RNA–Protein interactions for RNA: ENST00000578194.5

CSNK1D-207, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-207ENST00000578194 TRAPPC3LQ5T215 181 aa16.58■□□□□ 0.24
CSNK1D-207ENST00000578194 INTS5Q6P9B9 1019 aaKnown RBP16.58■□□□□ 0.24
CSNK1D-207ENST00000578194 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-207ENST00000578194 C4AP0C0L4 1744 aa16.58■□□□□ 0.24
CSNK1D-207ENST00000578194 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-207ENST00000578194 PPP1R1BQ9UD71 204 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-207ENST00000578194 RFC4P35249 363 aa16.56■□□□□ 0.24
CSNK1D-207ENST00000578194 CCDC27Q2M243 656 aa16.56■□□□□ 0.24
CSNK1D-207ENST00000578194 AMIGO3Q86WK7 504 aa16.56■□□□□ 0.24
CSNK1D-207ENST00000578194 LAS1LQ9Y4W2 734 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-207ENST00000578194 SOS1Q07889 1333 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-207ENST00000578194 POLD1P28340 1107 aa16.55■□□□□ 0.24
CSNK1D-207ENST00000578194 EIF4A1P60842 406 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-207ENST00000578194 NGEFQ8N5V2 710 aa16.55■□□□□ 0.24
CSNK1D-207ENST00000578194 CHL1O00533 1208 aa16.54■□□□□ 0.24
CSNK1D-207ENST00000578194 CANXP27824 592 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-207ENST00000578194 GNAI1P63096 354 aa16.54■□□□□ 0.24
CSNK1D-207ENST00000578194 SMIM5Q71RC9 77 aa16.54■□□□□ 0.24
CSNK1D-207ENST00000578194 NPM2Q86SE8 214 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-207ENST00000578194 ARHGEF1Q92888 912 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-207ENST00000578194 CFAP44Q96MT7 982 aa16.54■□□□□ 0.24
CSNK1D-207ENST00000578194 ZBTB1Q9Y2K1 713 aa16.54■□□□□ 0.24
CSNK1D-207ENST00000578194 COL15A1P39059 1388 aa16.53■□□□□ 0.24
CSNK1D-207ENST00000578194 A0A087WZG4 1122 aa16.53■□□□□ 0.24
CSNK1D-207ENST00000578194 PTGER2P43116 358 aa16.53■□□□□ 0.24
CSNK1D-207ENST00000578194 IFT57Q9NWB7 429 aa16.53■□□□□ 0.24
CSNK1D-207ENST00000578194 USP16Q9Y5T5 823 aa16.53■□□□□ 0.24
CSNK1D-207ENST00000578194 GIGYF1O75420 1035 aaPredicted RBP16.52■□□□□ 0.24
CSNK1D-207ENST00000578194 IL6STP40189 918 aaPredicted RBP16.52■□□□□ 0.24
CSNK1D-207ENST00000578194 MSL1Q68DK7 614 aa16.52■□□□□ 0.24
CSNK1D-207ENST00000578194 SGIP1Q9BQI5 828 aa16.52■□□□□ 0.24
CSNK1D-207ENST00000578194 PRAMEF22A3QJZ6 481 aa16.51■□□□□ 0.23
CSNK1D-207ENST00000578194 ZPR1O75312 459 aa16.51■□□□□ 0.23
CSNK1D-207ENST00000578194 A1BGP04217 495 aa16.51■□□□□ 0.23
CSNK1D-207ENST00000578194 WWC1Q8IX03 1113 aa16.51■□□□□ 0.23
CSNK1D-207ENST00000578194 MIER1Q8N108 512 aa16.51■□□□□ 0.23
CSNK1D-207ENST00000578194 NLGN1Q8N2Q7 840 aa16.51■□□□□ 0.23
CSNK1D-207ENST00000578194 ARXQ96QS3 562 aa16.51■□□□□ 0.23
CSNK1D-207ENST00000578194 USP42Q9H9J4 1324 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-207ENST00000578194 EIF5P55010 431 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-207ENST00000578194 ZNF330Q9Y3S2 320 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-207ENST00000578194 IL16Q14005 1332 aa16.49■□□□□ 0.23
CSNK1D-207ENST00000578194 SENP3-EIF4A1A0A087X0R7 540 aa16.49■□□□□ 0.23
CSNK1D-207ENST00000578194 ZNF853P0CG23 659 aa16.49■□□□□ 0.23
CSNK1D-207ENST00000578194 MBIPQ9NS73 344 aa16.49■□□□□ 0.23
CSNK1D-207ENST00000578194 SALL2Q9Y467 1007 aaPredicted RBP16.49■□□□□ 0.23
CSNK1D-207ENST00000578194 ERBB4Q15303 1308 aa16.48■□□□□ 0.23
CSNK1D-207ENST00000578194 GYS1P13807 737 aa16.48■□□□□ 0.23
CSNK1D-207ENST00000578194 NARFQ9UHQ1 456 aa16.48■□□□□ 0.23
CSNK1D-207ENST00000578194 SCN7AQ01118 1682 aa16.48■□□□□ 0.23
CSNK1D-207ENST00000578194 HOXB7P09629 217 aa16.47■□□□□ 0.23
CSNK1D-207ENST00000578194 WDR63Q8IWG1 891 aa16.47■□□□□ 0.23
CSNK1D-207ENST00000578194 SRP68Q9UHB9 627 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-207ENST00000578194 BCORQ6W2J9 1755 aa16.46■□□□□ 0.23
CSNK1D-207ENST00000578194 USPL1Q5W0Q7 1092 aa16.46■□□□□ 0.23
CSNK1D-207ENST00000578194 NBPF26B4DH59 902 aa16.45■□□□□ 0.22
CSNK1D-207ENST00000578194 MMP10P09238 476 aa16.45■□□□□ 0.22
CSNK1D-207ENST00000578194 EIF2S2P20042 333 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-207ENST00000578194 PIP4K2AP48426 406 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-207ENST00000578194 NBPF10Q6P3W6 841 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-207ENST00000578194 DZIP3Q86Y13 1208 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-207ENST00000578194 NBPF15Q8N660 670 aa16.45■□□□□ 0.22
CSNK1D-207ENST00000578194 CHMP4AQ9BY43 222 aa16.44■□□□□ 0.22
CSNK1D-207ENST00000578194 TBC1D2BQ9UPU7 963 aa16.44■□□□□ 0.22
CSNK1D-207ENST00000578194 FKBP8Q14318 412 aa16.43■□□□□ 0.22
CSNK1D-207ENST00000578194 KRT24Q2M2I5 525 aa16.43■□□□□ 0.22
CSNK1D-207ENST00000578194 DUSP27Q5VZP5 1158 aa16.43■□□□□ 0.22
CSNK1D-207ENST00000578194 KLHL34Q8N239 644 aa16.43■□□□□ 0.22
CSNK1D-207ENST00000578194 FHDC1Q9C0D6 1143 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-207ENST00000578194 PARP3Q9Y6F1 533 aa16.43■□□□□ 0.22
CSNK1D-207ENST00000578194 MYL6BP14649 208 aa16.42■□□□□ 0.22
CSNK1D-207ENST00000578194 HDGFL1Q5TGJ6 251 aa16.42■□□□□ 0.22
CSNK1D-207ENST00000578194 MYH16Q9H6N6 1097 aa16.42■□□□□ 0.22
CSNK1D-207ENST00000578194 ZNF652Q9Y2D9 606 aa16.42■□□□□ 0.22
CSNK1D-207ENST00000578194 RGL2O15211 777 aa16.41■□□□□ 0.22
CSNK1D-207ENST00000578194 CAMTA2O94983 1202 aa16.41■□□□□ 0.22
CSNK1D-207ENST00000578194 KIF6Q6ZMV9 814 aa16.41■□□□□ 0.22
CSNK1D-207ENST00000578194 TSR2Q969E8 191 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-207ENST00000578194 GOLGA2Q08379 1002 aa16.4■□□□□ 0.22
CSNK1D-207ENST00000578194 NECTIN2Q92692 538 aa16.4■□□□□ 0.22
CSNK1D-207ENST00000578194 SYT17Q9BSW7 474 aa16.4■□□□□ 0.22
CSNK1D-207ENST00000578194 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
CSNK1D-207ENST00000578194 DDX21Q9NR30 783 aaKnown RBP eCLIP16.4■□□□□ 0.226e-8■■□□□ 13.9
CSNK1D-207ENST00000578194 CD2APQ9Y5K6 639 aa16.4■□□□□ 0.22
CSNK1D-207ENST00000578194 NUP98P52948 1817 aa16.4■□□□□ 0.22
CSNK1D-207ENST00000578194 AFDNP55196 1824 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-207ENST00000578194 KIF13BQ9NQT8 1826 aa16.4■□□□□ 0.22
CSNK1D-207ENST00000578194 ELL2O00472 640 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-207ENST00000578194 TM4SF1P30408 202 aa16.39■□□□□ 0.21
CSNK1D-207ENST00000578194 NFIXQ14938 502 aa16.39■□□□□ 0.21
CSNK1D-207ENST00000578194 CLEC4GQ6UXB4 293 aa16.39■□□□□ 0.21
CSNK1D-207ENST00000578194 C8orf58Q8NAV2 365 aa16.39■□□□□ 0.21
CSNK1D-207ENST00000578194 DBF4Q9UBU7 674 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-207ENST00000578194 ZNF521Q96K83 1311 aa16.39■□□□□ 0.21
CSNK1D-207ENST00000578194 FANCIQ9NVI1 1328 aa16.39■□□□□ 0.21
CSNK1D-207ENST00000578194 DDR1Q08345 913 aa16.38■□□□□ 0.21
CSNK1D-207ENST00000578194 PDIA6Q15084 440 aa16.38■□□□□ 0.21
CSNK1D-207ENST00000578194 CACNA1FO60840 1977 aa16.38■□□□□ 0.21
CSNK1D-207ENST00000578194 NRXN2Q9P2S2 1712 aa16.37■□□□□ 0.21
CSNK1D-207ENST00000578194 DCAF8L1A6NGE4 600 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms