RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 HTATSF1O43719 755 aaKnown RBP19.38■□□□□ 0.69
CCDC57-212ENST00000578910 TGFB2P61812 414 aa19.38■□□□□ 0.69
CCDC57-212ENST00000578910 FMNL2Q96PY5 1086 aa19.38■□□□□ 0.69
CCDC57-212ENST00000578910 NARFQ9UHQ1 456 aa19.38■□□□□ 0.69
CCDC57-212ENST00000578910 HEG1Q9ULI3 1381 aa19.38■□□□□ 0.69
CCDC57-212ENST00000578910 CICQ96RK0 1608 aaPredicted RBP19.37■□□□□ 0.69
CCDC57-212ENST00000578910 DDR1Q08345 913 aa19.37■□□□□ 0.69
CCDC57-212ENST00000578910 RALBP1Q15311 655 aa19.37■□□□□ 0.69
CCDC57-212ENST00000578910 EIF5P55010 431 aaKnown RBP19.36■□□□□ 0.69
CCDC57-212ENST00000578910 PLEKHF1Q96S99 279 aa19.36■□□□□ 0.69
CCDC57-212ENST00000578910 C4AP0C0L4 1744 aa19.35■□□□□ 0.69
CCDC57-212ENST00000578910 A1BGP04217 495 aa19.35■□□□□ 0.69
CCDC57-212ENST00000578910 DPEP1P16444 411 aa19.35■□□□□ 0.69
CCDC57-212ENST00000578910 BCL2L12Q9HB09 334 aa19.35■□□□□ 0.69
CCDC57-212ENST00000578910 USP16Q9Y5T5 823 aa19.35■□□□□ 0.69
CCDC57-212ENST00000578910 POLRMTO00411 1230 aaKnown RBP19.34■□□□□ 0.69
CCDC57-212ENST00000578910 NEFMP07197 916 aa19.34■□□□□ 0.69
CCDC57-212ENST00000578910 UBR2Q8IWV8 1755 aa19.34■□□□□ 0.69
CCDC57-212ENST00000578910 COL15A1P39059 1388 aa19.33■□□□□ 0.69
CCDC57-212ENST00000578910 KCNA3P22001 575 aa19.33■□□□□ 0.68
CCDC57-212ENST00000578910 TAF7Q15545 349 aaPredicted RBP19.33■□□□□ 0.68
CCDC57-212ENST00000578910 MIS18AQ9NYP9 233 aa19.33■□□□□ 0.68
CCDC57-212ENST00000578910 SIPA1L3O60292 1781 aaPredicted RBP19.33■□□□□ 0.68
CCDC57-212ENST00000578910 PRAMEF22A3QJZ6 481 aa19.32■□□□□ 0.68
CCDC57-212ENST00000578910 NFIXQ14938 502 aa19.32■□□□□ 0.68
CCDC57-212ENST00000578910 PXDNLA1KZ92 1463 aa19.32■□□□□ 0.68
CCDC57-212ENST00000578910 A0A087WZG4 1122 aa19.31■□□□□ 0.68
CCDC57-212ENST00000578910 PNNQ9H307 717 aaKnown RBP19.31■□□□□ 0.68
CCDC57-212ENST00000578910 TBC1D2BQ9UPU7 963 aa19.31■□□□□ 0.68
CCDC57-212ENST00000578910 BCS1LQ9Y276 419 aa19.31■□□□□ 0.68
CCDC57-212ENST00000578910 C10orf71Q711Q0 1435 aa19.31■□□□□ 0.68
CCDC57-212ENST00000578910 IL6STP40189 918 aaPredicted RBP19.3■□□□□ 0.68
CCDC57-212ENST00000578910 ZNF330Q9Y3S2 320 aaPredicted RBP19.3■□□□□ 0.68
CCDC57-212ENST00000578910 KIF13BQ9NQT8 1826 aa19.3■□□□□ 0.68
CCDC57-212ENST00000578910 SERPINB2P05120 415 aa19.29■□□□□ 0.68
CCDC57-212ENST00000578910 SNRPA1P09661 255 aaKnown RBP19.29■□□□□ 0.68
CCDC57-212ENST00000578910 PIP4K2AP48426 406 aaPredicted RBP19.29■□□□□ 0.68
CCDC57-212ENST00000578910 NFE2L2Q16236 605 aa19.29■□□□□ 0.68
CCDC57-212ENST00000578910 BICDL1Q6ZP65 573 aa19.29■□□□□ 0.68
CCDC57-212ENST00000578910 N4BP2Q86UW6 1770 aaPredicted RBP19.29■□□□□ 0.68
CCDC57-212ENST00000578910 PIM2Q9P1W9 311 aa19.28■□□□□ 0.68
CCDC57-212ENST00000578910 CHRNA5P30532 468 aa19.27■□□□□ 0.68
CCDC57-212ENST00000578910 THUMPD2Q9BTF0 503 aaKnown RBP19.27■□□□□ 0.68
CCDC57-212ENST00000578910 KIAA1551Q9HCM1 1747 aa19.26■□□□□ 0.67
CCDC57-212ENST00000578910 TBC1D9BQ66K14 1250 aa19.26■□□□□ 0.67
CCDC57-212ENST00000578910 ARHGAP27Q6ZUM4 889 aa19.26■□□□□ 0.67
CCDC57-212ENST00000578910 NPM2Q86SE8 214 aaKnown RBP19.26■□□□□ 0.67
CCDC57-212ENST00000578910 MYBBP1AQ9BQG0 1328 aaKnown RBP19.25■□□□□ 0.67
CCDC57-212ENST00000578910 MAPK8IP3Q9UPT6 1336 aa19.25■□□□□ 0.67
CCDC57-212ENST00000578910 PNISRQ8TF01 805 aaKnown RBP19.25■□□□□ 0.67
CCDC57-212ENST00000578910 RIPK4P57078 832 aa19.24■□□□□ 0.67
CCDC57-212ENST00000578910 DZIP3Q86Y13 1208 aaKnown RBP19.24■□□□□ 0.67
CCDC57-212ENST00000578910 NBPF26B4DH59 902 aa19.23■□□□□ 0.67
CCDC57-212ENST00000578910 CAMTA2O94983 1202 aa19.23■□□□□ 0.67
CCDC57-212ENST00000578910 DALRD3Q5D0E6 543 aaKnown RBP19.23■□□□□ 0.67
CCDC57-212ENST00000578910 NBPF10Q6P3W6 841 aaKnown RBP19.23■□□□□ 0.67
CCDC57-212ENST00000578910 NBPF15Q8N660 670 aa19.23■□□□□ 0.67
CCDC57-212ENST00000578910 DLG5Q8TDM6 1919 aa19.23■□□□□ 0.67
CCDC57-212ENST00000578910 EIF4A1P60842 406 aaKnown RBP19.22■□□□□ 0.67
CCDC57-212ENST00000578910 TMPOP42166 694 aaKnown RBP19.21■□□□□ 0.67
CCDC57-212ENST00000578910 PRKRIP1Q9H875 184 aaPredicted RBP19.21■□□□□ 0.67
CCDC57-212ENST00000578910 AFDNP55196 1824 aaKnown RBP19.21■□□□□ 0.67
CCDC57-212ENST00000578910 ATP10DQ9P241 1426 aa19.2■□□□□ 0.66
CCDC57-212ENST00000578910 GIGYF1O75420 1035 aaPredicted RBP19.2■□□□□ 0.66
CCDC57-212ENST00000578910 CCDC146Q8IYE0 955 aa19.2■□□□□ 0.66
CCDC57-212ENST00000578910 CCDC24Q8N4L8 307 aa19.2■□□□□ 0.66
CCDC57-212ENST00000578910 ADAMTS8Q9UP79 889 aa19.2■□□□□ 0.66
CCDC57-212ENST00000578910 C1QTNF8P60827 252 aa19.19■□□□□ 0.66
CCDC57-212ENST00000578910 NEUROD2Q15784 382 aa19.19■□□□□ 0.66
CCDC57-212ENST00000578910 ZNF526Q8TF50 670 aaPredicted RBP19.19■□□□□ 0.66
CCDC57-212ENST00000578910 SETDB2Q96T68 719 aa19.19■□□□□ 0.66
CCDC57-212ENST00000578910 PRR5LQ6MZQ0 368 aa19.18■□□□□ 0.66
CCDC57-212ENST00000578910 C2CD5Q86YS7 1000 aa19.18■□□□□ 0.66
CCDC57-212ENST00000578910 RRP7AQ9Y3A4 280 aaKnown RBP19.18■□□□□ 0.66
CCDC57-212ENST00000578910 H0YIN7 160 aa19.17■□□□□ 0.66
CCDC57-212ENST00000578910 ZEB1P37275 1124 aaPredicted RBP19.17■□□□□ 0.66
CCDC57-212ENST00000578910 WDR43Q15061 677 aaKnown RBP eCLIP19.17■□□□□ 0.66
CCDC57-212ENST00000578910 CLEC4GQ6UXB4 293 aa19.17■□□□□ 0.66
CCDC57-212ENST00000578910 GPBP1L1Q9HC44 474 aaPredicted RBP19.17■□□□□ 0.66
CCDC57-212ENST00000578910 ADCY9O60503 1353 aa19.17■□□□□ 0.66
CCDC57-212ENST00000578910 NRXN2Q9P2S2 1712 aa19.17■□□□□ 0.66
CCDC57-212ENST00000578910 BRCA1P38398 1863 aaKnown RBP19.16■□□□□ 0.66
CCDC57-212ENST00000578910 NGEFQ8N5V2 710 aa19.16■□□□□ 0.66
CCDC57-212ENST00000578910 RUNDC1Q96C34 613 aa19.16■□□□□ 0.66
CCDC57-212ENST00000578910 BRIP1Q9BX63 1249 aa19.16■□□□□ 0.66
CCDC57-212ENST00000578910 CARMIL3Q8ND23 1372 aa19.16■□□□□ 0.66
CCDC57-212ENST00000578910 TTLL6Q8N841 843 aa19.15■□□□□ 0.66
CCDC57-212ENST00000578910 TSPYL4Q9UJ04 414 aa19.15■□□□□ 0.66
CCDC57-212ENST00000578910 PDE6BP35913 854 aa19.14■□□□□ 0.65
CCDC57-212ENST00000578910 HLFQ16534 295 aa19.14■□□□□ 0.65
CCDC57-212ENST00000578910 LMOD3Q0VAK6 560 aa19.13■□□□□ 0.65
CCDC57-212ENST00000578910 C9orf131Q5VYM1 1079 aa19.13■□□□□ 0.65
CCDC57-212ENST00000578910 ZNF622Q969S3 477 aaKnown RBP eCLIP19.13■□□□□ 0.653e-8■□□□□ 10
CCDC57-212ENST00000578910 TRIM35Q9UPQ4 493 aa19.13■□□□□ 0.65
CCDC57-212ENST00000578910 ZNF652Q9Y2D9 606 aa19.13■□□□□ 0.65
CCDC57-212ENST00000578910 NPHP1O15259 732 aa19.12■□□□□ 0.65
CCDC57-212ENST00000578910 MYL6BP14649 208 aa19.12■□□□□ 0.65
CCDC57-212ENST00000578910 CNBD1Q8NA66 436 aa19.12■□□□□ 0.65
CCDC57-212ENST00000578910 BABAM1Q9NWV8 329 aa19.12■□□□□ 0.65
CCDC57-212ENST00000578910 PDZRN3Q9UPQ7 1066 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 226.9 ms