHP22830 423 aa11.33□□□□□ -0.6
SUPT4H1-206ENST00000581204 FOSBP53539 338 aa11.33□□□□□ -0.6
SUPT4H1-206ENST00000581204 TTLL12Q14166 644 aaPredicted RBP11.33□□□□□ -0.6
SUPT4H1-206ENST00000581204 PARP9Q8IXQ6 854 aa11.33□□□□□ -0.6
SUPT4H1-206ENST00000581204 IGSF1Q8N6C5 1336 aa11.33□□□□□ -0.6
SUPT4H1-206ENST00000581204 NSD2O96028 1365 aa11.32□□□□□ -0.6
SUPT4H1-206ENST00000581204 NFAT5O94916 1531 aa11.32□□□□□ -0.6
SUPT4H1-206ENST00000581204 ARHGEF25Q86VW2 580 aa11.32□□□□□ -0.6
SUPT4H1-206ENST00000581204 NPDC1Q9NQX5 325 aaPredicted RBP11.32□□□□□ -0.6
SUPT4H1-206ENST00000581204 USP54Q70EL1 1684 aa11.32□□□□□ -0.6
SUPT4H1-206ENST00000581204 KIAA1551Q9HCM1 1747 aa11.32□□□□□ -0.6
SUPT4H1-206ENST00000581204 ZDHHC16Q969W1 377 aa11.31□□□□□ -0.6
SUPT4H1-206ENST00000581204 CDHR5Q9HBB8 845 aa11.31□□□□□ -0.6
SUPT4H1-206ENST00000581204 MORC1Q86VD1 984 aa11.3□□□□□ -0.6
SUPT4H1-206ENST00000581204 RBM27Q9P2N5 1060 aaKnown RBP11.3□□□□□ -0.6
SUPT4H1-206ENST00000581204 CD163L1Q9NR16 1453 aa11.3□□□□□ -0.6
SUPT4H1-206ENST00000581204 DOT1LQ8TEK3 1739 aa11.29□□□□□ -0.6
SUPT4H1-206ENST00000581204 TOGARAM1Q9Y4F4 1720 aa11.29□□□□□ -0.6
SUPT4H1-206ENST00000581204 FSTL1Q12841 308 aa11.29□□□□□ -0.6
SUPT4H1-206ENST00000581204 CCDC184Q52MB2 194 aa11.29□□□□□ -0.6
SUPT4H1-206ENST00000581204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.29□□□□□ -0.6
SUPT4H1-206ENST00000581204 C10orf71Q711Q0 1435 aa11.28□□□□□ -0.6
SUPT4H1-206ENST00000581204 CLCN1P35523 988 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms