RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 PI4KAP1Q8N8J0 262 aa11.45□□□□□ -0.58
CDK5RAP3-208ENST00000578525 ESYT1Q9BSJ8 1104 aa11.45□□□□□ -0.58
CDK5RAP3-208ENST00000578525 AXIN2Q9Y2T1 843 aa11.45□□□□□ -0.58
CDK5RAP3-208ENST00000578525 STRCP1A6NGW2 1772 aa11.45□□□□□ -0.58
CDK5RAP3-208ENST00000578525 SCN11AQ9UI33 1791 aa11.44□□□□□ -0.58
CDK5RAP3-208ENST00000578525 TMEM94Q12767 1356 aa11.44□□□□□ -0.58
CDK5RAP3-208ENST00000578525 CRYBG1Q9Y4K1 1723 aa11.44□□□□□ -0.58
CDK5RAP3-208ENST00000578525 GIGYF1O75420 1035 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-208ENST00000578525 MCCP23508 829 aa11.44□□□□□ -0.58
CDK5RAP3-208ENST00000578525 CHMLP26374 656 aa11.44□□□□□ -0.58
CDK5RAP3-208ENST00000578525 KIF1BPQ96EK5 621 aa11.44□□□□□ -0.58
CDK5RAP3-208ENST00000578525 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
CDK5RAP3-208ENST00000578525 HDAC5Q9UQL6 1122 aa11.44□□□□□ -0.58
CDK5RAP3-208ENST00000578525 TNS3Q68CZ2 1445 aa11.43□□□□□ -0.58
CDK5RAP3-208ENST00000578525 EPB41L2O43491 1005 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-208ENST00000578525 SURF6O75683 361 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-208ENST00000578525 TATP17735 454 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-208ENST00000578525 MTX1Q13505 466 aa11.43□□□□□ -0.58
CDK5RAP3-208ENST00000578525 TSHZ3Q63HK5 1081 aa11.43□□□□□ -0.58
CDK5RAP3-208ENST00000578525 KSR2Q6VAB6 950 aa11.43□□□□□ -0.58
CDK5RAP3-208ENST00000578525 RHPN1Q8TCX5 695 aa11.43□□□□□ -0.58
CDK5RAP3-208ENST00000578525 RAPGEF4Q8WZA2 1011 aa11.43□□□□□ -0.58
CDK5RAP3-208ENST00000578525 HYPKQ9NX55 129 aa11.43□□□□□ -0.58
CDK5RAP3-208ENST00000578525 MRC1P22897 1456 aa11.43□□□□□ -0.58
CDK5RAP3-208ENST00000578525 KDM6AO15550 1401 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-208ENST00000578525 TRIM6-TRIM34B2RNG4 842 aa11.42□□□□□ -0.58
CDK5RAP3-208ENST00000578525 SRGAP3O43295 1099 aa11.42□□□□□ -0.58
CDK5RAP3-208ENST00000578525 ANXA1P04083 346 aa11.42□□□□□ -0.58
CDK5RAP3-208ENST00000578525 NBPF7P0C2Y1 421 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-208ENST00000578525 ZC3H6P61129 1189 aaKnown RBP11.42□□□□□ -0.58
CDK5RAP3-208ENST00000578525 SKOR2Q2VWA4 1001 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-208ENST00000578525 CLEC17AQ6ZS10 378 aa11.42□□□□□ -0.58
CDK5RAP3-208ENST00000578525 RILPL2Q969X0 211 aa11.42□□□□□ -0.58
CDK5RAP3-208ENST00000578525 IL1RAPL2Q9NP60 686 aa11.42□□□□□ -0.58
CDK5RAP3-208ENST00000578525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.42□□□□□ -0.581e-11■□□□□ 11
CDK5RAP3-208ENST00000578525 BRPF3Q9ULD4 1205 aa11.42□□□□□ -0.58
CDK5RAP3-208ENST00000578525 SPG7Q9UQ90 795 aa11.42□□□□□ -0.58
CDK5RAP3-208ENST00000578525 MAP3K2Q9Y2U5 619 aa11.42□□□□□ -0.58
CDK5RAP3-208ENST00000578525 PKD1L3Q7Z443 1732 aa11.42□□□□□ -0.58
CDK5RAP3-208ENST00000578525 C5P01031 1676 aa11.42□□□□□ -0.58
CDK5RAP3-208ENST00000578525 NPHP3Q7Z494 1330 aa11.41□□□□□ -0.58
CDK5RAP3-208ENST00000578525 USP42Q9H9J4 1324 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-208ENST00000578525 MEGF6O75095 1541 aa11.41□□□□□ -0.58
CDK5RAP3-208ENST00000578525 DDX58O95786 925 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-208ENST00000578525 SSFA2P28290 1259 aa11.41□□□□□ -0.58
CDK5RAP3-208ENST00000578525 ANAPC15P60006 121 aa11.41□□□□□ -0.58
CDK5RAP3-208ENST00000578525 NUCB2P80303 420 aa11.41□□□□□ -0.58
CDK5RAP3-208ENST00000578525 PROSER3Q2NL68 480 aa11.41□□□□□ -0.58
CDK5RAP3-208ENST00000578525 NUTM1Q86Y26 1132 aa11.41□□□□□ -0.58
CDK5RAP3-208ENST00000578525 IL27Q8NEV9 243 aa11.41□□□□□ -0.58
CDK5RAP3-208ENST00000578525 IL17RAQ96F46 866 aa11.41□□□□□ -0.58
CDK5RAP3-208ENST00000578525 CWC22Q9HCG8 908 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-208ENST00000578525 DDX21Q9NR30 783 aaKnown RBP eCLIP11.41□□□□□ -0.58
CDK5RAP3-208ENST00000578525 NLRP2Q9NX02 1062 aa11.41□□□□□ -0.58
CDK5RAP3-208ENST00000578525 FSD2A1L4K1 749 aa11.4□□□□□ -0.58
CDK5RAP3-208ENST00000578525 GOLGA6L3A6NEY3 463 aa11.4□□□□□ -0.58
CDK5RAP3-208ENST00000578525 PHKG2P15735 406 aa11.4□□□□□ -0.58
CDK5RAP3-208ENST00000578525 MCM2P49736 904 aa11.4□□□□□ -0.58
CDK5RAP3-208ENST00000578525 LINS1Q8NG48 757 aa11.4□□□□□ -0.58
CDK5RAP3-208ENST00000578525 SLC52A2Q9HAB3 445 aa11.4□□□□□ -0.58
CDK5RAP3-208ENST00000578525 UTYO14607 1347 aa11.39□□□□□ -0.59
CDK5RAP3-208ENST00000578525 AK9Q5TCS8 1911 aa11.39□□□□□ -0.59
CDK5RAP3-208ENST00000578525 PRAMEF22A3QJZ6 481 aa11.39□□□□□ -0.59
CDK5RAP3-208ENST00000578525 GOLGA6L22H0YM25 854 aa11.39□□□□□ -0.59
CDK5RAP3-208ENST00000578525 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
CDK5RAP3-208ENST00000578525 ERC1Q8IUD2 1116 aa11.39□□□□□ -0.59
CDK5RAP3-208ENST00000578525 UNC5CLQ8IV45 518 aa11.39□□□□□ -0.59
CDK5RAP3-208ENST00000578525 PI4K2BQ8TCG2 481 aa11.39□□□□□ -0.59
CDK5RAP3-208ENST00000578525 C9orf78Q9NZ63 289 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-208ENST00000578525 PARP4Q9UKK3 1724 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-208ENST00000578525 ISY1Q9ULR0 285 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-208ENST00000578525 CPDO75976 1380 aa11.39□□□□□ -0.59
CDK5RAP3-208ENST00000578525 SPATA31A3Q5VYP0 1347 aa11.38□□□□□ -0.59
CDK5RAP3-208ENST00000578525 TTC41PQ6P2S7 1318 aa11.38□□□□□ -0.59
CDK5RAP3-208ENST00000578525 CYP2E1P05181 493 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-208ENST00000578525 CSB-PGBD3P0DP91 1061 aa11.38□□□□□ -0.59
CDK5RAP3-208ENST00000578525 OS9Q13438 667 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-208ENST00000578525 PDIA6Q15084 440 aa11.38□□□□□ -0.59
CDK5RAP3-208ENST00000578525 ZNF790Q6PG37 636 aa11.38□□□□□ -0.59
CDK5RAP3-208ENST00000578525 IFNL2Q8IZJ0 200 aa11.38□□□□□ -0.59
CDK5RAP3-208ENST00000578525 CNTROBQ8N137 903 aa11.38□□□□□ -0.59
CDK5RAP3-208ENST00000578525 ANO2Q9NQ90 1003 aa11.38□□□□□ -0.59
CDK5RAP3-208ENST00000578525 LAMB4A4D0S4 1761 aa11.37□□□□□ -0.59
CDK5RAP3-208ENST00000578525 GRM8O00222 908 aa11.37□□□□□ -0.59
CDK5RAP3-208ENST00000578525 BAG4O95429 457 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-208ENST00000578525 LARP1Q6PKG0 1096 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-208ENST00000578525 DDX17Q92841 729 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-208ENST00000578525 SUCLG2Q96I99 432 aa11.37□□□□□ -0.59
CDK5RAP3-208ENST00000578525 GZF1Q9H116 711 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-208ENST00000578525 GLRX3O76003 335 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-208ENST00000578525 NEK4P51957 841 aa11.36□□□□□ -0.59
CDK5RAP3-208ENST00000578525 CUL4AQ13619 759 aa11.36□□□□□ -0.59
CDK5RAP3-208ENST00000578525 CWF19L2Q2TBE0 894 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-208ENST00000578525 CLASRPQ8N2M8 674 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-208ENST00000578525 GPATCH3Q96I76 525 aa11.36□□□□□ -0.59
CDK5RAP3-208ENST00000578525 DCAF5Q96JK2 942 aa11.36□□□□□ -0.59
CDK5RAP3-208ENST00000578525 PALD1Q9ULE6 856 aa11.36□□□□□ -0.59
CDK5RAP3-208ENST00000578525 XIRP1Q702N8 1843 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-208ENST00000578525 SGSM2O43147 1006 aa11.35□□□□□ -0.59
CDK5RAP3-208ENST00000578525 HSPA4P34932 840 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms