RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 OSBPL3Q9H4L5 887 aa29.21■■■□□ 2.27
NPLOC4-217ENST00000574897 SSH3Q8TE77 659 aa29.2■■■□□ 2.27
NPLOC4-217ENST00000574897 MAP3K2Q9Y2U5 619 aa29.2■■■□□ 2.27
NPLOC4-217ENST00000574897 SLC52A2Q9HAB3 445 aa29.2■■■□□ 2.26
NPLOC4-217ENST00000574897 IL1RAPL2Q9NP60 686 aa29.19■■■□□ 2.26
NPLOC4-217ENST00000574897 ZNF335Q9H4Z2 1342 aaPredicted RBP29.19■■■□□ 2.26
NPLOC4-217ENST00000574897 ZNF790Q6PG37 636 aa29.19■■■□□ 2.26
NPLOC4-217ENST00000574897 SNX21Q969T3 373 aa29.19■■■□□ 2.26
NPLOC4-217ENST00000574897 SPG7Q9UQ90 795 aa29.19■■■□□ 2.26
NPLOC4-217ENST00000574897 CHMP4AQ9BY43 222 aa29.18■■■□□ 2.26
NPLOC4-217ENST00000574897 CYP27B1O15528 508 aa29.18■■■□□ 2.26
NPLOC4-217ENST00000574897 PKD1L3Q7Z443 1732 aa29.17■■■□□ 2.26
NPLOC4-217ENST00000574897 KDM4FA0A1W2PPD8 638 aa29.17■■■□□ 2.26
NPLOC4-217ENST00000574897 MX1P20591 662 aa29.17■■■□□ 2.26
NPLOC4-217ENST00000574897 SRGAP3O43295 1099 aa29.16■■■□□ 2.26
NPLOC4-217ENST00000574897 AIMP1Q12904 312 aaKnown RBP29.16■■■□□ 2.26
NPLOC4-217ENST00000574897 POLA2Q14181 598 aa29.16■■■□□ 2.26
NPLOC4-217ENST00000574897 CWF19L2Q2TBE0 894 aaKnown RBP29.16■■■□□ 2.26
NPLOC4-217ENST00000574897 USP26Q9BXU7 913 aa29.16■■■□□ 2.26
NPLOC4-217ENST00000574897 IFNL2Q8IZJ0 200 aa29.16■■■□□ 2.26
NPLOC4-217ENST00000574897 SURF6O75683 361 aaKnown RBP29.15■■■□□ 2.26
NPLOC4-217ENST00000574897 PDIA6Q15084 440 aa29.15■■■□□ 2.26
NPLOC4-217ENST00000574897 KSR2Q6VAB6 950 aa29.15■■■□□ 2.26
NPLOC4-217ENST00000574897 CPDO75976 1380 aa29.14■■■□□ 2.26
NPLOC4-217ENST00000574897 NUTM1Q86Y26 1132 aa29.12■■■□□ 2.25
NPLOC4-217ENST00000574897 ZNF496Q96IT1 587 aaPredicted RBP29.12■■■□□ 2.25
NPLOC4-217ENST00000574897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.12■■■□□ 2.254e-7■■□□□ 13
NPLOC4-217ENST00000574897 ABCC6O95255 1503 aa29.12■■■□□ 2.25
NPLOC4-217ENST00000574897 DDX21Q9NR30 783 aaKnown RBP eCLIP29.12■■■□□ 2.25
NPLOC4-217ENST00000574897 HYPKQ9NX55 129 aa29.12■■■□□ 2.25
NPLOC4-217ENST00000574897 HSP90AB1P08238 724 aaKnown RBP29.11■■■□□ 2.25
NPLOC4-217ENST00000574897 MYL6BP14649 208 aa29.11■■■□□ 2.25
NPLOC4-217ENST00000574897 CASC1Q6TDU7 716 aa29.11■■■□□ 2.25
NPLOC4-217ENST00000574897 SLAIN2Q9P270 581 aa29.1■■■□□ 2.25
NPLOC4-217ENST00000574897 PIP4K2AP48426 406 aaPredicted RBP29.1■■■□□ 2.25
NPLOC4-217ENST00000574897 UNC5CLQ8IV45 518 aa29.1■■■□□ 2.25
NPLOC4-217ENST00000574897 FOXD4L1Q9NU39 408 aa29.1■■■□□ 2.25
NPLOC4-217ENST00000574897 AK9Q5TCS8 1911 aa29.1■■■□□ 2.25
NPLOC4-217ENST00000574897 PRDM11Q9NQV5 511 aa29.09■■■□□ 2.25
NPLOC4-217ENST00000574897 C9orf78Q9NZ63 289 aaPredicted RBP29.09■■■□□ 2.25
NPLOC4-217ENST00000574897 CHMP5Q9NZZ3 219 aa29.09■■■□□ 2.25
NPLOC4-217ENST00000574897 GSE1Q14687 1217 aa29.09■■■□□ 2.25
NPLOC4-217ENST00000574897 RHPN1Q8TCX5 695 aa29.09■■■□□ 2.25
NPLOC4-217ENST00000574897 RILPL2Q969X0 211 aa29.08■■■□□ 2.25
NPLOC4-217ENST00000574897 DCAF5Q96JK2 942 aa29.08■■■□□ 2.25
NPLOC4-217ENST00000574897 STAP2Q9UGK3 403 aa29.08■■■□□ 2.25
NPLOC4-217ENST00000574897 MRC1P22897 1456 aa29.07■■■□□ 2.24
NPLOC4-217ENST00000574897 TRIM6-TRIM34B2RNG4 842 aa29.07■■■□□ 2.24
NPLOC4-217ENST00000574897 DDIT3P35638 169 aa29.06■■■□□ 2.24
NPLOC4-217ENST00000574897 USP16Q9Y5T5 823 aa29.06■■■□□ 2.24
NPLOC4-217ENST00000574897 ABCA3Q99758 1704 aa29.06■■■□□ 2.24
NPLOC4-217ENST00000574897 ERC2O15083 957 aa29.06■■■□□ 2.24
NPLOC4-217ENST00000574897 ALDH1L1O75891 902 aa29.06■■■□□ 2.24
NPLOC4-217ENST00000574897 SOS2Q07890 1332 aaPredicted RBP29.06■■■□□ 2.24
NPLOC4-217ENST00000574897 K7ELQ4 463 aaPredicted RBP29.05■■■□□ 2.24
NPLOC4-217ENST00000574897 RAB11FIP3O75154 756 aa29.05■■■□□ 2.24
NPLOC4-217ENST00000574897 MAP4K4O95819 1239 aaPredicted RBP29.03■■■□□ 2.24
NPLOC4-217ENST00000574897 TOM1L2Q6ZVM7 507 aa29.03■■■□□ 2.24
NPLOC4-217ENST00000574897 XAGE3Q8WTP9 111 aa29.03■■■□□ 2.24
NPLOC4-217ENST00000574897 LINS1Q8NG48 757 aa29.03■■■□□ 2.24
NPLOC4-217ENST00000574897 PA2G4Q9UQ80 394 aaKnown RBP29.03■■■□□ 2.24
NPLOC4-217ENST00000574897 PARP4Q9UKK3 1724 aaKnown RBP29.03■■■□□ 2.24
NPLOC4-217ENST00000574897 REC8O95072 547 aa29.02■■■□□ 2.24
NPLOC4-217ENST00000574897 IGKV5-2P06315 115 aa29.02■■■□□ 2.24
NPLOC4-217ENST00000574897 RIC3Q7Z5B4 369 aa29.02■■■□□ 2.24
NPLOC4-217ENST00000574897 WDR17Q8IZU2 1322 aa29.02■■■□□ 2.24
NPLOC4-217ENST00000574897 TTC5Q8N0Z6 440 aa29.02■■■□□ 2.24
NPLOC4-217ENST00000574897 KAZALD1Q96I82 304 aa29.02■■■□□ 2.24
NPLOC4-217ENST00000574897 DDX58O95786 925 aaKnown RBP29.02■■■□□ 2.24
NPLOC4-217ENST00000574897 COPS6Q7L5N1 327 aa29.02■■■□□ 2.24
NPLOC4-217ENST00000574897 KIF1BPQ96EK5 621 aa29.02■■■□□ 2.24
NPLOC4-217ENST00000574897 SUCLG2Q96I99 432 aa29.02■■■□□ 2.24
NPLOC4-217ENST00000574897 EIF5BO60841 1220 aaKnown RBP29.01■■■□□ 2.23
NPLOC4-217ENST00000574897 CABP4P57796 275 aa29.01■■■□□ 2.23
NPLOC4-217ENST00000574897 RABEP1Q15276 862 aa29.01■■■□□ 2.23
NPLOC4-217ENST00000574897 GLI3P10071 1580 aa29.01■■■□□ 2.23
NPLOC4-217ENST00000574897 COL5A2P05997 1499 aaPredicted RBP29.01■■■□□ 2.23
NPLOC4-217ENST00000574897 MTX1Q13505 466 aa29.01■■■□□ 2.23
NPLOC4-217ENST00000574897 ESYT1Q9BSJ8 1104 aa29.01■■■□□ 2.23
NPLOC4-217ENST00000574897 GRM8O00222 908 aa29■■■□□ 2.23
NPLOC4-217ENST00000574897 CHMLP26374 656 aa29■■■□□ 2.23
NPLOC4-217ENST00000574897 HSP90AA1P07900 732 aaKnown RBP28.99■■■□□ 2.23
NPLOC4-217ENST00000574897 PI4K2BQ8TCG2 481 aa28.99■■■□□ 2.23
NPLOC4-217ENST00000574897 SNRPA1P09661 255 aaKnown RBP28.98■■■□□ 2.23
NPLOC4-217ENST00000574897 OS9Q13438 667 aaPredicted RBP28.98■■■□□ 2.23
NPLOC4-217ENST00000574897 LRP10Q7Z4F1 713 aa28.98■■■□□ 2.23
NPLOC4-217ENST00000574897 IL25Q9H293 177 aa28.98■■■□□ 2.23
NPLOC4-217ENST00000574897 AFDNP55196 1824 aaKnown RBP28.98■■■□□ 2.23
NPLOC4-217ENST00000574897 BICC1Q9H694 974 aaKnown RBP28.97■■■□□ 2.23
NPLOC4-217ENST00000574897 AOX1Q06278 1338 aa28.97■■■□□ 2.23
NPLOC4-217ENST00000574897 MCM4P33991 863 aa28.97■■■□□ 2.23
NPLOC4-217ENST00000574897 FMNL2Q96PY5 1086 aa28.97■■■□□ 2.23
NPLOC4-217ENST00000574897 STRN4Q9NRL3 753 aa28.97■■■□□ 2.23
NPLOC4-217ENST00000574897 MYD88Q99836 296 aa28.96■■■□□ 2.23
NPLOC4-217ENST00000574897 SHANK3Q9BYB0 1731 aa28.96■■■□□ 2.23
NPLOC4-217ENST00000574897 ZCRB1Q8TBF4 217 aaKnown RBP28.95■■■□□ 2.23
NPLOC4-217ENST00000574897 UTYO14607 1347 aa28.95■■■□□ 2.22
NPLOC4-217ENST00000574897 LAMB4A4D0S4 1761 aa28.95■■■□□ 2.22
NPLOC4-217ENST00000574897 PLEKHG2Q9H7P9 1386 aa28.95■■■□□ 2.22
NPLOC4-217ENST00000574897 LARP1Q6PKG0 1096 aaKnown RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms