RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 PRIM1P49642 420 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-204ENST00000577664 CALD1Q05682 793 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-204ENST00000577664 TRMT2AQ8IZ69 625 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-204ENST00000577664 RTF1Q92541 710 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-204ENST00000577664 RRP7AQ9Y3A4 280 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-204ENST00000577664 DOT1LQ8TEK3 1739 aa14.56□□□□□ -0.08
CDK5RAP3-204ENST00000577664 ZNF853P0CG23 659 aa14.56□□□□□ -0.08
CDK5RAP3-204ENST00000577664 NEUROD2Q15784 382 aa14.56□□□□□ -0.08
CDK5RAP3-204ENST00000577664 C9orf131Q5VYM1 1079 aa14.56□□□□□ -0.08
CDK5RAP3-204ENST00000577664 ABHD8Q96I13 439 aa14.56□□□□□ -0.08
CDK5RAP3-204ENST00000577664 RRAGCQ9HB90 399 aa14.56□□□□□ -0.08
CDK5RAP3-204ENST00000577664 LGR6Q9HBX8 967 aa14.56□□□□□ -0.08
CDK5RAP3-204ENST00000577664 TAF1LQ8IZX4 1826 aa14.55□□□□□ -0.08
CDK5RAP3-204ENST00000577664 TGFB2P61812 414 aa14.55□□□□□ -0.08
CDK5RAP3-204ENST00000577664 DDX54Q8TDD1 881 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-204ENST00000577664 KDM6AO15550 1401 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-204ENST00000577664 TOGARAM1Q9Y4F4 1720 aa14.55□□□□□ -0.08
CDK5RAP3-204ENST00000577664 CHL1O00533 1208 aa14.54□□□□□ -0.08
CDK5RAP3-204ENST00000577664 GOLGA2Q08379 1002 aa14.54□□□□□ -0.08
CDK5RAP3-204ENST00000577664 MPRIPQ6WCQ1 1025 aa14.54□□□□□ -0.08
CDK5RAP3-204ENST00000577664 ARHGAP27Q6ZUM4 889 aa14.54□□□□□ -0.08
CDK5RAP3-204ENST00000577664 CFAP44Q96MT7 982 aa14.54□□□□□ -0.08
CDK5RAP3-204ENST00000577664 BCS1LQ9Y276 419 aa14.54□□□□□ -0.08
CDK5RAP3-204ENST00000577664 BRCA1P38398 1863 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 SCN11AQ9UI33 1791 aa14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 MRC1P22897 1456 aa14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 CTCFP49711 727 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 TAF7Q15545 349 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 MCM10Q7L590 875 aa14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 SYTL4Q96C24 671 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 IFT57Q9NWB7 429 aa14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 SLFN5Q08AF3 891 aa14.52□□□□□ -0.09
CDK5RAP3-204ENST00000577664 DCTN1Q14203 1278 aa14.52□□□□□ -0.09
CDK5RAP3-204ENST00000577664 SLC52A2Q9HAB3 445 aa14.52□□□□□ -0.09
CDK5RAP3-204ENST00000577664 ARFGEF1Q9Y6D6 1849 aa14.52□□□□□ -0.09
CDK5RAP3-204ENST00000577664 N4BP2Q86UW6 1770 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-204ENST00000577664 UBR3Q6ZT12 1888 aa14.51□□□□□ -0.09
CDK5RAP3-204ENST00000577664 E9PSI1 815 aa14.51□□□□□ -0.09
CDK5RAP3-204ENST00000577664 GNAI1P63096 354 aa14.51□□□□□ -0.09
CDK5RAP3-204ENST00000577664 SALL2Q9Y467 1007 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-204ENST00000577664 AMIGO3Q86WK7 504 aa14.5□□□□□ -0.09
CDK5RAP3-204ENST00000577664 SPINK5Q9NQ38 1064 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-204ENST00000577664 SIPA1L3O60292 1781 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-204ENST00000577664 C4BP0C0L5 1744 aa14.49□□□□□ -0.09
CDK5RAP3-204ENST00000577664 ZC3H4Q9UPT8 1303 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-204ENST00000577664 TEFQ10587 303 aa14.49□□□□□ -0.09
CDK5RAP3-204ENST00000577664 DUSP27Q5VZP5 1158 aa14.49□□□□□ -0.09
CDK5RAP3-204ENST00000577664 NFATC2IPQ8NCF5 419 aa14.49□□□□□ -0.09
CDK5RAP3-204ENST00000577664 THUMPD2Q9BTF0 503 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-204ENST00000577664 VIRMAQ69YN4 1812 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-204ENST00000577664 MYH16Q9H6N6 1097 aa14.48□□□□□ -0.09
CDK5RAP3-204ENST00000577664 CREBZFQ9NS37 354 aa14.48□□□□□ -0.09
CDK5RAP3-204ENST00000577664 SBF1O95248 1867 aa14.47□□□□□ -0.09
CDK5RAP3-204ENST00000577664 A0A0G2JLW4 131 aa14.47□□□□□ -0.09
CDK5RAP3-204ENST00000577664 CABP4P57796 275 aa14.47□□□□□ -0.09
CDK5RAP3-204ENST00000577664 CDCA7LQ96GN5 454 aa14.47□□□□□ -0.09
CDK5RAP3-204ENST00000577664 HEG1Q9ULI3 1381 aa14.47□□□□□ -0.09
CDK5RAP3-204ENST00000577664 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 BTBD11A6QL63 1104 aa14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 VEGFAP15692 232 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 SSFA2P28290 1259 aa14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 PIGBQ92521 554 aa14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 YTHDC1Q96MU7 727 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 MBIPQ9NS73 344 aa14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 RNF181Q9P0P0 153 aa14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 PDE4DIPQ5VU43 2346 aa14.46□□□□□ -0.1
CDK5RAP3-204ENST00000577664 SOS1Q07889 1333 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-204ENST00000577664 ZNF790Q6PG37 636 aa14.45□□□□□ -0.1
CDK5RAP3-204ENST00000577664 WBP1LQ9NX94 342 aa14.45□□□□□ -0.1
CDK5RAP3-204ENST00000577664 TMOD3Q9NYL9 352 aa14.45□□□□□ -0.1
CDK5RAP3-204ENST00000577664 CNTNAP1P78357 1384 aa14.45□□□□□ -0.1
CDK5RAP3-204ENST00000577664 TNRC18O15417 2968 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 ITGB4P16144 1822 aa14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 CT47B1P0C2W7 299 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 KCNA3P22001 575 aa14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 LBX1P52954 281 aa14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 AIDAQ96BJ3 306 aa14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 AK7Q96M32 723 aa14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 MKRN1Q9UHC7 482 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 DPEP1P16444 411 aa14.43□□□□□ -0.1
CDK5RAP3-204ENST00000577664 EIF4A1P60842 406 aaKnown RBP14.43□□□□□ -0.1
CDK5RAP3-204ENST00000577664 SMIM5Q71RC9 77 aa14.43□□□□□ -0.1
CDK5RAP3-204ENST00000577664 ATG3Q9NT62 314 aa14.43□□□□□ -0.1
CDK5RAP3-204ENST00000577664 TSPYL4Q9UJ04 414 aa14.43□□□□□ -0.1
CDK5RAP3-204ENST00000577664 PALLDQ8WX93 1383 aa14.43□□□□□ -0.1
CDK5RAP3-204ENST00000577664 FANCIQ9NVI1 1328 aa14.42□□□□□ -0.1
CDK5RAP3-204ENST00000577664 KDM3BQ7LBC6 1761 aa14.42□□□□□ -0.1
CDK5RAP3-204ENST00000577664 MMP10P09238 476 aa14.42□□□□□ -0.1
CDK5RAP3-204ENST00000577664 VSIG10Q8N0Z9 540 aa14.42□□□□□ -0.1
CDK5RAP3-204ENST00000577664 ZNF428Q96B54 188 aa14.42□□□□□ -0.1
CDK5RAP3-204ENST00000577664 GLTPD2A6NH11 291 aa14.41□□□□□ -0.1
CDK5RAP3-204ENST00000577664 HOXB7P09629 217 aa14.41□□□□□ -0.1
CDK5RAP3-204ENST00000577664 SMARCC1Q92922 1105 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-204ENST00000577664 MIS18AQ9NYP9 233 aa14.41□□□□□ -0.1
CDK5RAP3-204ENST00000577664 PHF14O94880 888 aa14.4□□□□□ -0.1
CDK5RAP3-204ENST00000577664 HSPA8P11142 646 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-204ENST00000577664 TSR2Q969E8 191 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-204ENST00000577664 ASAP1Q9ULH1 1129 aa14.4□□□□□ -0.1
CDK5RAP3-204ENST00000577664 LAS1LQ9Y4W2 734 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-204ENST00000577664 CCDC85CA6NKD9 419 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms