RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 TM4SF1P30408 202 aa16.75■□□□□ 0.27
PRPF8-208ENST00000573716 DNAJC10Q8IXB1 793 aa16.75■□□□□ 0.27
PRPF8-208ENST00000573716 ZC3H4Q9UPT8 1303 aaKnown RBP16.74■□□□□ 0.27
PRPF8-208ENST00000573716 ADAMTS7Q9UKP4 1686 aa16.74■□□□□ 0.27
PRPF8-208ENST00000573716 C2CD5Q86YS7 1000 aa16.73■□□□□ 0.27
PRPF8-208ENST00000573716 SCN11AQ9UI33 1791 aa16.73■□□□□ 0.27
PRPF8-208ENST00000573716 PCNTO95613 3336 aa16.73■□□□□ 0.27
PRPF8-208ENST00000573716 DLEC1Q9Y238 1755 aa16.72■□□□□ 0.27
PRPF8-208ENST00000573716 NFIXQ14938 502 aa16.72■□□□□ 0.27
PRPF8-208ENST00000573716 TTLL6Q8N841 843 aa16.72■□□□□ 0.27
PRPF8-208ENST00000573716 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
PRPF8-208ENST00000573716 SOS1Q07889 1333 aaPredicted RBP16.71■□□□□ 0.27
PRPF8-208ENST00000573716 SULT6B1Q6IMI4 303 aa16.71■□□□□ 0.27
PRPF8-208ENST00000573716 COL15A1P39059 1388 aa16.7■□□□□ 0.26
PRPF8-208ENST00000573716 H0YIN7 160 aa16.7■□□□□ 0.26
PRPF8-208ENST00000573716 SERPINB2P05120 415 aa16.7■□□□□ 0.26
PRPF8-208ENST00000573716 SLC39A6Q13433 755 aa16.69■□□□□ 0.26
PRPF8-208ENST00000573716 DPY19L2Q6NUT2 758 aa16.69■□□□□ 0.26
PRPF8-208ENST00000573716 BICDL1Q6ZP65 573 aa16.69■□□□□ 0.26
PRPF8-208ENST00000573716 NARFQ9UHQ1 456 aa16.69■□□□□ 0.26
PRPF8-208ENST00000573716 NRXN2Q9P2S2 1712 aa16.68■□□□□ 0.26
PRPF8-208ENST00000573716 NFKBIEO00221 500 aa16.68■□□□□ 0.26
PRPF8-208ENST00000573716 CYP19A1P11511 503 aaPredicted RBP16.68■□□□□ 0.26
PRPF8-208ENST00000573716 MORC1Q86VD1 984 aa16.68■□□□□ 0.26
PRPF8-208ENST00000573716 ZNF622Q969S3 477 aaKnown RBP eCLIP16.68■□□□□ 0.264e-6■□□□□ 8.2
PRPF8-208ENST00000573716 MKRN1Q9UHC7 482 aaKnown RBP16.68■□□□□ 0.26
PRPF8-208ENST00000573716 CARMIL3Q8ND23 1372 aa16.67■□□□□ 0.26
PRPF8-208ENST00000573716 SLC52A2Q9HAB3 445 aa16.67■□□□□ 0.26
PRPF8-208ENST00000573716 ZBTB1Q9Y2K1 713 aa16.67■□□□□ 0.26
PRPF8-208ENST00000573716 VIRMAQ69YN4 1812 aaKnown RBP16.67■□□□□ 0.26
PRPF8-208ENST00000573716 CANXP27824 592 aaKnown RBP16.66■□□□□ 0.26
PRPF8-208ENST00000573716 ERFEQ4G0M1 354 aa16.66■□□□□ 0.26
PRPF8-208ENST00000573716 LGR6Q9HBX8 967 aa16.66■□□□□ 0.26
PRPF8-208ENST00000573716 POTECB2RU33 542 aa16.65■□□□□ 0.26
PRPF8-208ENST00000573716 C21orf2O43822 256 aa16.65■□□□□ 0.26
PRPF8-208ENST00000573716 AKAP4Q5JQC9 854 aa16.65■□□□□ 0.26
PRPF8-208ENST00000573716 PANK3Q9H999 370 aa16.65■□□□□ 0.26
PRPF8-208ENST00000573716 BCL2L12Q9HB09 334 aa16.65■□□□□ 0.26
PRPF8-208ENST00000573716 DICER1Q9UPY3 1922 aaKnown RBP16.64■□□□□ 0.26
PRPF8-208ENST00000573716 CCDC24Q8N4L8 307 aa16.64■□□□□ 0.25
PRPF8-208ENST00000573716 CACNA1SQ13698 1873 aa16.64■□□□□ 0.25
PRPF8-208ENST00000573716 ANKRD31Q8N7Z5 1873 aa16.63■□□□□ 0.25
PRPF8-208ENST00000573716 CHADLQ6NUI6 762 aa16.63■□□□□ 0.25
PRPF8-208ENST00000573716 CREBZFQ9NS37 354 aa16.63■□□□□ 0.25
PRPF8-208ENST00000573716 ZNF330Q9Y3S2 320 aaPredicted RBP16.63■□□□□ 0.25
PRPF8-208ENST00000573716 RNMTO43148 476 aaKnown RBP16.62■□□□□ 0.25
PRPF8-208ENST00000573716 COL11A2P13942 1736 aaPredicted RBP16.62■□□□□ 0.25
PRPF8-208ENST00000573716 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
PRPF8-208ENST00000573716 NPHP1O15259 732 aa16.61■□□□□ 0.25
PRPF8-208ENST00000573716 POTEIP0CG38 1075 aa16.61■□□□□ 0.25
PRPF8-208ENST00000573716 POTEJP0CG39 1038 aa16.61■□□□□ 0.25
PRPF8-208ENST00000573716 IL13P35225 146 aa16.61■□□□□ 0.25
PRPF8-208ENST00000573716 FOXN1O15353 648 aa16.6■□□□□ 0.25
PRPF8-208ENST00000573716 DDNO94850 711 aaPredicted RBP16.6■□□□□ 0.25
PRPF8-208ENST00000573716 HMOX1P09601 288 aa16.6■□□□□ 0.25
PRPF8-208ENST00000573716 PDE6BP35913 854 aa16.6■□□□□ 0.25
PRPF8-208ENST00000573716 TBC1D9BQ66K14 1250 aa16.6■□□□□ 0.25
PRPF8-208ENST00000573716 MRC1P22897 1456 aa16.6■□□□□ 0.25
PRPF8-208ENST00000573716 A0A087WZG4 1122 aa16.59■□□□□ 0.25
PRPF8-208ENST00000573716 STARD3NLO95772 234 aa16.59■□□□□ 0.25
PRPF8-208ENST00000573716 TTC5Q8N0Z6 440 aa16.59■□□□□ 0.25
PRPF8-208ENST00000573716 AIDAQ96BJ3 306 aa16.59■□□□□ 0.25
PRPF8-208ENST00000573716 TAOK3Q9H2K8 898 aa16.59■□□□□ 0.25
PRPF8-208ENST00000573716 BRIP1Q9BX63 1249 aa16.58■□□□□ 0.24
PRPF8-208ENST00000573716 UBR2Q8IWV8 1755 aa16.57■□□□□ 0.24
PRPF8-208ENST00000573716 PRR5LQ6MZQ0 368 aa16.57■□□□□ 0.24
PRPF8-208ENST00000573716 VSIG10Q8N0Z9 540 aa16.57■□□□□ 0.24
PRPF8-208ENST00000573716 TBC1D2BQ9UPU7 963 aa16.57■□□□□ 0.24
PRPF8-208ENST00000573716 SLX4Q8IY92 1834 aa16.56■□□□□ 0.24
PRPF8-208ENST00000573716 SCN7AQ01118 1682 aa16.56■□□□□ 0.24
PRPF8-208ENST00000573716 CNTNAP1P78357 1384 aa16.56■□□□□ 0.24
PRPF8-208ENST00000573716 EIF5P55010 431 aaKnown RBP16.56■□□□□ 0.24
PRPF8-208ENST00000573716 PDZRN3Q9UPQ7 1066 aa16.56■□□□□ 0.24
PRPF8-208ENST00000573716 KNSTRNQ9Y448 316 aa16.56■□□□□ 0.24
PRPF8-208ENST00000573716 CTCFP49711 727 aaPredicted RBP16.55■□□□□ 0.24
PRPF8-208ENST00000573716 MTHFSDQ2M296 383 aaKnown RBP16.55■□□□□ 0.24
PRPF8-208ENST00000573716 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
PRPF8-208ENST00000573716 EAPPQ56P03 285 aaPredicted RBP16.55■□□□□ 0.24
PRPF8-208ENST00000573716 NPM2Q86SE8 214 aaKnown RBP16.55■□□□□ 0.24
PRPF8-208ENST00000573716 CNBD1Q8NA66 436 aa16.55■□□□□ 0.24
PRPF8-208ENST00000573716 CNKSR1Q969H4 720 aa16.55■□□□□ 0.24
PRPF8-208ENST00000573716 LTBP3Q9NS15 1303 aa16.54■□□□□ 0.24
PRPF8-208ENST00000573716 IQCA1LA6NCM1 817 aa16.54■□□□□ 0.24
PRPF8-208ENST00000573716 HSPA5P11021 654 aaKnown RBP16.54■□□□□ 0.24
PRPF8-208ENST00000573716 PRPF40BQ6NWY9 871 aaKnown RBP16.54■□□□□ 0.24
PRPF8-208ENST00000573716 LDHDQ86WU2 507 aa16.54■□□□□ 0.24
PRPF8-208ENST00000573716 SETDB2Q96T68 719 aa16.54■□□□□ 0.24
PRPF8-208ENST00000573716 CLEC11AQ9Y240 323 aa16.54■□□□□ 0.24
PRPF8-208ENST00000573716 VEGFBP49765 207 aa16.53■□□□□ 0.24
PRPF8-208ENST00000573716 EIF4G2P78344 907 aaKnown RBP eCLIP16.53■□□□□ 0.24
PRPF8-208ENST00000573716 ST5P78524 1137 aa16.53■□□□□ 0.24
PRPF8-208ENST00000573716 ZNF496Q96IT1 587 aaPredicted RBP16.53■□□□□ 0.24
PRPF8-208ENST00000573716 PRDM10Q9NQV6 1147 aa16.53■□□□□ 0.24
PRPF8-208ENST00000573716 SCN4AP35499 1836 aa16.52■□□□□ 0.24
PRPF8-208ENST00000573716 TMEM88BA6NKF7 163 aa16.52■□□□□ 0.24
PRPF8-208ENST00000573716 TEFQ10587 303 aa16.52■□□□□ 0.24
PRPF8-208ENST00000573716 SOGA3Q5TF21 947 aa16.52■□□□□ 0.24
PRPF8-208ENST00000573716 STYK1Q6J9G0 422 aa16.52■□□□□ 0.24
PRPF8-208ENST00000573716 TAF1DQ9H5J8 278 aaPredicted RBP16.52■□□□□ 0.24
PRPF8-208ENST00000573716 ARFGEF2Q9Y6D5 1785 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms