RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 RTCBQ9Y3I0 505 aaKnown RBP15.57■□□□□ 0.08
TRIM25-205ENST00000572021 RPS6KA4O75676 772 aa15.56■□□□□ 0.08
TRIM25-205ENST00000572021 A1BGP04217 495 aa15.56■□□□□ 0.08
TRIM25-205ENST00000572021 CANXP27824 592 aaKnown RBP15.56■□□□□ 0.08
TRIM25-205ENST00000572021 STARD3NLO95772 234 aa15.55■□□□□ 0.08
TRIM25-205ENST00000572021 SNRPA1P09661 255 aaKnown RBP15.55■□□□□ 0.08
TRIM25-205ENST00000572021 C4AP0C0L4 1744 aa15.55■□□□□ 0.08
TRIM25-205ENST00000572021 HMGB2P26583 209 aaKnown RBP15.55■□□□□ 0.08
TRIM25-205ENST00000572021 SSFA2P28290 1259 aa15.55■□□□□ 0.08
TRIM25-205ENST00000572021 KRT24Q2M2I5 525 aa15.55■□□□□ 0.08
TRIM25-205ENST00000572021 SPON1Q9HCB6 807 aa15.55■□□□□ 0.08
TRIM25-205ENST00000572021 CHL1O00533 1208 aa15.54■□□□□ 0.08
TRIM25-205ENST00000572021 WWC1Q8IX03 1113 aa15.54■□□□□ 0.08
TRIM25-205ENST00000572021 ARHGEF1Q92888 912 aaKnown RBP15.54■□□□□ 0.08
TRIM25-205ENST00000572021 MTFR1LQ9H019 292 aa15.54■□□□□ 0.08
TRIM25-205ENST00000572021 ZNF330Q9Y3S2 320 aaPredicted RBP15.54■□□□□ 0.08
TRIM25-205ENST00000572021 LRP5O75197 1615 aa15.54■□□□□ 0.08
TRIM25-205ENST00000572021 TRAPPC3LQ5T215 181 aa15.53■□□□□ 0.08
TRIM25-205ENST00000572021 FLAD1Q8NFF5 587 aa15.53■□□□□ 0.08
TRIM25-205ENST00000572021 MBIPQ9NS73 344 aa15.53■□□□□ 0.08
TRIM25-205ENST00000572021 GIGYF1O75420 1035 aaPredicted RBP15.53■□□□□ 0.08
TRIM25-205ENST00000572021 PTGER2P43116 358 aa15.53■□□□□ 0.08
TRIM25-205ENST00000572021 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
TRIM25-205ENST00000572021 TEX13AQ9BXU3 409 aaPredicted RBP15.53■□□□□ 0.08
TRIM25-205ENST00000572021 SRP68Q9UHB9 627 aaKnown RBP15.53■□□□□ 0.08
TRIM25-205ENST00000572021 LAMB4A4D0S4 1761 aa15.53■□□□□ 0.08
TRIM25-205ENST00000572021 SOS1Q07889 1333 aaPredicted RBP15.53■□□□□ 0.08
TRIM25-205ENST00000572021 RFC4P35249 363 aa15.52■□□□□ 0.07
TRIM25-205ENST00000572021 ZNF853P0CG23 659 aa15.51■□□□□ 0.07
TRIM25-205ENST00000572021 CCDC27Q2M243 656 aa15.51■□□□□ 0.07
TRIM25-205ENST00000572021 SLC16A10Q8TF71 515 aa15.51■□□□□ 0.07
TRIM25-205ENST00000572021 NECTIN2Q92692 538 aa15.51■□□□□ 0.07
TRIM25-205ENST00000572021 TSR2Q969E8 191 aaKnown RBP15.51■□□□□ 0.07
TRIM25-205ENST00000572021 BABAM1Q9NWV8 329 aa15.51■□□□□ 0.07
TRIM25-205ENST00000572021 COL15A1P39059 1388 aa15.51■□□□□ 0.07
TRIM25-205ENST00000572021 GNAI1P63096 354 aa15.5■□□□□ 0.07
TRIM25-205ENST00000572021 CALD1Q05682 793 aaKnown RBP15.5■□□□□ 0.07
TRIM25-205ENST00000572021 IFT57Q9NWB7 429 aa15.5■□□□□ 0.07
TRIM25-205ENST00000572021 NBPF26B4DH59 902 aa15.49■□□□□ 0.07
TRIM25-205ENST00000572021 ADRA2BP18089 450 aa15.49■□□□□ 0.07
TRIM25-205ENST00000572021 EIF2S2P20042 333 aaKnown RBP15.49■□□□□ 0.07
TRIM25-205ENST00000572021 NBPF10Q6P3W6 841 aaKnown RBP15.49■□□□□ 0.07
TRIM25-205ENST00000572021 NBPF15Q8N660 670 aa15.49■□□□□ 0.07
TRIM25-205ENST00000572021 ARXQ96QS3 562 aa15.49■□□□□ 0.07
TRIM25-205ENST00000572021 SGIP1Q9BQI5 828 aa15.49■□□□□ 0.07
TRIM25-205ENST00000572021 ELL2O00472 640 aaPredicted RBP15.49■□□□□ 0.07
TRIM25-205ENST00000572021 EIF5P55010 431 aaKnown RBP15.49■□□□□ 0.07
TRIM25-205ENST00000572021 PPP1R1BQ9UD71 204 aaPredicted RBP15.49■□□□□ 0.07
TRIM25-205ENST00000572021 COL24A1Q17RW2 1714 aa15.49■□□□□ 0.07
TRIM25-205ENST00000572021 USPL1Q5W0Q7 1092 aa15.48■□□□□ 0.07
TRIM25-205ENST00000572021 NGEFQ8N5V2 710 aa15.48■□□□□ 0.07
TRIM25-205ENST00000572021 TBC1D2BQ9UPU7 963 aa15.48■□□□□ 0.07
TRIM25-205ENST00000572021 USP42Q9H9J4 1324 aaKnown RBP15.47■□□□□ 0.07
TRIM25-205ENST00000572021 GYS1P13807 737 aa15.47■□□□□ 0.07
TRIM25-205ENST00000572021 MYL6BP14649 208 aa15.47■□□□□ 0.07
TRIM25-205ENST00000572021 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
TRIM25-205ENST00000572021 GTF3C3Q9Y5Q9 886 aa15.47■□□□□ 0.07
TRIM25-205ENST00000572021 ZPR1O75312 459 aa15.46■□□□□ 0.07
TRIM25-205ENST00000572021 ANXA1P04083 346 aa15.46■□□□□ 0.07
TRIM25-205ENST00000572021 POLD1P28340 1107 aa15.46■□□□□ 0.07
TRIM25-205ENST00000572021 IL6STP40189 918 aaPredicted RBP15.46■□□□□ 0.07
TRIM25-205ENST00000572021 FKBP8Q14318 412 aa15.46■□□□□ 0.07
TRIM25-205ENST00000572021 DUSP27Q5VZP5 1158 aa15.46■□□□□ 0.07
TRIM25-205ENST00000572021 C8orf58Q8NAV2 365 aa15.46■□□□□ 0.07
TRIM25-205ENST00000572021 PROSER3Q2NL68 480 aa15.45■□□□□ 0.06
TRIM25-205ENST00000572021 NCBP3Q53F19 620 aaKnown RBP15.45■□□□□ 0.06
TRIM25-205ENST00000572021 WDR63Q8IWG1 891 aa15.45■□□□□ 0.06
TRIM25-205ENST00000572021 KLHL34Q8N239 644 aa15.45■□□□□ 0.06
TRIM25-205ENST00000572021 TSPYL6Q8N831 410 aa15.45■□□□□ 0.06
TRIM25-205ENST00000572021 BCL2L12Q9HB09 334 aa15.45■□□□□ 0.06
TRIM25-205ENST00000572021 NARFQ9UHQ1 456 aa15.45■□□□□ 0.06
TRIM25-205ENST00000572021 IL16Q14005 1332 aa15.44■□□□□ 0.06
TRIM25-205ENST00000572021 MMP10P09238 476 aa15.44■□□□□ 0.06
TRIM25-205ENST00000572021 NPM2Q86SE8 214 aaKnown RBP15.44■□□□□ 0.06
TRIM25-205ENST00000572021 DZIP3Q86Y13 1208 aaKnown RBP15.44■□□□□ 0.06
TRIM25-205ENST00000572021 ZNF521Q96K83 1311 aa15.43■□□□□ 0.06
TRIM25-205ENST00000572021 FANCIQ9NVI1 1328 aa15.43■□□□□ 0.06
TRIM25-205ENST00000572021 SCN7AQ01118 1682 aa15.43■□□□□ 0.06
TRIM25-205ENST00000572021 PDIA6Q15084 440 aa15.43■□□□□ 0.06
TRIM25-205ENST00000572021 HDGFL1Q5TGJ6 251 aa15.43■□□□□ 0.06
TRIM25-205ENST00000572021 FHDC1Q9C0D6 1143 aaPredicted RBP15.43■□□□□ 0.06
TRIM25-205ENST00000572021 A0A087WZG4 1122 aa15.42■□□□□ 0.06
TRIM25-205ENST00000572021 CAMTA2O94983 1202 aa15.42■□□□□ 0.06
TRIM25-205ENST00000572021 NLGN1Q8N2Q7 840 aa15.42■□□□□ 0.06
TRIM25-205ENST00000572021 CHPF2Q9P2E5 772 aa15.42■□□□□ 0.06
TRIM25-205ENST00000572021 BCORQ6W2J9 1755 aa15.42■□□□□ 0.06
TRIM25-205ENST00000572021 BICDL1Q6ZP65 573 aa15.41■□□□□ 0.06
TRIM25-205ENST00000572021 TTLL7Q6ZT98 887 aa15.41■□□□□ 0.06
TRIM25-205ENST00000572021 TCERG1O14776 1098 aaKnown RBP15.41■□□□□ 0.06
TRIM25-205ENST00000572021 DDR1Q08345 913 aa15.41■□□□□ 0.06
TRIM25-205ENST00000572021 EXOSC9Q06265 439 aaKnown RBP15.4■□□□□ 0.06
TRIM25-205ENST00000572021 NFIXQ14938 502 aa15.4■□□□□ 0.06
TRIM25-205ENST00000572021 TBC1D9BQ66K14 1250 aa15.4■□□□□ 0.06
TRIM25-205ENST00000572021 LRP10Q7Z4F1 713 aa15.4■□□□□ 0.06
TRIM25-205ENST00000572021 CDCA7LQ96GN5 454 aa15.4■□□□□ 0.06
TRIM25-205ENST00000572021 HOXB7P09629 217 aa15.39■□□□□ 0.05
TRIM25-205ENST00000572021 AIMP1Q12904 312 aaKnown RBP15.39■□□□□ 0.05
TRIM25-205ENST00000572021 HLFQ16534 295 aa15.39■□□□□ 0.05
TRIM25-205ENST00000572021 ZBTB3Q9H5J0 574 aa15.39■□□□□ 0.05
TRIM25-205ENST00000572021 ERBB4Q15303 1308 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms