RNA–Protein interactions for RNA: ENST00000580263.5

ACADVL-223, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 2

Gene ACADVL, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-223	ENST00000580263	KDM3B	Q7LBC6	1761 aa		28.86	■■■□□ 2.21
ACADVL-223	ENST00000580263	PELP1	Q8IZL8	1130 aa	Known RBP	28.85	■■■□□ 2.21
ACADVL-223	ENST00000580263	COL15A1	P39059	1388 aa		28.85	■■■□□ 2.21
ACADVL-223	ENST00000580263	STARD3NL	O95772	234 aa		28.84	■■■□□ 2.21
ACADVL-223	ENST00000580263	CANX	P27824	592 aa	Known RBP	28.84	■■■□□ 2.21
ACADVL-223	ENST00000580263	GPR162	Q16538	588 aa		28.84	■■■□□ 2.21
ACADVL-223	ENST00000580263	KIAA1551	Q9HCM1	1747 aa		28.83	■■■□□ 2.21
ACADVL-223	ENST00000580263	FKBP8	Q14318	412 aa		28.83	■■■□□ 2.21
ACADVL-223	ENST00000580263	THUMPD2	Q9BTF0	503 aa	Known RBP	28.83	■■■□□ 2.21
ACADVL-223	ENST00000580263	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.82	■■■□□ 2.2
ACADVL-223	ENST00000580263	TAF7	Q15545	349 aa	Predicted RBP	28.81	■■■□□ 2.2
ACADVL-223	ENST00000580263	USPL1	Q5W0Q7	1092 aa		28.81	■■■□□ 2.2
ACADVL-223	ENST00000580263	TEX13A	Q9BXU3	409 aa	Predicted RBP	28.81	■■■□□ 2.2
ACADVL-223	ENST00000580263	MIS18A	Q9NYP9	233 aa		28.81	■■■□□ 2.2
ACADVL-223	ENST00000580263	UTRN	P46939	3433 aa		28.81	■■■□□ 2.2
ACADVL-223	ENST00000580263	PRAMEF22	A3QJZ6	481 aa		28.8	■■■□□ 2.2
ACADVL-223	ENST00000580263	ZNF316	A6NFI3	1004 aa	Predicted RBP	28.8	■■■□□ 2.2
ACADVL-223	ENST00000580263	YY1	P25490	414 aa		28.8	■■■□□ 2.2
ACADVL-223	ENST00000580263	ZPR1	O75312	459 aa		28.79	■■■□□ 2.2
ACADVL-223	ENST00000580263	CCDC146	Q8IYE0	955 aa		28.79	■■■□□ 2.2
ACADVL-223	ENST00000580263	AFDN	P55196	1824 aa	Known RBP	28.78	■■■□□ 2.2
ACADVL-223	ENST00000580263	LAMB4	A4D0S4	1761 aa		28.78	■■■□□ 2.2
ACADVL-223	ENST00000580263	YBX3	P16989	372 aa	Known RBP eCLIP	28.78	■■■□□ 2.2
ACADVL-223	ENST00000580263	EIF5	P55010	431 aa	Known RBP	28.78	■■■□□ 2.2
ACADVL-223	ENST00000580263	WDR43	Q15061	677 aa	Known RBP eCLIP	28.78	■■■□□ 2.2
ACADVL-223	ENST00000580263	NARF	Q9UHQ1	456 aa		28.78	■■■□□ 2.2
ACADVL-223	ENST00000580263	C10orf71	Q711Q0	1435 aa		28.77	■■■□□ 2.2
ACADVL-223	ENST00000580263	SCN7A	Q01118	1682 aa		28.77	■■■□□ 2.2
ACADVL-223	ENST00000580263	A1BG	P04217	495 aa		28.77	■■■□□ 2.2
ACADVL-223	ENST00000580263	DDR1	Q08345	913 aa		28.77	■■■□□ 2.2
ACADVL-223	ENST00000580263	USP16	Q9Y5T5	823 aa		28.77	■■■□□ 2.2
ACADVL-223	ENST00000580263	PARP3	Q9Y6F1	533 aa		28.77	■■■□□ 2.2
ACADVL-223	ENST00000580263	GOLGB1	Q14789	3259 aa	Known RBP	28.76	■■■□□ 2.19
ACADVL-223	ENST00000580263	TMPO	P42166	694 aa	Known RBP	28.75	■■■□□ 2.19
ACADVL-223	ENST00000580263	RIPK4	P57078	832 aa		28.75	■■■□□ 2.19
ACADVL-223	ENST00000580263	BCL2L12	Q9HB09	334 aa		28.75	■■■□□ 2.19
ACADVL-223	ENST00000580263	WWC3	Q9ULE0	1092 aa		28.75	■■■□□ 2.19
ACADVL-223	ENST00000580263	ZNF330	Q9Y3S2	320 aa	Predicted RBP	28.75	■■■□□ 2.19
ACADVL-223	ENST00000580263	SNRPA1	P09661	255 aa	Known RBP	28.74	■■■□□ 2.19
ACADVL-223	ENST00000580263	ADAMTS8	Q9UP79	889 aa		28.74	■■■□□ 2.19
ACADVL-223	ENST00000580263	RRP7A	Q9Y3A4	280 aa	Known RBP	28.74	■■■□□ 2.19
ACADVL-223	ENST00000580263	PXDNL	A1KZ92	1463 aa		28.73	■■■□□ 2.19
ACADVL-223	ENST00000580263	BRCA1	P38398	1863 aa	Known RBP	28.73	■■■□□ 2.19
ACADVL-223	ENST00000580263	PIP4K2A	P48426	406 aa	Predicted RBP	28.73	■■■□□ 2.19
ACADVL-223	ENST00000580263	BCOR	Q6W2J9	1755 aa		28.73	■■■□□ 2.19
ACADVL-223	ENST00000580263	TM4SF1	P30408	202 aa		28.72	■■■□□ 2.19
ACADVL-223	ENST00000580263	IL6ST	P40189	918 aa	Predicted RBP	28.72	■■■□□ 2.19
ACADVL-223	ENST00000580263	PNISR	Q8TF01	805 aa	Known RBP	28.71	■■■□□ 2.19
ACADVL-223	ENST00000580263	RUNDC1	Q96C34	613 aa		28.71	■■■□□ 2.19
ACADVL-223	ENST00000580263	NRXN2	Q9P2S2	1712 aa		28.71	■■■□□ 2.19
ACADVL-223	ENST00000580263		A0A087WZG4	1122 aa		28.7	■■■□□ 2.18
ACADVL-223	ENST00000580263	POLRMT	O00411	1230 aa	Known RBP	28.7	■■■□□ 2.18
ACADVL-223	ENST00000580263	NFIX	Q14938	502 aa		28.7	■■■□□ 2.18
ACADVL-223	ENST00000580263	NEUROD2	Q15784	382 aa		28.69	■■■□□ 2.18
ACADVL-223	ENST00000580263	TBC1D2B	Q9UPU7	963 aa		28.69	■■■□□ 2.18
ACADVL-223	ENST00000580263	EIF4A1	P60842	406 aa	Known RBP	28.67	■■■□□ 2.18
ACADVL-223	ENST00000580263		A0A0G2JLW4	131 aa		28.66	■■■□□ 2.18
ACADVL-223	ENST00000580263	GRIN3B	O60391	1043 aa		28.66	■■■□□ 2.18
ACADVL-223	ENST00000580263	TGFB2	P61812	414 aa		28.66	■■■□□ 2.18
ACADVL-223	ENST00000580263	LMOD3	Q0VAK6	560 aa		28.66	■■■□□ 2.18
ACADVL-223	ENST00000580263	CCDC184	Q52MB2	194 aa		28.66	■■■□□ 2.18
ACADVL-223	ENST00000580263	NBPF26	B4DH59	902 aa		28.65	■■■□□ 2.18
ACADVL-223	ENST00000580263	NBPF10	Q6P3W6	841 aa	Known RBP	28.65	■■■□□ 2.18
ACADVL-223	ENST00000580263	NBPF15	Q8N660	670 aa		28.65	■■■□□ 2.18
ACADVL-223	ENST00000580263	GIGYF1	O75420	1035 aa	Predicted RBP	28.64	■■■□□ 2.18
ACADVL-223	ENST00000580263	DPEP1	P16444	411 aa		28.64	■■■□□ 2.18
ACADVL-223	ENST00000580263	BICDL1	Q6ZP65	573 aa		28.63	■■■□□ 2.17
ACADVL-223	ENST00000580263	NPM2	Q86SE8	214 aa	Known RBP	28.63	■■■□□ 2.17
ACADVL-223	ENST00000580263	TSPYL4	Q9UJ04	414 aa		28.63	■■■□□ 2.17
ACADVL-223	ENST00000580263	TRIM35	Q9UPQ4	493 aa		28.63	■■■□□ 2.17
ACADVL-223	ENST00000580263	CAMTA2	O94983	1202 aa		28.62	■■■□□ 2.17
ACADVL-223	ENST00000580263	TBC1D9B	Q66K14	1250 aa		28.62	■■■□□ 2.17
ACADVL-223	ENST00000580263	DZIP3	Q86Y13	1208 aa	Known RBP	28.62	■■■□□ 2.17
ACADVL-223	ENST00000580263	SERPINB2	P05120	415 aa		28.61	■■■□□ 2.17
ACADVL-223	ENST00000580263	ARFGEF1	Q9Y6D6	1849 aa		28.6	■■■□□ 2.17
ACADVL-223	ENST00000580263	ANKRD31	Q8N7Z5	1873 aa		28.6	■■■□□ 2.17
ACADVL-223	ENST00000580263	DLEC1	Q9Y238	1755 aa		28.58	■■■□□ 2.17
ACADVL-223	ENST00000580263	KCNA3	P22001	575 aa		28.58	■■■□□ 2.17
ACADVL-223	ENST00000580263	CHRNA5	P30532	468 aa		28.57	■■■□□ 2.16
ACADVL-223	ENST00000580263	CARMIL3	Q8ND23	1372 aa		28.57	■■■□□ 2.16
ACADVL-223	ENST00000580263	BABAM1	Q9NWV8	329 aa		28.56	■■■□□ 2.16
ACADVL-223	ENST00000580263	BCS1L	Q9Y276	419 aa		28.56	■■■□□ 2.16
ACADVL-223	ENST00000580263	NUP98	P52948	1817 aa		28.55	■■■□□ 2.16
ACADVL-223	ENST00000580263	APAF1	O14727	1248 aa		28.55	■■■□□ 2.16
ACADVL-223	ENST00000580263	ANP32C	O43423	234 aa		28.55	■■■□□ 2.16
ACADVL-223	ENST00000580263	ZNF784	Q8NCA9	323 aa	Predicted RBP	28.54	■■■□□ 2.16
ACADVL-223	ENST00000580263	LAS1L	Q9Y4W2	734 aa	Known RBP	28.53	■■■□□ 2.16
ACADVL-223	ENST00000580263	NGEF	Q8N5V2	710 aa		28.52	■■■□□ 2.16
ACADVL-223	ENST00000580263	COL11A2	P13942	1736 aa	Predicted RBP	28.52	■■■□□ 2.16
ACADVL-223	ENST00000580263	CHL1	O00533	1208 aa		28.51	■■■□□ 2.15
ACADVL-223	ENST00000580263	SETDB2	Q96T68	719 aa		28.51	■■■□□ 2.15
ACADVL-223	ENST00000580263	PIM2	Q9P1W9	311 aa		28.51	■■■□□ 2.15
ACADVL-223	ENST00000580263	MYL6B	P14649	208 aa		28.5	■■■□□ 2.15
ACADVL-223	ENST00000580263	CCDC24	Q8N4L8	307 aa		28.5	■■■□□ 2.15
ACADVL-223	ENST00000580263	KRT24	Q2M2I5	525 aa		28.49	■■■□□ 2.15
ACADVL-223	ENST00000580263	PRR5L	Q6MZQ0	368 aa		28.49	■■■□□ 2.15
ACADVL-223	ENST00000580263	CLEC4G	Q6UXB4	293 aa		28.49	■■■□□ 2.15
ACADVL-223	ENST00000580263	EIF2S2	P20042	333 aa	Known RBP	28.48	■■■□□ 2.15
ACADVL-223	ENST00000580263	HLF	Q16534	295 aa		28.48	■■■□□ 2.15
ACADVL-223	ENST00000580263	MRS2	Q9HD23	443 aa		28.48	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms