RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 MIS18AQ9NYP9 233 aa18.15■□□□□ 0.5
SNORD3B-1-201ENST00000577988 PDGFDQ9GZP0 370 aaPredicted RBP18.14■□□□□ 0.49
SNORD3B-1-201ENST00000577988 MSH5O43196 834 aa18.13■□□□□ 0.49
SNORD3B-1-201ENST00000577988 GNAI1P63096 354 aa18.13■□□□□ 0.49
SNORD3B-1-201ENST00000577988 LRP5O75197 1615 aa18.12■□□□□ 0.49
SNORD3B-1-201ENST00000577988 GIGYF1O75420 1035 aaPredicted RBP18.12■□□□□ 0.49
SNORD3B-1-201ENST00000577988 MIER1Q8N108 512 aa18.12■□□□□ 0.49
SNORD3B-1-201ENST00000577988 IFT57Q9NWB7 429 aa18.12■□□□□ 0.49
SNORD3B-1-201ENST00000577988 PHF14O94880 888 aa18.11■□□□□ 0.49
SNORD3B-1-201ENST00000577988 ZBTB7AO95365 584 aa18.11■□□□□ 0.49
SNORD3B-1-201ENST00000577988 ZNF853P0CG23 659 aa18.11■□□□□ 0.49
SNORD3B-1-201ENST00000577988 WWC1Q8IX03 1113 aa18.11■□□□□ 0.49
SNORD3B-1-201ENST00000577988 USP16Q9Y5T5 823 aa18.11■□□□□ 0.49
SNORD3B-1-201ENST00000577988 SOS1Q07889 1333 aaPredicted RBP18.1■□□□□ 0.49
SNORD3B-1-201ENST00000577988 IL16Q14005 1332 aa18.1■□□□□ 0.49
SNORD3B-1-201ENST00000577988 A0A087WZG4 1122 aa18.1■□□□□ 0.49
SNORD3B-1-201ENST00000577988 RFC4P35249 363 aa18.1■□□□□ 0.49
SNORD3B-1-201ENST00000577988 IL6STP40189 918 aaPredicted RBP18.1■□□□□ 0.49
SNORD3B-1-201ENST00000577988 AMIGO3Q86WK7 504 aa18.1■□□□□ 0.49
SNORD3B-1-201ENST00000577988 WDR63Q8IWG1 891 aa18.1■□□□□ 0.49
SNORD3B-1-201ENST00000577988 ARHGEF1Q92888 912 aaKnown RBP18.1■□□□□ 0.49
SNORD3B-1-201ENST00000577988 ATF5Q9Y2D1 282 aaPredicted RBP18.1■□□□□ 0.49
SNORD3B-1-201ENST00000577988 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
SNORD3B-1-201ENST00000577988 ZBTB1Q9Y2K1 713 aa18.09■□□□□ 0.49
SNORD3B-1-201ENST00000577988 LAS1LQ9Y4W2 734 aaKnown RBP18.09■□□□□ 0.49
SNORD3B-1-201ENST00000577988 COL24A1Q17RW2 1714 aa18.09■□□□□ 0.49
SNORD3B-1-201ENST00000577988 POLD1P28340 1107 aa18.08■□□□□ 0.48
SNORD3B-1-201ENST00000577988 EIF5P55010 431 aaKnown RBP18.08■□□□□ 0.48
SNORD3B-1-201ENST00000577988 NLGN1Q8N2Q7 840 aa18.08■□□□□ 0.48
SNORD3B-1-201ENST00000577988 ERBB4Q15303 1308 aa18.07■□□□□ 0.48
SNORD3B-1-201ENST00000577988 A1BGP04217 495 aa18.07■□□□□ 0.48
SNORD3B-1-201ENST00000577988 HOXB7P09629 217 aa18.07■□□□□ 0.48
SNORD3B-1-201ENST00000577988 CANXP27824 592 aaKnown RBP18.07■□□□□ 0.48
SNORD3B-1-201ENST00000577988 PTGER2P43116 358 aa18.07■□□□□ 0.48
SNORD3B-1-201ENST00000577988 SGIP1Q9BQI5 828 aa18.07■□□□□ 0.48
SNORD3B-1-201ENST00000577988 CHMP4AQ9BY43 222 aa18.07■□□□□ 0.48
SNORD3B-1-201ENST00000577988 MBIPQ9NS73 344 aa18.06■□□□□ 0.48
SNORD3B-1-201ENST00000577988 COL15A1P39059 1388 aa18.05■□□□□ 0.48
SNORD3B-1-201ENST00000577988 LAMB4A4D0S4 1761 aa18.05■□□□□ 0.48
SNORD3B-1-201ENST00000577988 PRAMEF22A3QJZ6 481 aa18.05■□□□□ 0.48
SNORD3B-1-201ENST00000577988 ZPR1O75312 459 aa18.05■□□□□ 0.48
SNORD3B-1-201ENST00000577988 SMIM5Q71RC9 77 aa18.05■□□□□ 0.48
SNORD3B-1-201ENST00000577988 PPP1R1BQ9UD71 204 aaPredicted RBP18.05■□□□□ 0.48
SNORD3B-1-201ENST00000577988 NARFQ9UHQ1 456 aa18.05■□□□□ 0.48
SNORD3B-1-201ENST00000577988 USP42Q9H9J4 1324 aaKnown RBP18.04■□□□□ 0.48
SNORD3B-1-201ENST00000577988 RGL2O15211 777 aa18.03■□□□□ 0.48
SNORD3B-1-201ENST00000577988 GYS1P13807 737 aa18.03■□□□□ 0.48
SNORD3B-1-201ENST00000577988 ARXQ96QS3 562 aa18.03■□□□□ 0.48
SNORD3B-1-201ENST00000577988 C4AP0C0L4 1744 aa18.02■□□□□ 0.48
SNORD3B-1-201ENST00000577988 SALL2Q9Y467 1007 aaPredicted RBP18.02■□□□□ 0.48
SNORD3B-1-201ENST00000577988 NBPF26B4DH59 902 aa18.01■□□□□ 0.47
SNORD3B-1-201ENST00000577988 DUSP27Q5VZP5 1158 aa18.01■□□□□ 0.47
SNORD3B-1-201ENST00000577988 NBPF10Q6P3W6 841 aaKnown RBP18.01■□□□□ 0.47
SNORD3B-1-201ENST00000577988 NBPF15Q8N660 670 aa18.01■□□□□ 0.47
SNORD3B-1-201ENST00000577988 MSL1Q68DK7 614 aa18■□□□□ 0.47
SNORD3B-1-201ENST00000577988 EIF2S2P20042 333 aaKnown RBP17.99■□□□□ 0.47
SNORD3B-1-201ENST00000577988 USPL1Q5W0Q7 1092 aa17.99■□□□□ 0.47
SNORD3B-1-201ENST00000577988 CLEC4GQ6UXB4 293 aa17.99■□□□□ 0.47
SNORD3B-1-201ENST00000577988 DZIP3Q86Y13 1208 aaKnown RBP17.99■□□□□ 0.47
SNORD3B-1-201ENST00000577988 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
SNORD3B-1-201ENST00000577988 SRP68Q9UHB9 627 aaKnown RBP17.99■□□□□ 0.47
SNORD3B-1-201ENST00000577988 ZNF330Q9Y3S2 320 aaPredicted RBP17.99■□□□□ 0.47
SNORD3B-1-201ENST00000577988 ZNF521Q96K83 1311 aa17.98■□□□□ 0.47
SNORD3B-1-201ENST00000577988 SENP3-EIF4A1A0A087X0R7 540 aa17.98■□□□□ 0.47
SNORD3B-1-201ENST00000577988 GOLGA2Q08379 1002 aa17.98■□□□□ 0.47
SNORD3B-1-201ENST00000577988 DDX21Q9NR30 783 aaKnown RBP eCLIP17.98■□□□□ 0.471e-36■■■■■ 138.5
SNORD3B-1-201ENST00000577988 MMP10P09238 476 aa17.97■□□□□ 0.47
SNORD3B-1-201ENST00000577988 TM4SF1P30408 202 aa17.97■□□□□ 0.47
SNORD3B-1-201ENST00000577988 KRT24Q2M2I5 525 aa17.97■□□□□ 0.47
SNORD3B-1-201ENST00000577988 HDGFL1Q5TGJ6 251 aa17.97■□□□□ 0.47
SNORD3B-1-201ENST00000577988 TBC1D2BQ9UPU7 963 aa17.97■□□□□ 0.47
SNORD3B-1-201ENST00000577988 ERVV-1B6SEH8 477 aa17.96■□□□□ 0.47
SNORD3B-1-201ENST00000577988 CAMTA2O94983 1202 aa17.96■□□□□ 0.47
SNORD3B-1-201ENST00000577988 FKBP8Q14318 412 aa17.96■□□□□ 0.47
SNORD3B-1-201ENST00000577988 PDIA6Q15084 440 aa17.96■□□□□ 0.47
SNORD3B-1-201ENST00000577988 BCL2L12Q9HB09 334 aa17.96■□□□□ 0.47
SNORD3B-1-201ENST00000577988 DBF4Q9UBU7 674 aaPredicted RBP17.96■□□□□ 0.47
SNORD3B-1-201ENST00000577988 ZNF652Q9Y2D9 606 aa17.96■□□□□ 0.47
SNORD3B-1-201ENST00000577988 PARP3Q9Y6F1 533 aa17.96■□□□□ 0.47
SNORD3B-1-201ENST00000577988 PIP4K2AP48426 406 aaPredicted RBP17.95■□□□□ 0.46
SNORD3B-1-201ENST00000577988 C8orf58Q8NAV2 365 aa17.95■□□□□ 0.46
SNORD3B-1-201ENST00000577988 TSR2Q969E8 191 aaKnown RBP17.95■□□□□ 0.46
SNORD3B-1-201ENST00000577988 CD2APQ9Y5K6 639 aa17.95■□□□□ 0.46
SNORD3B-1-201ENST00000577988 MYL6BP14649 208 aa17.94■□□□□ 0.46
SNORD3B-1-201ENST00000577988 CCDC30Q5VVM6 783 aa17.94■□□□□ 0.46
SNORD3B-1-201ENST00000577988 HYPKQ9NX55 129 aa17.94■□□□□ 0.46
SNORD3B-1-201ENST00000577988 FANCIQ9NVI1 1328 aa17.94■□□□□ 0.46
SNORD3B-1-201ENST00000577988 E9PSI1 815 aa17.93■□□□□ 0.46
SNORD3B-1-201ENST00000577988 ELL2O00472 640 aaPredicted RBP17.93■□□□□ 0.46
SNORD3B-1-201ENST00000577988 KIF6Q6ZMV9 814 aa17.93■□□□□ 0.46
SNORD3B-1-201ENST00000577988 LRP10Q7Z4F1 713 aa17.93■□□□□ 0.46
SNORD3B-1-201ENST00000577988 SYT17Q9BSW7 474 aa17.93■□□□□ 0.46
SNORD3B-1-201ENST00000577988 FHDC1Q9C0D6 1143 aaPredicted RBP17.93■□□□□ 0.46
SNORD3B-1-201ENST00000577988 CACNA1FO60840 1977 aa17.93■□□□□ 0.46
SNORD3B-1-201ENST00000577988 MAP3K15Q6ZN16 1313 aa17.93■□□□□ 0.46
SNORD3B-1-201ENST00000577988 NFIXQ14938 502 aa17.92■□□□□ 0.46
SNORD3B-1-201ENST00000577988 TWISTNBQ3B726 338 aaPredicted RBP17.92■□□□□ 0.46
SNORD3B-1-201ENST00000577988 SCN7AQ01118 1682 aa17.91■□□□□ 0.46
SNORD3B-1-201ENST00000577988 TSPYL6Q8N831 410 aa17.91■□□□□ 0.46
SNORD3B-1-201ENST00000577988 NECTIN2Q92692 538 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms