RNA–Protein interactions for RNA: ENST00000576616.5

SLC12A4-219, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-219ENST00000576616 ZNF330Q9Y3S2 320 aaPredicted RBP13.71□□□□□ -0.21
SLC12A4-219ENST00000576616 CCDC9Q9Y3X0 531 aaKnown RBP13.71□□□□□ -0.21
SLC12A4-219ENST00000576616 PEAK1Q9H792 1746 aa13.71□□□□□ -0.21
SLC12A4-219ENST00000576616 ARHGEF25Q86VW2 580 aa13.71□□□□□ -0.21
SLC12A4-219ENST00000576616 RIMS1Q86UR5 1692 aaKnown RBP13.71□□□□□ -0.22
SLC12A4-219ENST00000576616 MCTP1Q6DN14 999 aa13.71□□□□□ -0.22
SLC12A4-219ENST00000576616 C19orf44Q9H6X5 657 aa13.71□□□□□ -0.22
SLC12A4-219ENST00000576616 DDX49Q9Y6V7 483 aaKnown RBP13.71□□□□□ -0.22
SLC12A4-219ENST00000576616 TATP17735 454 aaPredicted RBP13.7□□□□□ -0.22
SLC12A4-219ENST00000576616 TTC5Q8N0Z6 440 aa13.7□□□□□ -0.22
SLC12A4-219ENST00000576616 JARID2Q92833 1246 aaPredicted RBP13.7□□□□□ -0.22
SLC12A4-219ENST00000576616 FER1L4A9Z1Z3 1794 aa13.7□□□□□ -0.22
SLC12A4-219ENST00000576616 KCNJ4P48050 445 aa13.7□□□□□ -0.22
SLC12A4-219ENST00000576616 PAXIP1Q6ZW49 1069 aaPredicted RBP13.7□□□□□ -0.22
SLC12A4-219ENST00000576616 PROSER3Q2NL68 480 aa13.7□□□□□ -0.22
SLC12A4-219ENST00000576616 RHPN1Q8TCX5 695 aa13.7□□□□□ -0.22
SLC12A4-219ENST00000576616 IFIT2P09913 472 aaKnown RBP13.69□□□□□ -0.22
SLC12A4-219ENST00000576616 PA2G4Q9UQ80 394 aaKnown RBP13.69□□□□□ -0.22
SLC12A4-219ENST00000576616 DDX58O95786 925 aaKnown RBP13.69□□□□□ -0.22
SLC12A4-219ENST00000576616 NFATC2IPQ8NCF5 419 aa13.69□□□□□ -0.22
SLC12A4-219ENST00000576616 CLASRPQ8N2M8 674 aaKnown RBP13.69□□□□□ -0.22
SLC12A4-219ENST00000576616 CWC27Q6UX04 472 aaKnown RBP13.68□□□□□ -0.22
SLC12A4-219ENST00000576616 UNC5CLQ8IV45 518 aa13.68□□□□□ -0.22
SLC12A4-219ENST00000576616 CIZ1Q9ULV3 898 aaPredicted RBP13.68□□□□□ -0.22
SLC12A4-219ENST00000576616 CHMP3Q9Y3E7 222 aa13.68□□□□□ -0.22
SLC12A4-219ENST00000576616 NEXNQ0ZGT2 675 aa13.68□□□□□ -0.22
SLC12A4-219ENST00000576616 ZGPATQ8N5A5 531 aaKnown RBP13.68□□□□□ -0.22
SLC12A4-219ENST00000576616 KIF1BPQ96EK5 621 aa13.68□□□□□ -0.22
SLC12A4-219ENST00000576616 ESYT1Q9BSJ8 1104 aa13.67□□□□□ -0.22
SLC12A4-219ENST00000576616 DIAPH3Q9NSV4 1193 aa13.67□□□□□ -0.22
SLC12A4-219ENST00000576616 BABAM1Q9NWV8 329 aa13.67□□□□□ -0.22
SLC12A4-219ENST00000576616 G3BP1Q13283 466 aaKnown RBP eCLIP13.67□□□□□ -0.22
SLC12A4-219ENST00000576616 LARP6Q9BRS8 491 aaKnown RBP13.67□□□□□ -0.22
SLC12A4-219ENST00000576616 NPHP4O75161 1426 aaPredicted RBP13.67□□□□□ -0.22
SLC12A4-219ENST00000576616 SOS1Q07889 1333 aaPredicted RBP13.67□□□□□ -0.22
SLC12A4-219ENST00000576616 HSP90AB4PQ58FF6 505 aa13.66□□□□□ -0.22
SLC12A4-219ENST00000576616 GIGYF1O75420 1035 aaPredicted RBP13.66□□□□□ -0.22
SLC12A4-219ENST00000576616 CHMLP26374 656 aa13.66□□□□□ -0.22
SLC12A4-219ENST00000576616 BEND3Q5T5X7 828 aa13.66□□□□□ -0.22
SLC12A4-219ENST00000576616 SPG7Q9UQ90 795 aa13.66□□□□□ -0.22
SLC12A4-219ENST00000576616 NUTM2BA6NNL0 878 aaPredicted RBP13.65□□□□□ -0.22
SLC12A4-219ENST00000576616 NUTM2EB1AL46 878 aaPredicted RBP13.65□□□□□ -0.22
SLC12A4-219ENST00000576616 NUCB2P80303 420 aa13.65□□□□□ -0.22
SLC12A4-219ENST00000576616 RAB3GAP1Q15042 981 aa13.65□□□□□ -0.22
SLC12A4-219ENST00000576616 AACSQ86V21 672 aa13.65□□□□□ -0.22
SLC12A4-219ENST00000576616 NUTM2AQ8IVF1 878 aaPredicted RBP13.65□□□□□ -0.22
SLC12A4-219ENST00000576616 CNTROBQ8N137 903 aa13.65□□□□□ -0.22
SLC12A4-219ENST00000576616 RAB11FIP3O75154 756 aa13.65□□□□□ -0.22
SLC12A4-219ENST00000576616 KSR2Q6VAB6 950 aa13.65□□□□□ -0.22
SLC12A4-219ENST00000576616 GPATCH3Q96I76 525 aa13.65□□□□□ -0.22
SLC12A4-219ENST00000576616 ADGRL3Q9HAR2 1447 aa13.65□□□□□ -0.22
SLC12A4-219ENST00000576616 DDX54Q8TDD1 881 aaKnown RBP13.65□□□□□ -0.23
SLC12A4-219ENST00000576616 SSH3Q8TE77 659 aa13.65□□□□□ -0.23
SLC12A4-219ENST00000576616 PKP1Q13835 747 aa13.64□□□□□ -0.23
SLC12A4-219ENST00000576616 PANK2Q9BZ23 570 aa13.64□□□□□ -0.23
SLC12A4-219ENST00000576616 CCDC8Q9H0W5 538 aaPredicted RBP13.64□□□□□ -0.23
SLC12A4-219ENST00000576616 HDAC5Q9UQL6 1122 aa13.64□□□□□ -0.23
SLC12A4-219ENST00000576616 VIRMAQ69YN4 1812 aaKnown RBP13.64□□□□□ -0.23
SLC12A4-219ENST00000576616 IBTKQ9P2D0 1353 aaPredicted RBP13.64□□□□□ -0.23
SLC12A4-219ENST00000576616 TAF7LQ5H9L4 462 aa13.64□□□□□ -0.23
SLC12A4-219ENST00000576616 MYD88Q99836 296 aa13.64□□□□□ -0.23
SLC12A4-219ENST00000576616 STRN4Q9NRL3 753 aa13.64□□□□□ -0.23
SLC12A4-219ENST00000576616 PRPF40AO75400 957 aaKnown RBP13.63□□□□□ -0.23
SLC12A4-219ENST00000576616 CABP4P57796 275 aa13.63□□□□□ -0.23
SLC12A4-219ENST00000576616 COPS6Q7L5N1 327 aa13.63□□□□□ -0.23
SLC12A4-219ENST00000576616 HYPKQ9NX55 129 aa13.63□□□□□ -0.23
SLC12A4-219ENST00000576616 PALD1Q9ULE6 856 aa13.63□□□□□ -0.23
SLC12A4-219ENST00000576616 UBAP1LF5GYI3 381 aa13.63□□□□□ -0.23
SLC12A4-219ENST00000576616 ANP32BQ92688 251 aaKnown RBP13.63□□□□□ -0.23
SLC12A4-219ENST00000576616 PRDM11Q9NQV5 511 aa13.63□□□□□ -0.23
SLC12A4-219ENST00000576616 PIK3C2AO00443 1686 aa13.63□□□□□ -0.23
SLC12A4-219ENST00000576616 SKOR2Q2VWA4 1001 aaPredicted RBP13.63□□□□□ -0.23
SLC12A4-219ENST00000576616 TOM1L2Q6ZVM7 507 aa13.63□□□□□ -0.23
SLC12A4-219ENST00000576616 KLHDC4Q8TBB5 520 aa13.63□□□□□ -0.23
SLC12A4-219ENST00000576616 XAGE3Q8WTP9 111 aa13.63□□□□□ -0.23
SLC12A4-219ENST00000576616 NRKQ7Z2Y5 1582 aa13.63□□□□□ -0.23
SLC12A4-219ENST00000576616 ATP5J2-PTCD1G3V325 749 aa13.62□□□□□ -0.23
SLC12A4-219ENST00000576616 PTCD1O75127 700 aaKnown RBP13.62□□□□□ -0.23
SLC12A4-219ENST00000576616 BAG4O95429 457 aaKnown RBP13.62□□□□□ -0.23
SLC12A4-219ENST00000576616 ZNF790Q6PG37 636 aa13.62□□□□□ -0.23
SLC12A4-219ENST00000576616 OSBPL3Q9H4L5 887 aa13.62□□□□□ -0.23
SLC12A4-219ENST00000576616 XRCC6P12956 609 aaKnown RBP eCLIP13.62□□□□□ -0.23
SLC12A4-219ENST00000576616 CHAMP1Q96JM3 812 aa13.62□□□□□ -0.23
SLC12A4-219ENST00000576616 TMX3Q96JJ7 454 aa13.62□□□□□ -0.23
SLC12A4-219ENST00000576616 DTNBO60941 627 aa13.61□□□□□ -0.23
SLC12A4-219ENST00000576616 HOXB7P09629 217 aa13.61□□□□□ -0.23
SLC12A4-219ENST00000576616 CAVIN1Q6NZI2 390 aaKnown RBP13.61□□□□□ -0.23
SLC12A4-219ENST00000576616 IFNL2Q8IZJ0 200 aa13.61□□□□□ -0.23
SLC12A4-219ENST00000576616 TRIM44Q96DX7 344 aaPredicted RBP13.61□□□□□ -0.23
SLC12A4-219ENST00000576616 GRM8O00222 908 aa13.61□□□□□ -0.23
SLC12A4-219ENST00000576616 ZNF335Q9H4Z2 1342 aaPredicted RBP13.61□□□□□ -0.23
SLC12A4-219ENST00000576616 ERBB3P21860 1342 aa13.61□□□□□ -0.23
SLC12A4-219ENST00000576616 EVA1CP58658 441 aa13.61□□□□□ -0.23
SLC12A4-219ENST00000576616 ZNF496Q96IT1 587 aaPredicted RBP13.61□□□□□ -0.23
SLC12A4-219ENST00000576616 BOLA2Q9H3K6 86 aa13.6□□□□□ -0.23
SLC12A4-219ENST00000576616 TOPAZ1Q8N9V7 1692 aa13.6□□□□□ -0.23
SLC12A4-219ENST00000576616 TMEM94Q12767 1356 aa13.6□□□□□ -0.23
SLC12A4-219ENST00000576616 BICC1Q9H694 974 aaKnown RBP13.6□□□□□ -0.23
SLC12A4-219ENST00000576616 LARP1Q6PKG0 1096 aaKnown RBP13.6□□□□□ -0.23
SLC12A4-219ENST00000576616 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms