RNA–Protein interactions for RNA: ENST00000578502.1

ERBB2-207, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-207ENST00000578502 SOS1Q07889 1333 aaPredicted RBP13.94□□□□□ -0.18
ERBB2-207ENST00000578502 MMP10P09238 476 aa13.94□□□□□ -0.18
ERBB2-207ENST00000578502 PIP4K2AP48426 406 aaPredicted RBP13.94□□□□□ -0.18
ERBB2-207ENST00000578502 RIPK4P57078 832 aa13.94□□□□□ -0.18
ERBB2-207ENST00000578502 WDR43Q15061 677 aaKnown RBP eCLIP13.94□□□□□ -0.18
ERBB2-207ENST00000578502 TAF7Q15545 349 aaPredicted RBP13.94□□□□□ -0.18
ERBB2-207ENST00000578502 NEUROD2Q15784 382 aa13.94□□□□□ -0.18
ERBB2-207ENST00000578502 FMNL2Q96PY5 1086 aa13.94□□□□□ -0.18
ERBB2-207ENST00000578502 USP16Q9Y5T5 823 aa13.94□□□□□ -0.18
ERBB2-207ENST00000578502 SENP3-EIF4A1A0A087X0R7 540 aa13.93□□□□□ -0.18
ERBB2-207ENST00000578502 A1BGP04217 495 aa13.93□□□□□ -0.18
ERBB2-207ENST00000578502 ADRA2BP18089 450 aa13.93□□□□□ -0.18
ERBB2-207ENST00000578502 TMPOP42166 694 aaKnown RBP13.93□□□□□ -0.18
ERBB2-207ENST00000578502 FKBP8Q14318 412 aa13.93□□□□□ -0.18
ERBB2-207ENST00000578502 PNNQ9H307 717 aaKnown RBP13.93□□□□□ -0.18
ERBB2-207ENST00000578502 USP42Q9H9J4 1324 aaKnown RBP13.92□□□□□ -0.18
ERBB2-207ENST00000578502 USPL1Q5W0Q7 1092 aa13.92□□□□□ -0.18
ERBB2-207ENST00000578502 RUNDC1Q96C34 613 aa13.92□□□□□ -0.18
ERBB2-207ENST00000578502 KDM3BQ7LBC6 1761 aa13.91□□□□□ -0.18
ERBB2-207ENST00000578502 STARD3NLO95772 234 aa13.91□□□□□ -0.18
ERBB2-207ENST00000578502 BCL2L12Q9HB09 334 aa13.91□□□□□ -0.18
ERBB2-207ENST00000578502 WWC3Q9ULE0 1092 aa13.91□□□□□ -0.18
ERBB2-207ENST00000578502 ZNF330Q9Y3S2 320 aaPredicted RBP13.91□□□□□ -0.18
ERBB2-207ENST00000578502 COL15A1P39059 1388 aa13.91□□□□□ -0.18
ERBB2-207ENST00000578502 DDR1Q08345 913 aa13.9□□□□□ -0.18
ERBB2-207ENST00000578502 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
ERBB2-207ENST00000578502 NLGN1Q8N2Q7 840 aa13.9□□□□□ -0.18
ERBB2-207ENST00000578502 TRIM35Q9UPQ4 493 aa13.9□□□□□ -0.18
ERBB2-207ENST00000578502 EIF5P55010 431 aaKnown RBP13.89□□□□□ -0.19
ERBB2-207ENST00000578502 NBPF26B4DH59 902 aa13.88□□□□□ -0.19
ERBB2-207ENST00000578502 ZPR1O75312 459 aa13.88□□□□□ -0.19
ERBB2-207ENST00000578502 SNRPA1P09661 255 aaKnown RBP13.88□□□□□ -0.19
ERBB2-207ENST00000578502 EIF4A1P60842 406 aaKnown RBP13.88□□□□□ -0.19
ERBB2-207ENST00000578502 NBPF10Q6P3W6 841 aaKnown RBP13.88□□□□□ -0.19
ERBB2-207ENST00000578502 NBPF15Q8N660 670 aa13.88□□□□□ -0.19
ERBB2-207ENST00000578502 TEX13AQ9BXU3 409 aaPredicted RBP13.88□□□□□ -0.19
ERBB2-207ENST00000578502 NARFQ9UHQ1 456 aa13.88□□□□□ -0.19
ERBB2-207ENST00000578502 TBC1D2BQ9UPU7 963 aa13.88□□□□□ -0.19
ERBB2-207ENST00000578502 CD2APQ9Y5K6 639 aa13.88□□□□□ -0.19
ERBB2-207ENST00000578502 APAF1O14727 1248 aa13.87□□□□□ -0.19
ERBB2-207ENST00000578502 ANP32CO43423 234 aa13.87□□□□□ -0.19
ERBB2-207ENST00000578502 YBX3P16989 372 aaKnown RBP eCLIP13.87□□□□□ -0.19
ERBB2-207ENST00000578502 TM4SF1P30408 202 aa13.87□□□□□ -0.19
ERBB2-207ENST00000578502 NFIXQ14938 502 aa13.86□□□□□ -0.19
ERBB2-207ENST00000578502 GPR162Q16538 588 aa13.86□□□□□ -0.19
ERBB2-207ENST00000578502 PNISRQ8TF01 805 aaKnown RBP13.86□□□□□ -0.19
ERBB2-207ENST00000578502 TSPYL4Q9UJ04 414 aa13.86□□□□□ -0.19
ERBB2-207ENST00000578502 PARP3Q9Y6F1 533 aa13.86□□□□□ -0.19
ERBB2-207ENST00000578502 KIAA1551Q9HCM1 1747 aa13.86□□□□□ -0.19
ERBB2-207ENST00000578502 N4BP2Q86UW6 1770 aaPredicted RBP13.86□□□□□ -0.19
ERBB2-207ENST00000578502 DCAF8L1A6NGE4 600 aa13.85□□□□□ -0.19
ERBB2-207ENST00000578502 POLRMTO00411 1230 aaKnown RBP13.85□□□□□ -0.19
ERBB2-207ENST00000578502 GIGYF1O75420 1035 aaPredicted RBP13.85□□□□□ -0.19
ERBB2-207ENST00000578502 IL6STP40189 918 aaPredicted RBP13.85□□□□□ -0.19
ERBB2-207ENST00000578502 KRT24Q2M2I5 525 aa13.85□□□□□ -0.19
ERBB2-207ENST00000578502 BICDL1Q6ZP65 573 aa13.85□□□□□ -0.19
ERBB2-207ENST00000578502 MRS2Q9HD23 443 aa13.85□□□□□ -0.19
ERBB2-207ENST00000578502 LAS1LQ9Y4W2 734 aaKnown RBP13.85□□□□□ -0.19
ERBB2-207ENST00000578502 KIF13BQ9NQT8 1826 aa13.85□□□□□ -0.19
ERBB2-207ENST00000578502 LAMB4A4D0S4 1761 aa13.84□□□□□ -0.19
ERBB2-207ENST00000578502 C10orf71Q711Q0 1435 aa13.84□□□□□ -0.19
ERBB2-207ENST00000578502 A0A0G2JLW4 131 aa13.84□□□□□ -0.19
ERBB2-207ENST00000578502 AFDNP55196 1824 aaKnown RBP13.84□□□□□ -0.19
ERBB2-207ENST00000578502 SCN7AQ01118 1682 aa13.83□□□□□ -0.2
ERBB2-207ENST00000578502 PXDNLA1KZ92 1463 aa13.83□□□□□ -0.2
ERBB2-207ENST00000578502 A0A087WZG4 1122 aa13.83□□□□□ -0.2
ERBB2-207ENST00000578502 CAMTA2O94983 1202 aa13.83□□□□□ -0.2
ERBB2-207ENST00000578502 LMOD3Q0VAK6 560 aa13.83□□□□□ -0.2
ERBB2-207ENST00000578502 TBC1D9BQ66K14 1250 aa13.83□□□□□ -0.2
ERBB2-207ENST00000578502 NGEFQ8N5V2 710 aa13.83□□□□□ -0.2
ERBB2-207ENST00000578502 DPEP1P16444 411 aa13.82□□□□□ -0.2
ERBB2-207ENST00000578502 DZIP3Q86Y13 1208 aaKnown RBP13.82□□□□□ -0.2
ERBB2-207ENST00000578502 CCDC24Q8N4L8 307 aa13.82□□□□□ -0.2
ERBB2-207ENST00000578502 BCORQ6W2J9 1755 aa13.81□□□□□ -0.2
ERBB2-207ENST00000578502 CHL1O00533 1208 aa13.81□□□□□ -0.2
ERBB2-207ENST00000578502 MYL6BP14649 208 aa13.81□□□□□ -0.2
ERBB2-207ENST00000578502 NECTIN2Q92692 538 aa13.81□□□□□ -0.2
ERBB2-207ENST00000578502 CARMIL3Q8ND23 1372 aa13.81□□□□□ -0.2
ERBB2-207ENST00000578502 ANXA1P04083 346 aa13.8□□□□□ -0.2
ERBB2-207ENST00000578502 SERPINB2P05120 415 aa13.8□□□□□ -0.2
ERBB2-207ENST00000578502 EIF2S2P20042 333 aaKnown RBP13.8□□□□□ -0.2
ERBB2-207ENST00000578502 YY1P25490 414 aa13.8□□□□□ -0.2
ERBB2-207ENST00000578502 CHRNA5P30532 468 aa13.8□□□□□ -0.2
ERBB2-207ENST00000578502 PROSER3Q2NL68 480 aa13.8□□□□□ -0.2
ERBB2-207ENST00000578502 NRXN2Q9P2S2 1712 aa13.79□□□□□ -0.2
ERBB2-207ENST00000578502 KCNA3P22001 575 aa13.79□□□□□ -0.2
ERBB2-207ENST00000578502 PDIA6Q15084 440 aa13.79□□□□□ -0.2
ERBB2-207ENST00000578502 HLFQ16534 295 aa13.79□□□□□ -0.2
ERBB2-207ENST00000578502 TTLL7Q6ZT98 887 aa13.79□□□□□ -0.2
ERBB2-207ENST00000578502 TGFB2P61812 414 aa13.78□□□□□ -0.2
ERBB2-207ENST00000578502 NPM2Q86SE8 214 aaKnown RBP13.78□□□□□ -0.2
ERBB2-207ENST00000578502 MBIPQ9NS73 344 aa13.78□□□□□ -0.2
ERBB2-207ENST00000578502 BABAM1Q9NWV8 329 aa13.78□□□□□ -0.2
ERBB2-207ENST00000578502 SALL2Q9Y467 1007 aaPredicted RBP13.78□□□□□ -0.2
ERBB2-207ENST00000578502 ZNF853P0CG23 659 aa13.77□□□□□ -0.21
ERBB2-207ENST00000578502 BRCA1P38398 1863 aaKnown RBP13.77□□□□□ -0.21
ERBB2-207ENST00000578502 CHD4Q14839 1912 aa13.77□□□□□ -0.21
ERBB2-207ENST00000578502 LRP10Q7Z4F1 713 aa13.77□□□□□ -0.21
ERBB2-207ENST00000578502 FAM9BQ8IZU0 186 aa13.77□□□□□ -0.21
ERBB2-207ENST00000578502 CFAP44Q96MT7 982 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms