RNA–Protein interactions for RNA: ENST00000578441.5

CTC1-204, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-204ENST00000578441 ARHGAP27Q6ZUM4 889 aa13.67□□□□□ -0.22
CTC1-204ENST00000578441 C16orf71Q8IYS4 520 aaPredicted RBP13.67□□□□□ -0.22
CTC1-204ENST00000578441 SRP68Q9UHB9 627 aaKnown RBP13.67□□□□□ -0.22
CTC1-204ENST00000578441 KDM2BQ8NHM5 1336 aa13.66□□□□□ -0.22
CTC1-204ENST00000578441 POLRMTO00411 1230 aaKnown RBP13.66□□□□□ -0.22
CTC1-204ENST00000578441 CYP19A1P11511 503 aaPredicted RBP13.66□□□□□ -0.22
CTC1-204ENST00000578441 DDR1Q08345 913 aa13.66□□□□□ -0.22
CTC1-204ENST00000578441 DALRD3Q5D0E6 543 aaKnown RBP13.66□□□□□ -0.22
CTC1-204ENST00000578441 TNS4Q8IZW8 715 aa13.66□□□□□ -0.22
CTC1-204ENST00000578441 LGR6Q9HBX8 967 aa13.66□□□□□ -0.22
CTC1-204ENST00000578441 DLEC1Q9Y238 1755 aa13.66□□□□□ -0.22
CTC1-204ENST00000578441 DNAJC10Q8IXB1 793 aa13.65□□□□□ -0.22
CTC1-204ENST00000578441 NARFQ9UHQ1 456 aa13.65□□□□□ -0.22
CTC1-204ENST00000578441 COL15A1P39059 1388 aa13.65□□□□□ -0.22
CTC1-204ENST00000578441 ZC3H4Q9UPT8 1303 aaKnown RBP13.64□□□□□ -0.23
CTC1-204ENST00000578441 AFDNP55196 1824 aaKnown RBP13.64□□□□□ -0.23
CTC1-204ENST00000578441 TNRC6CQ9HCJ0 1690 aaKnown RBP13.64□□□□□ -0.23
CTC1-204ENST00000578441 HMOX1P09601 288 aa13.64□□□□□ -0.23
CTC1-204ENST00000578441 MTHFSDQ2M296 383 aaKnown RBP13.64□□□□□ -0.23
CTC1-204ENST00000578441 USPL1Q5W0Q7 1092 aa13.64□□□□□ -0.23
CTC1-204ENST00000578441 COL3A1P02461 1466 aaPredicted RBP13.63□□□□□ -0.23
CTC1-204ENST00000578441 C9orf131Q5VYM1 1079 aa13.63□□□□□ -0.23
CTC1-204ENST00000578441 SMC1BQ8NDV3 1235 aa13.63□□□□□ -0.23
CTC1-204ENST00000578441 SBF1O95248 1867 aa13.63□□□□□ -0.23
CTC1-204ENST00000578441 SIPA1L3O60292 1781 aaPredicted RBP13.63□□□□□ -0.23
CTC1-204ENST00000578441 STARD3NLO95772 234 aa13.62□□□□□ -0.23
CTC1-204ENST00000578441 SLC39A6Q13433 755 aa13.62□□□□□ -0.23
CTC1-204ENST00000578441 TTC5Q8N0Z6 440 aa13.62□□□□□ -0.23
CTC1-204ENST00000578441 TEX13AQ9BXU3 409 aaPredicted RBP13.62□□□□□ -0.23
CTC1-204ENST00000578441 ZBTB1Q9Y2K1 713 aa13.62□□□□□ -0.23
CTC1-204ENST00000578441 PCNTO95613 3336 aa13.62□□□□□ -0.23
CTC1-204ENST00000578441 A0A087WZG4 1122 aa13.61□□□□□ -0.23
CTC1-204ENST00000578441 NFIXQ14938 502 aa13.61□□□□□ -0.23
CTC1-204ENST00000578441 GAS2L2Q8NHY3 880 aa13.61□□□□□ -0.23
CTC1-204ENST00000578441 PDZRN3Q9UPQ7 1066 aa13.61□□□□□ -0.23
CTC1-204ENST00000578441 SCN7AQ01118 1682 aa13.6□□□□□ -0.23
CTC1-204ENST00000578441 GNAT3A8MTJ3 354 aa13.6□□□□□ -0.23
CTC1-204ENST00000578441 CHRNA5P30532 468 aa13.6□□□□□ -0.23
CTC1-204ENST00000578441 HTRA3P83110 453 aa13.6□□□□□ -0.23
CTC1-204ENST00000578441 TEFQ10587 303 aa13.6□□□□□ -0.23
CTC1-204ENST00000578441 CC2D1BQ5T0F9 858 aaKnown RBP13.6□□□□□ -0.23
CTC1-204ENST00000578441 EIF5P55010 431 aaKnown RBP13.59□□□□□ -0.23
CTC1-204ENST00000578441 ZNF790Q6PG37 636 aa13.59□□□□□ -0.23
CTC1-204ENST00000578441 RNF181Q9P0P0 153 aa13.59□□□□□ -0.23
CTC1-204ENST00000578441 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.23
CTC1-204ENST00000578441 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.23
CTC1-204ENST00000578441 SERPINB2P05120 415 aa13.58□□□□□ -0.24
CTC1-204ENST00000578441 BCL2L12Q9HB09 334 aa13.58□□□□□ -0.24
CTC1-204ENST00000578441 CAPN15O75808 1086 aa13.57□□□□□ -0.24
CTC1-204ENST00000578441 LMNB1P20700 586 aa13.57□□□□□ -0.24
CTC1-204ENST00000578441 IL6STP40189 918 aaPredicted RBP13.57□□□□□ -0.24
CTC1-204ENST00000578441 TTLL6Q8N841 843 aa13.57□□□□□ -0.24
CTC1-204ENST00000578441 RRAGCQ9HB90 399 aa13.57□□□□□ -0.24
CTC1-204ENST00000578441 CARMIL3Q8ND23 1372 aa13.57□□□□□ -0.24
CTC1-204ENST00000578441 H0YIN7 160 aa13.56□□□□□ -0.24
CTC1-204ENST00000578441 U2SURPO15042 1029 aaKnown RBP13.56□□□□□ -0.24
CTC1-204ENST00000578441 CANXP27824 592 aaKnown RBP13.56□□□□□ -0.24
CTC1-204ENST00000578441 IL17REQ8NFR9 667 aa13.56□□□□□ -0.24
CTC1-204ENST00000578441 ZNF496Q96IT1 587 aaPredicted RBP13.56□□□□□ -0.24
CTC1-204ENST00000578441 CFAP53Q96M91 514 aa13.56□□□□□ -0.24
CTC1-204ENST00000578441 FMNL2Q96PY5 1086 aa13.56□□□□□ -0.24
CTC1-204ENST00000578441 TIAM2Q8IVF5 1701 aa13.56□□□□□ -0.24
CTC1-204ENST00000578441 HSPA1AP0DMV8 641 aaKnown RBP13.55□□□□□ -0.24
CTC1-204ENST00000578441 HSPA1BP0DMV9 641 aaKnown RBP13.55□□□□□ -0.24
CTC1-204ENST00000578441 VEGFAP15692 232 aaPredicted RBP13.55□□□□□ -0.24
CTC1-204ENST00000578441 PDE6BP35913 854 aa13.55□□□□□ -0.24
CTC1-204ENST00000578441 NPM2Q86SE8 214 aaKnown RBP13.55□□□□□ -0.24
CTC1-204ENST00000578441 BRIP1Q9BX63 1249 aa13.55□□□□□ -0.24
CTC1-204ENST00000578441 BCORQ6W2J9 1755 aa13.55□□□□□ -0.24
CTC1-204ENST00000578441 C2CD5Q86YS7 1000 aa13.54□□□□□ -0.24
CTC1-204ENST00000578441 ANKRD31Q8N7Z5 1873 aa13.54□□□□□ -0.24
CTC1-204ENST00000578441 GLTPD2A6NH11 291 aa13.53□□□□□ -0.24
CTC1-204ENST00000578441 RGL2O15211 777 aa13.53□□□□□ -0.24
CTC1-204ENST00000578441 NUDCQ9Y266 331 aa13.53□□□□□ -0.24
CTC1-204ENST00000578441 TBC1D9BQ66K14 1250 aa13.52□□□□□ -0.25
CTC1-204ENST00000578441 RSPH6AQ9H0K4 717 aa13.52□□□□□ -0.25
CTC1-204ENST00000578441 ARFGEF2Q9Y6D5 1785 aa13.52□□□□□ -0.25
CTC1-204ENST00000578441 FER1L6Q2WGJ9 1857 aa13.52□□□□□ -0.25
CTC1-204ENST00000578441 CCDC88AQ3V6T2 1871 aa13.52□□□□□ -0.25
CTC1-204ENST00000578441 DICER1Q9UPY3 1922 aaKnown RBP13.52□□□□□ -0.25
CTC1-204ENST00000578441 COL11A2P13942 1736 aaPredicted RBP13.51□□□□□ -0.25
CTC1-204ENST00000578441 LTBP3Q9NS15 1303 aa13.51□□□□□ -0.25
CTC1-204ENST00000578441 BTBD11A6QL63 1104 aa13.51□□□□□ -0.25
CTC1-204ENST00000578441 SLC34A2O95436 690 aa13.51□□□□□ -0.25
CTC1-204ENST00000578441 PRKAR2BP31323 418 aa13.51□□□□□ -0.25
CTC1-204ENST00000578441 RASSF7Q02833 373 aa13.51□□□□□ -0.25
CTC1-204ENST00000578441 PRR5LQ6MZQ0 368 aa13.51□□□□□ -0.25
CTC1-204ENST00000578441 CLEC4GQ6UXB4 293 aa13.51□□□□□ -0.25
CTC1-204ENST00000578441 SETDB2Q96T68 719 aa13.51□□□□□ -0.25
CTC1-204ENST00000578441 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
CTC1-204ENST00000578441 SOGA3Q5TF21 947 aa13.5□□□□□ -0.25
CTC1-204ENST00000578441 DPY19L2Q6NUT2 758 aa13.5□□□□□ -0.25
CTC1-204ENST00000578441 BICDL1Q6ZP65 573 aa13.5□□□□□ -0.25
CTC1-204ENST00000578441 CNBD1Q8NA66 436 aa13.5□□□□□ -0.25
CTC1-204ENST00000578441 PHACTR3Q96KR7 559 aa13.5□□□□□ -0.25
CTC1-204ENST00000578441 NFKBIEO00221 500 aa13.49□□□□□ -0.25
CTC1-204ENST00000578441 CAMTA2O94983 1202 aa13.49□□□□□ -0.25
CTC1-204ENST00000578441 ST5P78524 1137 aa13.49□□□□□ -0.25
CTC1-204ENST00000578441 STYK1Q6J9G0 422 aa13.49□□□□□ -0.25
CTC1-204ENST00000578441 RTF1Q92541 710 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms