RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 RSPH6AQ9H0K4 717 aa22.34■■□□□ 1.17
CDK5RAP3-206ENST00000578018 CEMIPQ8WUJ3 1361 aa22.34■■□□□ 1.17
CDK5RAP3-206ENST00000578018 NRXN2Q9P2S2 1712 aa22.34■■□□□ 1.17
CDK5RAP3-206ENST00000578018 POLRMTO00411 1230 aaKnown RBP22.33■■□□□ 1.17
CDK5RAP3-206ENST00000578018 PPP2R1AP30153 589 aa22.33■■□□□ 1.17
CDK5RAP3-206ENST00000578018 TM4SF1P30408 202 aa22.33■■□□□ 1.17
CDK5RAP3-206ENST00000578018 PRKAR2BP31323 418 aa22.33■■□□□ 1.17
CDK5RAP3-206ENST00000578018 TEFQ10587 303 aa22.33■■□□□ 1.17
CDK5RAP3-206ENST00000578018 PHACTR3Q96KR7 559 aa22.33■■□□□ 1.17
CDK5RAP3-206ENST00000578018 NARFQ9UHQ1 456 aa22.33■■□□□ 1.17
CDK5RAP3-206ENST00000578018 KCNA3P22001 575 aa22.32■■□□□ 1.16
CDK5RAP3-206ENST00000578018 GPBP1L1Q9HC44 474 aaPredicted RBP22.32■■□□□ 1.16
CDK5RAP3-206ENST00000578018 SCN7AQ01118 1682 aa22.31■■□□□ 1.16
CDK5RAP3-206ENST00000578018 HEG1Q9ULI3 1381 aa22.31■■□□□ 1.16
CDK5RAP3-206ENST00000578018 ZNF790Q6PG37 636 aa22.31■■□□□ 1.16
CDK5RAP3-206ENST00000578018 ZNF496Q96IT1 587 aaPredicted RBP22.31■■□□□ 1.16
CDK5RAP3-206ENST00000578018 ZNF526Q8TF50 670 aaPredicted RBP22.3■■□□□ 1.16
CDK5RAP3-206ENST00000578018 FCHSD2O94868 740 aa22.29■■□□□ 1.16
CDK5RAP3-206ENST00000578018 NFIXQ14938 502 aa22.29■■□□□ 1.16
CDK5RAP3-206ENST00000578018 BCL2L12Q9HB09 334 aa22.29■■□□□ 1.16
CDK5RAP3-206ENST00000578018 NUDCQ9Y266 331 aa22.29■■□□□ 1.16
CDK5RAP3-206ENST00000578018 DLEC1Q9Y238 1755 aa22.28■■□□□ 1.16
CDK5RAP3-206ENST00000578018 STARD3NLO95772 234 aa22.28■■□□□ 1.16
CDK5RAP3-206ENST00000578018 CANXP27824 592 aaKnown RBP22.28■■□□□ 1.16
CDK5RAP3-206ENST00000578018 U2AF1L5P0DN76 240 aaPredicted RBP22.27■■□□□ 1.16
CDK5RAP3-206ENST00000578018 EIF5P55010 431 aaKnown RBP22.27■■□□□ 1.16
CDK5RAP3-206ENST00000578018 U2AF1Q01081 240 aaKnown RBP eCLIP22.27■■□□□ 1.16
CDK5RAP3-206ENST00000578018 PIM2Q9P1W9 311 aa22.27■■□□□ 1.16
CDK5RAP3-206ENST00000578018 ARHGAP27Q6ZUM4 889 aa22.26■■□□□ 1.15
CDK5RAP3-206ENST00000578018 CEP350Q5VT06 3117 aa22.25■■□□□ 1.15
CDK5RAP3-206ENST00000578018 CHRNA5P30532 468 aa22.25■■□□□ 1.15
CDK5RAP3-206ENST00000578018 FMNL2Q96PY5 1086 aa22.25■■□□□ 1.15
CDK5RAP3-206ENST00000578018 TEX13AQ9BXU3 409 aaPredicted RBP22.25■■□□□ 1.15
CDK5RAP3-206ENST00000578018 DALRD3Q5D0E6 543 aaKnown RBP22.24■■□□□ 1.15
CDK5RAP3-206ENST00000578018 A0A087WZG4 1122 aa22.23■■□□□ 1.15
CDK5RAP3-206ENST00000578018 KCNQ3O43525 872 aa22.23■■□□□ 1.15
CDK5RAP3-206ENST00000578018 BCORQ6W2J9 1755 aa22.22■■□□□ 1.15
CDK5RAP3-206ENST00000578018 BTBD11A6QL63 1104 aa22.22■■□□□ 1.15
CDK5RAP3-206ENST00000578018 SERPINB2P05120 415 aa22.22■■□□□ 1.15
CDK5RAP3-206ENST00000578018 ANKRD31Q8N7Z5 1873 aa22.22■■□□□ 1.15
CDK5RAP3-206ENST00000578018 SBF1O95248 1867 aa22.21■■□□□ 1.15
CDK5RAP3-206ENST00000578018 CARMIL3Q8ND23 1372 aa22.21■■□□□ 1.15
CDK5RAP3-206ENST00000578018 DLG5Q8TDM6 1919 aa22.2■■□□□ 1.14
CDK5RAP3-206ENST00000578018 KIF3CO14782 793 aa22.2■■□□□ 1.14
CDK5RAP3-206ENST00000578018 IL6STP40189 918 aaPredicted RBP22.2■■□□□ 1.14
CDK5RAP3-206ENST00000578018 MCM10Q7L590 875 aa22.2■■□□□ 1.14
CDK5RAP3-206ENST00000578018 RTF1Q92541 710 aaKnown RBP22.19■■□□□ 1.14
CDK5RAP3-206ENST00000578018 ZNF330Q9Y3S2 320 aaPredicted RBP22.19■■□□□ 1.14
CDK5RAP3-206ENST00000578018 A1BGP04217 495 aa22.18■■□□□ 1.14
CDK5RAP3-206ENST00000578018 C9orf131Q5VYM1 1079 aa22.18■■□□□ 1.14
CDK5RAP3-206ENST00000578018 TBC1D9BQ66K14 1250 aa22.17■■□□□ 1.14
CDK5RAP3-206ENST00000578018 BICDL1Q6ZP65 573 aa22.17■■□□□ 1.14
CDK5RAP3-206ENST00000578018 TBC1D2BQ9UPU7 963 aa22.17■■□□□ 1.14
CDK5RAP3-206ENST00000578018 COL11A2P13942 1736 aaPredicted RBP22.17■■□□□ 1.14
CDK5RAP3-206ENST00000578018 HTATSF1O43719 755 aaKnown RBP22.16■■□□□ 1.14
CDK5RAP3-206ENST00000578018 DCTN1Q14203 1278 aa22.16■■□□□ 1.14
CDK5RAP3-206ENST00000578018 LAMB4A4D0S4 1761 aa22.15■■□□□ 1.14
CDK5RAP3-206ENST00000578018 USP16Q9Y5T5 823 aa22.15■■□□□ 1.14
CDK5RAP3-206ENST00000578018 PRAMEF22A3QJZ6 481 aa22.14■■□□□ 1.13
CDK5RAP3-206ENST00000578018 CAMTA2O94983 1202 aa22.14■■□□□ 1.13
CDK5RAP3-206ENST00000578018 C2CD5Q86YS7 1000 aa22.14■■□□□ 1.13
CDK5RAP3-206ENST00000578018 KDM3BQ7LBC6 1761 aa22.14■■□□□ 1.13
CDK5RAP3-206ENST00000578018 HSPA6P17066 643 aa22.13■■□□□ 1.13
CDK5RAP3-206ENST00000578018 SNRPA1P09661 255 aaKnown RBP22.12■■□□□ 1.13
CDK5RAP3-206ENST00000578018 PIP4K2AP48426 406 aaPredicted RBP22.12■■□□□ 1.13
CDK5RAP3-206ENST00000578018 PRR5LQ6MZQ0 368 aa22.12■■□□□ 1.13
CDK5RAP3-206ENST00000578018 NPM2Q86SE8 214 aaKnown RBP22.12■■□□□ 1.13
CDK5RAP3-206ENST00000578018 NMRK2Q9NPI5 230 aa22.12■■□□□ 1.13
CDK5RAP3-206ENST00000578018 RNF181Q9P0P0 153 aa22.12■■□□□ 1.13
CDK5RAP3-206ENST00000578018 H0YIN7 160 aa22.11■■□□□ 1.13
CDK5RAP3-206ENST00000578018 DZIP3Q86Y13 1208 aaKnown RBP22.11■■□□□ 1.13
CDK5RAP3-206ENST00000578018 TTLL6Q8N841 843 aa22.11■■□□□ 1.13
CDK5RAP3-206ENST00000578018 RASSF7Q02833 373 aa22.1■■□□□ 1.13
CDK5RAP3-206ENST00000578018 PLEKHF1Q96S99 279 aa22.1■■□□□ 1.13
CDK5RAP3-206ENST00000578018 TNRC6CQ9HCJ0 1690 aaKnown RBP22.1■■□□□ 1.13
CDK5RAP3-206ENST00000578018 CCDC88AQ3V6T2 1871 aa22.09■■□□□ 1.13
CDK5RAP3-206ENST00000578018 TIAM2Q8IVF5 1701 aa22.09■■□□□ 1.13
CDK5RAP3-206ENST00000578018 TAF7Q15545 349 aaPredicted RBP22.09■■□□□ 1.13
CDK5RAP3-206ENST00000578018 BRIP1Q9BX63 1249 aa22.09■■□□□ 1.13
CDK5RAP3-206ENST00000578018 NEFMP07197 916 aa22.08■■□□□ 1.13
CDK5RAP3-206ENST00000578018 CCDC24Q8N4L8 307 aa22.08■■□□□ 1.13
CDK5RAP3-206ENST00000578018 SETDB2Q96T68 719 aa22.08■■□□□ 1.13
CDK5RAP3-206ENST00000578018 ARFGEF2Q9Y6D5 1785 aa22.07■■□□□ 1.12
CDK5RAP3-206ENST00000578018 CACNA1SQ13698 1873 aa22.07■■□□□ 1.12
CDK5RAP3-206ENST00000578018 NBPF26B4DH59 902 aa22.07■■□□□ 1.12
CDK5RAP3-206ENST00000578018 TOMM70O94826 608 aa22.07■■□□□ 1.12
CDK5RAP3-206ENST00000578018 PDE6BP35913 854 aa22.07■■□□□ 1.12
CDK5RAP3-206ENST00000578018 NBPF10Q6P3W6 841 aaKnown RBP22.07■■□□□ 1.12
CDK5RAP3-206ENST00000578018 NBPF15Q8N660 670 aa22.07■■□□□ 1.12
CDK5RAP3-206ENST00000578018 CNBD1Q8NA66 436 aa22.07■■□□□ 1.12
CDK5RAP3-206ENST00000578018 PDZRN3Q9UPQ7 1066 aa22.07■■□□□ 1.12
CDK5RAP3-206ENST00000578018 NFE2L2Q16236 605 aa22.06■■□□□ 1.12
CDK5RAP3-206ENST00000578018 MIS18AQ9NYP9 233 aa22.06■■□□□ 1.12
CDK5RAP3-206ENST00000578018 FER1L6Q2WGJ9 1857 aa22.06■■□□□ 1.12
CDK5RAP3-206ENST00000578018 KDM2BQ8NHM5 1336 aa22.06■■□□□ 1.12
CDK5RAP3-206ENST00000578018 ZC3H4Q9UPT8 1303 aaKnown RBP22.06■■□□□ 1.12
CDK5RAP3-206ENST00000578018 PRELPP51888 382 aa22.05■■□□□ 1.12
CDK5RAP3-206ENST00000578018 CLEC4GQ6UXB4 293 aa22.05■■□□□ 1.12
CDK5RAP3-206ENST00000578018 NFKBIEO00221 500 aa22.04■■□□□ 1.12
CDK5RAP3-206ENST00000578018 LMNB1P20700 586 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms