RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 RGS17Q9UGC6 210 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-219ENST00000580670 USP16Q9Y5T5 823 aa17.64■□□□□ 0.41
CDK5RAP3-219ENST00000580670 KRT27Q7Z3Y8 459 aa17.63■□□□□ 0.41
CDK5RAP3-219ENST00000580670 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-219ENST00000580670 API5Q9BZZ5 524 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-219ENST00000580670 DBF4Q9UBU7 674 aaPredicted RBP17.63■□□□□ 0.41
CDK5RAP3-219ENST00000580670 PTPRCP08575 1304 aa17.63■□□□□ 0.41
CDK5RAP3-219ENST00000580670 COG6Q9Y2V7 657 aa17.63■□□□□ 0.41
CDK5RAP3-219ENST00000580670 LAMB4A4D0S4 1761 aa17.62■□□□□ 0.41
CDK5RAP3-219ENST00000580670 FLIIQ13045 1269 aa17.62■□□□□ 0.41
CDK5RAP3-219ENST00000580670 VSIG10Q8N0Z9 540 aa17.62■□□□□ 0.41
CDK5RAP3-219ENST00000580670 ANP32EQ9BTT0 268 aa17.62■□□□□ 0.41
CDK5RAP3-219ENST00000580670 BRWD3Q6RI45 1802 aa17.62■□□□□ 0.41
CDK5RAP3-219ENST00000580670 ANXA1P04083 346 aa17.61■□□□□ 0.41
CDK5RAP3-219ENST00000580670 POTEAQ6S8J7 498 aa17.61■□□□□ 0.41
CDK5RAP3-219ENST00000580670 PHAXQ9H814 394 aaKnown RBP17.61■□□□□ 0.41
CDK5RAP3-219ENST00000580670 DDX21Q9NR30 783 aaKnown RBP eCLIP17.61■□□□□ 0.41
CDK5RAP3-219ENST00000580670 NHSQ6T4R5 1651 aa17.6■□□□□ 0.41
CDK5RAP3-219ENST00000580670 FKBP5Q13451 457 aaPredicted RBP17.6■□□□□ 0.41
CDK5RAP3-219ENST00000580670 PROSER3Q2NL68 480 aa17.6■□□□□ 0.41
CDK5RAP3-219ENST00000580670 SMARCC1Q92922 1105 aaPredicted RBP17.6■□□□□ 0.41
CDK5RAP3-219ENST00000580670 MVPQ14764 893 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 PDIA6Q15084 440 aa17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 PTF1AQ7RTS3 328 aa17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 TMEM57Q8N5G2 664 aa17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 TEX13AQ9BXU3 409 aaPredicted RBP17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 HYPKQ9NX55 129 aa17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 ABCC4O15439 1325 aa17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 RGS12O14924 1447 aa17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 FAM196AQ6ZSG2 479 aa17.58■□□□□ 0.41
CDK5RAP3-219ENST00000580670 ITPRIPQ8IWB1 547 aa17.58■□□□□ 0.41
CDK5RAP3-219ENST00000580670 DNAJC10Q8IXB1 793 aa17.58■□□□□ 0.41
CDK5RAP3-219ENST00000580670 PALLDQ8WX93 1383 aa17.58■□□□□ 0.41
CDK5RAP3-219ENST00000580670 SLC4A9Q96Q91 983 aa17.58■□□□□ 0.41
CDK5RAP3-219ENST00000580670 PPP4R2Q9NY27 417 aa17.58■□□□□ 0.41
CDK5RAP3-219ENST00000580670 SBF2Q86WG5 1849 aa17.58■□□□□ 0.4
CDK5RAP3-219ENST00000580670 MYL6BP14649 208 aa17.58■□□□□ 0.4
CDK5RAP3-219ENST00000580670 ERBB4Q15303 1308 aa17.57■□□□□ 0.4
CDK5RAP3-219ENST00000580670 BTAF1O14981 1849 aa17.56■□□□□ 0.4
CDK5RAP3-219ENST00000580670 LOC102724428A0A0B4J2F2 783 aa17.56■□□□□ 0.4
CDK5RAP3-219ENST00000580670 PIP4K2AP48426 406 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP3-219ENST00000580670 SIK1P57059 783 aa17.56■□□□□ 0.4
CDK5RAP3-219ENST00000580670 F6X3S4 739 aa17.56■□□□□ 0.4
CDK5RAP3-219ENST00000580670 STARD3NLO95772 234 aa17.56■□□□□ 0.4
CDK5RAP3-219ENST00000580670 A1BGP04217 495 aa17.56■□□□□ 0.4
CDK5RAP3-219ENST00000580670 ATP6V1AP38606 617 aa17.55■□□□□ 0.4
CDK5RAP3-219ENST00000580670 DDX19BQ9UMR2 479 aa17.55■□□□□ 0.4
CDK5RAP3-219ENST00000580670 NBPF26B4DH59 902 aa17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 AIMP1Q12904 312 aaKnown RBP17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 NBPF14Q5TI25 921 aa17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 NBPF10Q6P3W6 841 aaKnown RBP17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 SLC4A10Q6U841 1118 aa17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 ILDR1Q86SU0 546 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 NBPF15Q8N660 670 aa17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 BCL11BQ9C0K0 894 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 TJP1Q07157 1748 aa17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 INTS3Q68E01 1043 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-219ENST00000580670 LRP10Q7Z4F1 713 aa17.53■□□□□ 0.4
CDK5RAP3-219ENST00000580670 XAGE3Q8WTP9 111 aa17.53■□□□□ 0.4
CDK5RAP3-219ENST00000580670 DDX58O95786 925 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-219ENST00000580670 CYP19A1P11511 503 aaPredicted RBP17.53■□□□□ 0.4
CDK5RAP3-219ENST00000580670 PI4KAP2A4QPH2 592 aa17.52■□□□□ 0.4
CDK5RAP3-219ENST00000580670 COPS6Q7L5N1 327 aa17.52■□□□□ 0.4
CDK5RAP3-219ENST00000580670 PI4KAP1Q8N8J0 262 aa17.52■□□□□ 0.4
CDK5RAP3-219ENST00000580670 CCT4P50991 539 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ITPK1Q13572 414 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 AAMPQ13685 434 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 B4GALNT3Q6L9W6 998 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 DNAAF4Q8WXU2 420 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 CCDC136Q96JN2 1154 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ADCY9O60503 1353 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 TRIM37O94972 964 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 KSR2Q6VAB6 950 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 CICQ96RK0 1608 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-219ENST00000580670 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-219ENST00000580670 MAP3K2Q9Y2U5 619 aa17.5■□□□□ 0.39
CDK5RAP3-219ENST00000580670 PXDNLA1KZ92 1463 aa17.5■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ZNF831Q5JPB2 1677 aa17.49■□□□□ 0.39
CDK5RAP3-219ENST00000580670 RIC3Q7Z5B4 369 aa17.49■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ZBTB7BO15156 539 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ZBTB1Q9Y2K1 713 aa17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ZNF330Q9Y3S2 320 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 CRKLP46109 303 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 KCNQ4P56696 695 aa17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ANKRD13DQ6ZTN6 518 aa17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ZBTB40Q9NUA8 1239 aa17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 CCDC87Q9NVE4 849 aa17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-219ENST00000580670 LY75O60449 1722 aa17.46■□□□□ 0.39
CDK5RAP3-219ENST00000580670 BEND3Q5T5X7 828 aa17.46■□□□□ 0.39
CDK5RAP3-219ENST00000580670 INTS5Q6P9B9 1019 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-219ENST00000580670 TTLL7Q6ZT98 887 aa17.46■□□□□ 0.39
CDK5RAP3-219ENST00000580670 LINC00116Q8NCU8 138 aa17.46■□□□□ 0.39
CDK5RAP3-219ENST00000580670 SRCIN1Q9C0H9 1055 aa17.46■□□□□ 0.39
CDK5RAP3-219ENST00000580670 N4BP2Q86UW6 1770 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-219ENST00000580670 PLBD2Q8NHP8 589 aa17.45■□□□□ 0.38
CDK5RAP3-219ENST00000580670 COL5A3P25940 1745 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-219ENST00000580670 ATP10DQ9P241 1426 aa17.45■□□□□ 0.38
CDK5RAP3-219ENST00000580670 IL6STP40189 918 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-219ENST00000580670 EP400Q96L91 3159 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms