RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 CYP19A1P11511 503 aaPredicted RBP13□□□□□ -0.33
GGA3-209ENST00000580646 GYS1P13807 737 aa13□□□□□ -0.33
GGA3-209ENST00000580646 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
GGA3-209ENST00000580646 TTC5Q8N0Z6 440 aa13□□□□□ -0.33
GGA3-209ENST00000580646 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
GGA3-209ENST00000580646 CCDC87Q9NVE4 849 aa13□□□□□ -0.33
GGA3-209ENST00000580646 RIPK4P57078 832 aa12.99□□□□□ -0.33
GGA3-209ENST00000580646 NGEFQ8N5V2 710 aa12.99□□□□□ -0.33
GGA3-209ENST00000580646 CHD4Q14839 1912 aa12.99□□□□□ -0.33
GGA3-209ENST00000580646 COL5A3P25940 1745 aaPredicted RBP12.99□□□□□ -0.33
GGA3-209ENST00000580646 ZNF790Q6PG37 636 aa12.98□□□□□ -0.33
GGA3-209ENST00000580646 APAF1O14727 1248 aa12.97□□□□□ -0.33
GGA3-209ENST00000580646 GRIN3BO60391 1043 aa12.97□□□□□ -0.33
GGA3-209ENST00000580646 YBX3P16989 372 aaKnown RBP eCLIP12.97□□□□□ -0.33
GGA3-209ENST00000580646 CCDC27Q2M243 656 aa12.97□□□□□ -0.33
GGA3-209ENST00000580646 FAM9BQ8IZU0 186 aa12.97□□□□□ -0.33
GGA3-209ENST00000580646 ZNF496Q96IT1 587 aaPredicted RBP12.97□□□□□ -0.33
GGA3-209ENST00000580646 SRP68Q9UHB9 627 aaKnown RBP12.97□□□□□ -0.33
GGA3-209ENST00000580646 KCPQ6ZWJ8 1503 aa12.97□□□□□ -0.33
GGA3-209ENST00000580646 MYH14Q7Z406 1995 aaKnown RBP12.96□□□□□ -0.33
GGA3-209ENST00000580646 SOS1Q07889 1333 aaPredicted RBP12.96□□□□□ -0.33
GGA3-209ENST00000580646 USP42Q9H9J4 1324 aaKnown RBP12.96□□□□□ -0.33
GGA3-209ENST00000580646 BTBD11A6QL63 1104 aa12.96□□□□□ -0.33
GGA3-209ENST00000580646 STARD3NLO95772 234 aa12.96□□□□□ -0.33
GGA3-209ENST00000580646 TEX13AQ9BXU3 409 aaPredicted RBP12.96□□□□□ -0.33
GGA3-209ENST00000580646 BABAM1Q9NWV8 329 aa12.96□□□□□ -0.33
GGA3-209ENST00000580646 ZBTB1Q9Y2K1 713 aa12.96□□□□□ -0.33
GGA3-209ENST00000580646 PARP3Q9Y6F1 533 aa12.96□□□□□ -0.33
GGA3-209ENST00000580646 TJP1Q07157 1748 aa12.96□□□□□ -0.34
GGA3-209ENST00000580646 KCNQ3O43525 872 aa12.95□□□□□ -0.34
GGA3-209ENST00000580646 ZPR1O75312 459 aa12.95□□□□□ -0.34
GGA3-209ENST00000580646 FKBP8Q14318 412 aa12.95□□□□□ -0.34
GGA3-209ENST00000580646 MCM10Q7L590 875 aa12.95□□□□□ -0.34
GGA3-209ENST00000580646 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
GGA3-209ENST00000580646 TRIM35Q9UPQ4 493 aa12.95□□□□□ -0.34
GGA3-209ENST00000580646 HEG1Q9ULI3 1381 aa12.94□□□□□ -0.34
GGA3-209ENST00000580646 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
GGA3-209ENST00000580646 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
GGA3-209ENST00000580646 CANXP27824 592 aaKnown RBP12.94□□□□□ -0.34
GGA3-209ENST00000580646 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
GGA3-209ENST00000580646 TAF7Q15545 349 aaPredicted RBP12.94□□□□□ -0.34
GGA3-209ENST00000580646 GOLGB1Q14789 3259 aaKnown RBP12.94□□□□□ -0.34
GGA3-209ENST00000580646 TGFB2P61812 414 aa12.93□□□□□ -0.34
GGA3-209ENST00000580646 CALD1Q05682 793 aaKnown RBP12.93□□□□□ -0.34
GGA3-209ENST00000580646 USPL1Q5W0Q7 1092 aa12.93□□□□□ -0.34
GGA3-209ENST00000580646 NARFQ9UHQ1 456 aa12.93□□□□□ -0.34
GGA3-209ENST00000580646 RRP7AQ9Y3A4 280 aaKnown RBP12.93□□□□□ -0.34
GGA3-209ENST00000580646 TM4SF1P30408 202 aa12.92□□□□□ -0.34
GGA3-209ENST00000580646 EIF5P55010 431 aaKnown RBP12.92□□□□□ -0.34
GGA3-209ENST00000580646 DDR1Q08345 913 aa12.92□□□□□ -0.34
GGA3-209ENST00000580646 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
GGA3-209ENST00000580646 WWC3Q9ULE0 1092 aa12.92□□□□□ -0.34
GGA3-209ENST00000580646 COL15A1P39059 1388 aa12.92□□□□□ -0.34
GGA3-209ENST00000580646 A0A087WZG4 1122 aa12.91□□□□□ -0.34
GGA3-209ENST00000580646 A0A0G2JLW4 131 aa12.91□□□□□ -0.34
GGA3-209ENST00000580646 C10orf71Q711Q0 1435 aa12.9□□□□□ -0.34
GGA3-209ENST00000580646 POLRMTO00411 1230 aaKnown RBP12.9□□□□□ -0.34
GGA3-209ENST00000580646 A1BGP04217 495 aa12.9□□□□□ -0.34
GGA3-209ENST00000580646 IL6STP40189 918 aaPredicted RBP12.9□□□□□ -0.34
GGA3-209ENST00000580646 BCL2L12Q9HB09 334 aa12.9□□□□□ -0.34
GGA3-209ENST00000580646 USP16Q9Y5T5 823 aa12.9□□□□□ -0.34
GGA3-209ENST00000580646 IL16Q14005 1332 aa12.89□□□□□ -0.35
GGA3-209ENST00000580646 SNRPA1P09661 255 aaKnown RBP12.89□□□□□ -0.35
GGA3-209ENST00000580646 DPEP1P16444 411 aa12.89□□□□□ -0.35
GGA3-209ENST00000580646 NFIXQ14938 502 aa12.89□□□□□ -0.35
GGA3-209ENST00000580646 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
GGA3-209ENST00000580646 WWC1Q8IX03 1113 aa12.89□□□□□ -0.35
GGA3-209ENST00000580646 CFAP44Q96MT7 982 aa12.89□□□□□ -0.35
GGA3-209ENST00000580646 THUMPD2Q9BTF0 503 aaKnown RBP12.89□□□□□ -0.35
GGA3-209ENST00000580646 MIS18AQ9NYP9 233 aa12.89□□□□□ -0.35
GGA3-209ENST00000580646 PXDNLA1KZ92 1463 aa12.89□□□□□ -0.35
GGA3-209ENST00000580646 C4AP0C0L4 1744 aa12.88□□□□□ -0.35
GGA3-209ENST00000580646 PRAMEF22A3QJZ6 481 aa12.88□□□□□ -0.35
GGA3-209ENST00000580646 CHL1O00533 1208 aa12.88□□□□□ -0.35
GGA3-209ENST00000580646 ZNF853P0CG23 659 aa12.88□□□□□ -0.35
GGA3-209ENST00000580646 GNAI1P63096 354 aa12.88□□□□□ -0.35
GGA3-209ENST00000580646 NPM2Q86SE8 214 aaKnown RBP12.88□□□□□ -0.35
GGA3-209ENST00000580646 IFT57Q9NWB7 429 aa12.88□□□□□ -0.35
GGA3-209ENST00000580646 TBC1D2BQ9UPU7 963 aa12.88□□□□□ -0.35
GGA3-209ENST00000580646 ZNF330Q9Y3S2 320 aaPredicted RBP12.88□□□□□ -0.35
GGA3-209ENST00000580646 ZNF521Q96K83 1311 aa12.88□□□□□ -0.35
GGA3-209ENST00000580646 CACNA1FO60840 1977 aa12.87□□□□□ -0.35
GGA3-209ENST00000580646 SERPINB2P05120 415 aa12.87□□□□□ -0.35
GGA3-209ENST00000580646 KCNA3P22001 575 aa12.87□□□□□ -0.35
GGA3-209ENST00000580646 TSPYL4Q9UJ04 414 aa12.87□□□□□ -0.35
GGA3-209ENST00000580646 BCS1LQ9Y276 419 aa12.87□□□□□ -0.35
GGA3-209ENST00000580646 EIF4A1P60842 406 aaKnown RBP12.86□□□□□ -0.35
GGA3-209ENST00000580646 BICDL1Q6ZP65 573 aa12.86□□□□□ -0.35
GGA3-209ENST00000580646 PIP4K2AP48426 406 aaPredicted RBP12.85□□□□□ -0.35
GGA3-209ENST00000580646 PIM2Q9P1W9 311 aa12.85□□□□□ -0.35
GGA3-209ENST00000580646 CAMTA2O94983 1202 aa12.84□□□□□ -0.35
GGA3-209ENST00000580646 HOXB7P09629 217 aa12.84□□□□□ -0.35
GGA3-209ENST00000580646 CHRNA5P30532 468 aa12.84□□□□□ -0.35
GGA3-209ENST00000580646 TBC1D9BQ66K14 1250 aa12.84□□□□□ -0.35
GGA3-209ENST00000580646 DZIP3Q86Y13 1208 aaKnown RBP12.84□□□□□ -0.35
GGA3-209ENST00000580646 KIF13BQ9NQT8 1826 aa12.83□□□□□ -0.35
GGA3-209ENST00000580646 NBPF26B4DH59 902 aa12.83□□□□□ -0.36
GGA3-209ENST00000580646 DALRD3Q5D0E6 543 aaKnown RBP12.83□□□□□ -0.36
GGA3-209ENST00000580646 NBPF10Q6P3W6 841 aaKnown RBP12.83□□□□□ -0.36
GGA3-209ENST00000580646 ARHGAP27Q6ZUM4 889 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms