RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 SSH1Q8WYL5 1049 aa12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 LOC102724428A0A0B4J2F2 783 aa12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 BCAR3O75815 825 aa12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 HOXB7P09629 217 aa12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 CT47B1P0C2W7 299 aaPredicted RBP12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 SIK1P57059 783 aa12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 DNAJC10Q8IXB1 793 aa12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 VSIG10Q8N0Z9 540 aa12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 PROM2Q8N271 834 aa12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 NECTIN2Q92692 538 aa12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 SMARCC1Q92922 1105 aaPredicted RBP12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 RCAN3Q9UKA8 241 aa12.57□□□□□ -0.4
TOM1L1-210ENST00000572158 PDIA6Q15084 440 aa12.56□□□□□ -0.4
TOM1L1-210ENST00000572158 BCL2L13Q9BXK5 485 aa12.56□□□□□ -0.4
TOM1L1-210ENST00000572158 CICQ96RK0 1608 aaPredicted RBP12.56□□□□□ -0.4
TOM1L1-210ENST00000572158 SOS1Q07889 1333 aaPredicted RBP12.55□□□□□ -0.4
TOM1L1-210ENST00000572158 ZNF831Q5JPB2 1677 aa12.55□□□□□ -0.4
TOM1L1-210ENST00000572158 CENPBP07199 599 aaPredicted RBP12.55□□□□□ -0.4
TOM1L1-210ENST00000572158 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
TOM1L1-210ENST00000572158 EIF2S2P20042 333 aaKnown RBP12.55□□□□□ -0.4
TOM1L1-210ENST00000572158 PROSER3Q2NL68 480 aa12.55□□□□□ -0.4
TOM1L1-210ENST00000572158 LRRC4BQ9NT99 713 aa12.55□□□□□ -0.4
TOM1L1-210ENST00000572158 LAMB4A4D0S4 1761 aa12.55□□□□□ -0.4
TOM1L1-210ENST00000572158 NBPF26B4DH59 902 aa12.54□□□□□ -0.4
TOM1L1-210ENST00000572158 APBA3O96018 575 aa12.54□□□□□ -0.4
TOM1L1-210ENST00000572158 CYP19A1P11511 503 aaPredicted RBP12.54□□□□□ -0.4
TOM1L1-210ENST00000572158 ATP6V1AP38606 617 aa12.54□□□□□ -0.4
TOM1L1-210ENST00000572158 PIP4K2AP48426 406 aaPredicted RBP12.54□□□□□ -0.4
TOM1L1-210ENST00000572158 HDGFL1Q5TGJ6 251 aa12.54□□□□□ -0.4
TOM1L1-210ENST00000572158 NBPF14Q5TI25 921 aa12.54□□□□□ -0.4
TOM1L1-210ENST00000572158 NBPF10Q6P3W6 841 aaKnown RBP12.54□□□□□ -0.4
TOM1L1-210ENST00000572158 ILDR2Q71H61 639 aa12.54□□□□□ -0.4
TOM1L1-210ENST00000572158 LRP10Q7Z4F1 713 aa12.54□□□□□ -0.4
TOM1L1-210ENST00000572158 MRPL50Q8N5N7 158 aaKnown RBP12.54□□□□□ -0.4
TOM1L1-210ENST00000572158 NBPF15Q8N660 670 aa12.54□□□□□ -0.4
TOM1L1-210ENST00000572158 PLSCR1O15162 318 aa12.53□□□□□ -0.4
TOM1L1-210ENST00000572158 ANXA1P04083 346 aa12.53□□□□□ -0.4
TOM1L1-210ENST00000572158 A1BGP04217 495 aa12.53□□□□□ -0.4
TOM1L1-210ENST00000572158 G2E3Q7L622 706 aa12.53□□□□□ -0.4
TOM1L1-210ENST00000572158 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
TOM1L1-210ENST00000572158 ZNF428Q96B54 188 aa12.53□□□□□ -0.4
TOM1L1-210ENST00000572158 CHPF2Q9P2E5 772 aa12.53□□□□□ -0.4
TOM1L1-210ENST00000572158 COL5A3P25940 1745 aaPredicted RBP12.53□□□□□ -0.4
TOM1L1-210ENST00000572158 MYH14Q7Z406 1995 aaKnown RBP12.53□□□□□ -0.4
TOM1L1-210ENST00000572158 ALDH1L2Q3SY69 923 aa12.52□□□□□ -0.4
TOM1L1-210ENST00000572158 CCNL1Q9UK58 526 aaPredicted RBP12.52□□□□□ -0.4
TOM1L1-210ENST00000572158 RNF123Q5XPI4 1314 aa12.52□□□□□ -0.41
TOM1L1-210ENST00000572158 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.41
TOM1L1-210ENST00000572158 BRPF1P55201 1214 aaPredicted RBP12.52□□□□□ -0.41
TOM1L1-210ENST00000572158 CCDC30Q5VVM6 783 aa12.52□□□□□ -0.41
TOM1L1-210ENST00000572158 INTS5Q6P9B9 1019 aaKnown RBP12.52□□□□□ -0.41
TOM1L1-210ENST00000572158 CAMKK2Q96RR4 588 aa12.52□□□□□ -0.41
TOM1L1-210ENST00000572158 TEX13AQ9BXU3 409 aaPredicted RBP12.52□□□□□ -0.41
TOM1L1-210ENST00000572158 SUPT16HQ9Y5B9 1047 aaKnown RBP12.52□□□□□ -0.41
TOM1L1-210ENST00000572158 TXNRD1Q16881 649 aa12.51□□□□□ -0.41
TOM1L1-210ENST00000572158 PHAXQ9H814 394 aaKnown RBP12.51□□□□□ -0.41
TOM1L1-210ENST00000572158 SMC4Q9NTJ3 1288 aa12.51□□□□□ -0.41
TOM1L1-210ENST00000572158 RREB1Q92766 1687 aa12.51□□□□□ -0.41
TOM1L1-210ENST00000572158 PLIN1O60240 522 aa12.5□□□□□ -0.41
TOM1L1-210ENST00000572158 CRKLP46109 303 aaKnown RBP12.5□□□□□ -0.41
TOM1L1-210ENST00000572158 EN1Q05925 392 aaPredicted RBP12.5□□□□□ -0.41
TOM1L1-210ENST00000572158 DDX21Q9NR30 783 aaKnown RBP eCLIP12.5□□□□□ -0.41
TOM1L1-210ENST00000572158 DBF4Q9UBU7 674 aaPredicted RBP12.5□□□□□ -0.41
TOM1L1-210ENST00000572158 TNNQ9UQP3 1299 aa12.5□□□□□ -0.41
TOM1L1-210ENST00000572158 ZBTB1Q9Y2K1 713 aa12.5□□□□□ -0.41
TOM1L1-210ENST00000572158 RGPD3A6NKT7 1758 aaPredicted RBP12.5□□□□□ -0.41
TOM1L1-210ENST00000572158 RGPD4Q7Z3J3 1758 aa12.5□□□□□ -0.41
TOM1L1-210ENST00000572158 STARD3NLO95772 234 aa12.49□□□□□ -0.41
TOM1L1-210ENST00000572158 MYL6BP14649 208 aa12.49□□□□□ -0.41
TOM1L1-210ENST00000572158 EZH2Q15910 746 aaKnown RBP12.49□□□□□ -0.41
TOM1L1-210ENST00000572158 SLC27A3Q5K4L6 730 aa12.49□□□□□ -0.41
TOM1L1-210ENST00000572158 SMIM5Q71RC9 77 aa12.49□□□□□ -0.41
TOM1L1-210ENST00000572158 DEFB132Q7Z7B7 95 aa12.49□□□□□ -0.41
TOM1L1-210ENST00000572158 AMIGO3Q86WK7 504 aa12.49□□□□□ -0.41
TOM1L1-210ENST00000572158 NOB1Q9ULX3 412 aaKnown RBP12.49□□□□□ -0.41
TOM1L1-210ENST00000572158 UPF1Q92900 1129 aaKnown RBP eCLIP12.48□□□□□ -0.41
TOM1L1-210ENST00000572158 STK31Q9BXU1 1019 aa12.48□□□□□ -0.41
TOM1L1-210ENST00000572158 CCDC87Q9NVE4 849 aa12.48□□□□□ -0.41
TOM1L1-210ENST00000572158 ERBB4Q15303 1308 aa12.48□□□□□ -0.41
TOM1L1-210ENST00000572158 C4BP0C0L5 1744 aa12.48□□□□□ -0.41
TOM1L1-210ENST00000572158 CANXP27824 592 aaKnown RBP12.47□□□□□ -0.41
TOM1L1-210ENST00000572158 CACNA1FO60840 1977 aa12.47□□□□□ -0.41
TOM1L1-210ENST00000572158 CNTNAP4Q9C0A0 1308 aa12.47□□□□□ -0.41
TOM1L1-210ENST00000572158 EIF5P55010 431 aaKnown RBP12.47□□□□□ -0.41
TOM1L1-210ENST00000572158 RRP1P56182 461 aaKnown RBP12.47□□□□□ -0.41
TOM1L1-210ENST00000572158 FLIIQ13045 1269 aa12.47□□□□□ -0.41
TOM1L1-210ENST00000572158 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
TOM1L1-210ENST00000572158 C20orf194Q5TEA3 1177 aa12.47□□□□□ -0.41
TOM1L1-210ENST00000572158 FRAT1Q92837 279 aaPredicted RBP12.47□□□□□ -0.41
TOM1L1-210ENST00000572158 HYPKQ9NX55 129 aa12.47□□□□□ -0.41
TOM1L1-210ENST00000572158 TRIM27P14373 513 aa12.46□□□□□ -0.42
TOM1L1-210ENST00000572158 TTLL7Q6ZT98 887 aa12.46□□□□□ -0.42
TOM1L1-210ENST00000572158 COPS6Q7L5N1 327 aa12.46□□□□□ -0.42
TOM1L1-210ENST00000572158 CCDC125Q86Z20 511 aa12.46□□□□□ -0.42
TOM1L1-210ENST00000572158 XAGE3Q8WTP9 111 aa12.46□□□□□ -0.42
TOM1L1-210ENST00000572158 CHMP4AQ9BY43 222 aa12.46□□□□□ -0.42
TOM1L1-210ENST00000572158 ADCY9O60503 1353 aa12.45□□□□□ -0.42
TOM1L1-210ENST00000572158 RLBP1P12271 317 aa12.45□□□□□ -0.42
TOM1L1-210ENST00000572158 IL6STP40189 918 aaPredicted RBP12.45□□□□□ -0.42
TOM1L1-210ENST00000572158 AIMP1Q12904 312 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms