RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 SSFA2P28290 1259 aa8.87□□□□□ -0.99
SF3B3-214ENST00000572365 PSME1Q06323 249 aa8.87□□□□□ -0.99
SF3B3-214ENST00000572365 ZNF598Q86UK7 904 aaKnown RBP8.87□□□□□ -0.99
SF3B3-214ENST00000572365 CCDC116Q8IYX3 515 aa8.87□□□□□ -0.99
SF3B3-214ENST00000572365 TMPRSS4Q9NRS4 437 aa8.87□□□□□ -0.99
SF3B3-214ENST00000572365 GNEQ9Y223 722 aaKnown RBP8.87□□□□□ -0.99
SF3B3-214ENST00000572365 RBM19Q9Y4C8 960 aaKnown RBP8.87□□□□□ -0.99
SF3B3-214ENST00000572365 CTTNBP2Q8WZ74 1663 aa8.87□□□□□ -0.99
SF3B3-214ENST00000572365 HECW1Q76N89 1606 aa8.87□□□□□ -0.99
SF3B3-214ENST00000572365 OSBPL3Q9H4L5 887 aa8.86□□□□□ -0.99
SF3B3-214ENST00000572365 SFI1A8K8P3 1242 aa8.85□□□□□ -0.99
SF3B3-214ENST00000572365 M0R2N6 131 aa8.85□□□□□ -0.99
SF3B3-214ENST00000572365 LILRA1O75019 489 aa8.85□□□□□ -0.99
SF3B3-214ENST00000572365 NR3C2P08235 984 aa8.85□□□□□ -0.99
SF3B3-214ENST00000572365 PPP1R26Q5T8A7 1209 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-214ENST00000572365 ZNF697Q5TEC3 545 aa8.85□□□□□ -0.99
SF3B3-214ENST00000572365 FAM9AQ8IZU1 332 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-214ENST00000572365 ZNF784Q8NCA9 323 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-214ENST00000572365 GZF1Q9H116 711 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-214ENST00000572365 CYLDQ9NQC7 956 aa8.85□□□□□ -0.99
SF3B3-214ENST00000572365 PKD2L1Q9P0L9 805 aa8.85□□□□□ -0.99
SF3B3-214ENST00000572365 RGS17Q9UGC6 210 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-214ENST00000572365 V9GY48 417 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-214ENST00000572365 C3P01024 1663 aa8.85□□□□□ -0.99
SF3B3-214ENST00000572365 PLEKHD1A6NEE1 506 aa8.84□□□□□ -0.99
SF3B3-214ENST00000572365 ATP2B4P23634 1241 aa8.84□□□□□ -0.99
SF3B3-214ENST00000572365 FHOD3Q2V2M9 1422 aa8.84□□□□□ -0.99
SF3B3-214ENST00000572365 AFAP1Q8N556 730 aa8.84□□□□□ -0.99
SF3B3-214ENST00000572365 ESF1Q9H501 851 aaKnown RBP8.84□□□□□ -0.99
SF3B3-214ENST00000572365 CCDC9Q9Y3X0 531 aaKnown RBP8.84□□□□□ -0.99
SF3B3-214ENST00000572365 ARHGEF12Q9NZN5 1544 aa8.84□□□□□ -0.99
SF3B3-214ENST00000572365 GOLGA3Q08378 1498 aa8.83□□□□□ -1
SF3B3-214ENST00000572365 SRCAPQ6ZRS2 3230 aa8.83□□□□□ -1
SF3B3-214ENST00000572365 SCAPERQ9BY12 1400 aa8.83□□□□□ -1
SF3B3-214ENST00000572365 WASLO00401 505 aaPredicted RBP8.83□□□□□ -1
SF3B3-214ENST00000572365 MYT1Q01538 1121 aa8.83□□□□□ -1
SF3B3-214ENST00000572365 TXNDC2Q86VQ3 553 aa8.83□□□□□ -1
SF3B3-214ENST00000572365 C1orf216Q8TAB5 229 aa8.83□□□□□ -1
SF3B3-214ENST00000572365 EMILIN1Q9Y6C2 1016 aa8.83□□□□□ -1
SF3B3-214ENST00000572365 IVNS1ABPQ9Y6Y0 642 aa8.83□□□□□ -1
SF3B3-214ENST00000572365 ATP10AO60312 1499 aa8.83□□□□□ -1
SF3B3-214ENST00000572365 TMEM229AB2RXF0 380 aa8.82□□□□□ -1
SF3B3-214ENST00000572365 ALDH1A1P00352 501 aa8.82□□□□□ -1
SF3B3-214ENST00000572365 SCNN1DP51172 638 aa8.82□□□□□ -1
SF3B3-214ENST00000572365 OCLNQ16625 522 aa8.82□□□□□ -1
SF3B3-214ENST00000572365 PRKD2Q9BZL6 878 aa8.82□□□□□ -1
SF3B3-214ENST00000572365 PGPEP1Q9NXJ5 209 aa8.82□□□□□ -1
SF3B3-214ENST00000572365 CAMSAP1Q5T5Y3 1602 aa8.82□□□□□ -1
SF3B3-214ENST00000572365 EFCAB5A4FU69 1503 aa8.81□□□□□ -1
SF3B3-214ENST00000572365 FOXC1Q12948 553 aa8.81□□□□□ -1
SF3B3-214ENST00000572365 SNIP1Q8TAD8 396 aaKnown RBP8.81□□□□□ -1
SF3B3-214ENST00000572365 ZNF358Q9NW07 568 aa8.81□□□□□ -1
SF3B3-214ENST00000572365 NCOA1Q15788 1441 aa8.8□□□□□ -1
SF3B3-214ENST00000572365 ARID4AP29374 1257 aaPredicted RBP8.8□□□□□ -1
SF3B3-214ENST00000572365 ADD1P35611 737 aaKnown RBP8.8□□□□□ -1
SF3B3-214ENST00000572365 CYP2U1Q7Z449 544 aa8.8□□□□□ -1
SF3B3-214ENST00000572365 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.8□□□□□ -1
SF3B3-214ENST00000572365 TSEN2Q8NCE0 465 aaKnown RBP8.8□□□□□ -1
SF3B3-214ENST00000572365 CCER1Q8TC90 406 aaPredicted RBP8.8□□□□□ -1
SF3B3-214ENST00000572365 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.8□□□□□ -1
SF3B3-214ENST00000572365 IQSEC2Q5JU85 1478 aa8.79□□□□□ -1
SF3B3-214ENST00000572365 GDF9O60383 454 aa8.79□□□□□ -1
SF3B3-214ENST00000572365 PRMT3O60678 531 aa8.79□□□□□ -1
SF3B3-214ENST00000572365 TOM1O60784 492 aa8.79□□□□□ -1
SF3B3-214ENST00000572365 GNRH1P01148 92 aa8.79□□□□□ -1
SF3B3-214ENST00000572365 WEE1P30291 646 aa8.79□□□□□ -1
SF3B3-214ENST00000572365 GDF10P55107 478 aa8.79□□□□□ -1
SF3B3-214ENST00000572365 NNTQ13423 1086 aa8.79□□□□□ -1
SF3B3-214ENST00000572365 TMCO4Q5TGY1 634 aa8.79□□□□□ -1
SF3B3-214ENST00000572365 POTEAQ6S8J7 498 aa8.79□□□□□ -1
SF3B3-214ENST00000572365 HINFPQ9BQA5 517 aa8.79□□□□□ -1
SF3B3-214ENST00000572365 CXXC1Q9P0U4 656 aaPredicted RBP8.79□□□□□ -1
SF3B3-214ENST00000572365 SUPT6HQ7KZ85 1726 aaKnown RBP8.79□□□□□ -1
SF3B3-214ENST00000572365 RAPGEF6Q8TEU7 1601 aa8.79□□□□□ -1
SF3B3-214ENST00000572365 INHAP05111 366 aa8.78□□□□□ -1
SF3B3-214ENST00000572365 TAS1R3Q7RTX0 852 aa8.78□□□□□ -1
SF3B3-214ENST00000572365 PRIMPOLQ96LW4 560 aa8.78□□□□□ -1
SF3B3-214ENST00000572365 KLF16Q9BXK1 252 aaPredicted RBP8.78□□□□□ -1
SF3B3-214ENST00000572365 ETNK1Q9HBU6 452 aa8.78□□□□□ -1
SF3B3-214ENST00000572365 WASF2Q9Y6W5 498 aa8.78□□□□□ -1
SF3B3-214ENST00000572365 ZMYM4Q5VZL5 1548 aa8.78□□□□□ -1
SF3B3-214ENST00000572365 C9orf84Q5VXU9 1444 aa8.78□□□□□ -1
SF3B3-214ENST00000572365 BACH1O14867 736 aa8.77□□□□□ -1.01
SF3B3-214ENST00000572365 STAU1O95793 577 aaKnown RBP8.77□□□□□ -1.01
SF3B3-214ENST00000572365 SND1Q7KZF4 910 aaKnown RBP eCLIP8.77□□□□□ -1.01
SF3B3-214ENST00000572365 SLC4A9Q96Q91 983 aa8.77□□□□□ -1.01
SF3B3-214ENST00000572365 TRAPPC8Q9Y2L5 1435 aa8.77□□□□□ -1.01
SF3B3-214ENST00000572365 NUP153P49790 1475 aaKnown RBP8.77□□□□□ -1.01
SF3B3-214ENST00000572365 EPHA4P54764 986 aa8.76□□□□□ -1.01
SF3B3-214ENST00000572365 ESCO1Q5FWF5 840 aa8.76□□□□□ -1.01
SF3B3-214ENST00000572365 TOR4AQ9NXH8 423 aa8.76□□□□□ -1.01
SF3B3-214ENST00000572365 SETD1AO15047 1707 aaKnown RBP8.76□□□□□ -1.01
SF3B3-214ENST00000572365 J3QL48 77 aa8.75□□□□□ -1.01
SF3B3-214ENST00000572365 ADH1AP07327 375 aa8.75□□□□□ -1.01
SF3B3-214ENST00000572365 Q6ZVU0 165 aa8.75□□□□□ -1.01
SF3B3-214ENST00000572365 MAGI2Q86UL8 1455 aa8.75□□□□□ -1.01
SF3B3-214ENST00000572365 TTC24A2A3L6 582 aaPredicted RBP8.74□□□□□ -1.01
SF3B3-214ENST00000572365 LGR5O75473 907 aa8.74□□□□□ -1.01
SF3B3-214ENST00000572365 IGFBP4P22692 258 aa8.74□□□□□ -1.01
SF3B3-214ENST00000572365 PRR20EP86478 221 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms