RNA–Protein interactions for RNA: ENST00000574293.1

GSE1-214, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 3

Gene GSE1, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-214ENST00000574293 CFAP44Q96MT7 982 aa20.37■□□□□ 0.85
GSE1-214ENST00000574293 CICQ96RK0 1608 aaPredicted RBP20.37■□□□□ 0.85
GSE1-214ENST00000574293 NCBP3Q53F19 620 aaKnown RBP20.36■□□□□ 0.85
GSE1-214ENST00000574293 ATF5Q9Y2D1 282 aaPredicted RBP20.36■□□□□ 0.85
GSE1-214ENST00000574293 USP16Q9Y5T5 823 aa20.36■□□□□ 0.85
GSE1-214ENST00000574293 CASZ1Q86V15 1759 aa20.36■□□□□ 0.85
GSE1-214ENST00000574293 GNAI1P63096 354 aa20.35■□□□□ 0.85
GSE1-214ENST00000574293 TRAPPC3LQ5T215 181 aa20.35■□□□□ 0.85
GSE1-214ENST00000574293 ZBTB1Q9Y2K1 713 aa20.35■□□□□ 0.85
GSE1-214ENST00000574293 QSER1Q2KHR3 1735 aa20.35■□□□□ 0.85
GSE1-214ENST00000574293 UBR3Q6ZT12 1888 aa20.35■□□□□ 0.85
GSE1-214ENST00000574293 MYH14Q7Z406 1995 aaKnown RBP20.34■□□□□ 0.85
GSE1-214ENST00000574293 CANXP27824 592 aaKnown RBP20.34■□□□□ 0.85
GSE1-214ENST00000574293 SLC16A10Q8TF71 515 aa20.34■□□□□ 0.85
GSE1-214ENST00000574293 IFT57Q9NWB7 429 aa20.34■□□□□ 0.85
GSE1-214ENST00000574293 GIGYF1O75420 1035 aaPredicted RBP20.33■□□□□ 0.85
GSE1-214ENST00000574293 A1BGP04217 495 aa20.33■□□□□ 0.85
GSE1-214ENST00000574293 ZNF853P0CG23 659 aa20.33■□□□□ 0.85
GSE1-214ENST00000574293 MTFR1LQ9H019 292 aa20.33■□□□□ 0.85
GSE1-214ENST00000574293 SPON1Q9HCB6 807 aa20.33■□□□□ 0.85
GSE1-214ENST00000574293 MBIPQ9NS73 344 aa20.33■□□□□ 0.85
GSE1-214ENST00000574293 NGEFQ8N5V2 710 aa20.32■□□□□ 0.84
GSE1-214ENST00000574293 ARHGEF1Q92888 912 aaKnown RBP20.32■□□□□ 0.84
GSE1-214ENST00000574293 ADRA2BP18089 450 aa20.31■□□□□ 0.84
GSE1-214ENST00000574293 RFC4P35249 363 aa20.31■□□□□ 0.84
GSE1-214ENST00000574293 PIP4K2AP48426 406 aaPredicted RBP20.3■□□□□ 0.84
GSE1-214ENST00000574293 KRT24Q2M2I5 525 aa20.3■□□□□ 0.84
GSE1-214ENST00000574293 ZNF330Q9Y3S2 320 aaPredicted RBP20.3■□□□□ 0.84
GSE1-214ENST00000574293 SOS1Q07889 1333 aaPredicted RBP20.29■□□□□ 0.84
GSE1-214ENST00000574293 MSL1Q68DK7 614 aa20.29■□□□□ 0.84
GSE1-214ENST00000574293 WDR63Q8IWG1 891 aa20.29■□□□□ 0.84
GSE1-214ENST00000574293 EIF2S2P20042 333 aaKnown RBP20.28■□□□□ 0.84
GSE1-214ENST00000574293 TSR2Q969E8 191 aaKnown RBP20.28■□□□□ 0.84
GSE1-214ENST00000574293 IL16Q14005 1332 aa20.27■□□□□ 0.84
GSE1-214ENST00000574293 COL15A1P39059 1388 aa20.27■□□□□ 0.84
GSE1-214ENST00000574293 IL6STP40189 918 aaPredicted RBP20.27■□□□□ 0.84
GSE1-214ENST00000574293 EIF5P55010 431 aaKnown RBP20.27■□□□□ 0.84
GSE1-214ENST00000574293 NPM2Q86SE8 214 aaKnown RBP20.27■□□□□ 0.84
GSE1-214ENST00000574293 PTGER2P43116 358 aa20.26■□□□□ 0.83
GSE1-214ENST00000574293 NECTIN2Q92692 538 aa20.26■□□□□ 0.83
GSE1-214ENST00000574293 ARXQ96QS3 562 aa20.26■□□□□ 0.83
GSE1-214ENST00000574293 SRP68Q9UHB9 627 aaKnown RBP20.26■□□□□ 0.83
GSE1-214ENST00000574293 NBPF26B4DH59 902 aa20.25■□□□□ 0.83
GSE1-214ENST00000574293 ELL2O00472 640 aaPredicted RBP20.25■□□□□ 0.83
GSE1-214ENST00000574293 ZPR1O75312 459 aa20.25■□□□□ 0.83
GSE1-214ENST00000574293 NBPF10Q6P3W6 841 aaKnown RBP20.25■□□□□ 0.83
GSE1-214ENST00000574293 NBPF15Q8N660 670 aa20.25■□□□□ 0.83
GSE1-214ENST00000574293 A0A087WZG4 1122 aa20.24■□□□□ 0.83
GSE1-214ENST00000574293 POLD1P28340 1107 aa20.24■□□□□ 0.83
GSE1-214ENST00000574293 DUSP27Q5VZP5 1158 aa20.24■□□□□ 0.83
GSE1-214ENST00000574293 PPP1R1BQ9UD71 204 aaPredicted RBP20.24■□□□□ 0.83
GSE1-214ENST00000574293 USP42Q9H9J4 1324 aaKnown RBP20.24■□□□□ 0.83
GSE1-214ENST00000574293 LAMB4A4D0S4 1761 aa20.23■□□□□ 0.83
GSE1-214ENST00000574293 GYS1P13807 737 aa20.23■□□□□ 0.83
GSE1-214ENST00000574293 MYL6BP14649 208 aa20.23■□□□□ 0.83
GSE1-214ENST00000574293 USPL1Q5W0Q7 1092 aa20.23■□□□□ 0.83
GSE1-214ENST00000574293 C8orf58Q8NAV2 365 aa20.23■□□□□ 0.83
GSE1-214ENST00000574293 SGIP1Q9BQI5 828 aa20.23■□□□□ 0.83
GSE1-214ENST00000574293 SPINK5Q9NQ38 1064 aaPredicted RBP20.23■□□□□ 0.83
GSE1-214ENST00000574293 NARFQ9UHQ1 456 aa20.23■□□□□ 0.83
GSE1-214ENST00000574293 TBC1D2BQ9UPU7 963 aa20.23■□□□□ 0.83
GSE1-214ENST00000574293 ZNF521Q96K83 1311 aa20.23■□□□□ 0.83
GSE1-214ENST00000574293 NLGN1Q8N2Q7 840 aa20.22■□□□□ 0.83
GSE1-214ENST00000574293 LRP5O75197 1615 aa20.22■□□□□ 0.83
GSE1-214ENST00000574293 C4AP0C0L4 1744 aa20.22■□□□□ 0.83
GSE1-214ENST00000574293 HOXB7P09629 217 aa20.21■□□□□ 0.83
GSE1-214ENST00000574293 HDGFL1Q5TGJ6 251 aa20.21■□□□□ 0.83
GSE1-214ENST00000574293 FANCIQ9NVI1 1328 aa20.21■□□□□ 0.83
GSE1-214ENST00000574293 GOLGA2Q08379 1002 aa20.2■□□□□ 0.82
GSE1-214ENST00000574293 DZIP3Q86Y13 1208 aaKnown RBP20.2■□□□□ 0.82
GSE1-214ENST00000574293 MYH16Q9H6N6 1097 aa20.2■□□□□ 0.82
GSE1-214ENST00000574293 ANXA1P04083 346 aa20.19■□□□□ 0.82
GSE1-214ENST00000574293 FKBP8Q14318 412 aa20.19■□□□□ 0.82
GSE1-214ENST00000574293 TSPYL6Q8N831 410 aa20.19■□□□□ 0.82
GSE1-214ENST00000574293 ERBB4Q15303 1308 aa20.19■□□□□ 0.82
GSE1-214ENST00000574293 PDIA6Q15084 440 aa20.18■□□□□ 0.82
GSE1-214ENST00000574293 PROSER3Q2NL68 480 aa20.18■□□□□ 0.82
GSE1-214ENST00000574293 MMP10P09238 476 aa20.17■□□□□ 0.82
GSE1-214ENST00000574293 HNRNPUQ00839 825 aaKnown RBP eCLIP20.17■□□□□ 0.82
GSE1-214ENST00000574293 EXOSC9Q06265 439 aaKnown RBP20.17■□□□□ 0.82
GSE1-214ENST00000574293 BCL2L12Q9HB09 334 aa20.17■□□□□ 0.82
GSE1-214ENST00000574293 CHPF2Q9P2E5 772 aa20.17■□□□□ 0.82
GSE1-214ENST00000574293 CAMTA2O94983 1202 aa20.16■□□□□ 0.82
GSE1-214ENST00000574293 TWISTNBQ3B726 338 aaPredicted RBP20.16■□□□□ 0.82
GSE1-214ENST00000574293 KLHL34Q8N239 644 aa20.16■□□□□ 0.82
GSE1-214ENST00000574293 COL24A1Q17RW2 1714 aa20.16■□□□□ 0.82
GSE1-214ENST00000574293 TTLL7Q6ZT98 887 aa20.15■□□□□ 0.82
GSE1-214ENST00000574293 DDX21Q9NR30 783 aaKnown RBP eCLIP20.15■□□□□ 0.82
GSE1-214ENST00000574293 DBF4Q9UBU7 674 aaPredicted RBP20.15■□□□□ 0.82
GSE1-214ENST00000574293 E9PSI1 815 aa20.14■□□□□ 0.81
GSE1-214ENST00000574293 AIMP1Q12904 312 aaKnown RBP20.14■□□□□ 0.81
GSE1-214ENST00000574293 KIF6Q6ZMV9 814 aa20.14■□□□□ 0.81
GSE1-214ENST00000574293 BICDL1Q6ZP65 573 aa20.14■□□□□ 0.81
GSE1-214ENST00000574293 CDCA7LQ96GN5 454 aa20.14■□□□□ 0.81
GSE1-214ENST00000574293 PARP3Q9Y6F1 533 aa20.14■□□□□ 0.81
GSE1-214ENST00000574293 TM4SF1P30408 202 aa20.13■□□□□ 0.81
GSE1-214ENST00000574293 SLFN5Q08AF3 891 aa20.13■□□□□ 0.81
GSE1-214ENST00000574293 CCDC30Q5VVM6 783 aa20.13■□□□□ 0.81
GSE1-214ENST00000574293 LRP10Q7Z4F1 713 aa20.13■□□□□ 0.81
GSE1-214ENST00000574293 CHMP4AQ9BY43 222 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms