RNA–Protein interactions for RNA: ENST00000570215.1

KARS-212, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 994 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-212ENST00000570215 USP42Q9H9J4 1324 aaKnown RBP19.54■□□□□ 0.72
KARS-212ENST00000570215 PRAMEF22A3QJZ6 481 aa19.54■□□□□ 0.72
KARS-212ENST00000570215 CANXP27824 592 aaKnown RBP19.54■□□□□ 0.72
KARS-212ENST00000570215 POTEDQ86YR6 584 aa19.54■□□□□ 0.72
KARS-212ENST00000570215 VSIG10Q8N0Z9 540 aa19.54■□□□□ 0.72
KARS-212ENST00000570215 NLGN1Q8N2Q7 840 aa19.54■□□□□ 0.72
KARS-212ENST00000570215 MIS18AQ9NYP9 233 aa19.54■□□□□ 0.72
KARS-212ENST00000570215 DLG5Q8TDM6 1919 aa19.54■□□□□ 0.72
KARS-212ENST00000570215 HEG1Q9ULI3 1381 aa19.54■□□□□ 0.72
KARS-212ENST00000570215 USPL1Q5W0Q7 1092 aa19.53■□□□□ 0.72
KARS-212ENST00000570215 RTF1Q92541 710 aaKnown RBP19.53■□□□□ 0.72
KARS-212ENST00000570215 THUMPD2Q9BTF0 503 aaKnown RBP19.53■□□□□ 0.72
KARS-212ENST00000570215 DDR1Q08345 913 aa19.52■□□□□ 0.72
KARS-212ENST00000570215 MYBBP1AQ9BQG0 1328 aaKnown RBP19.51■□□□□ 0.71
KARS-212ENST00000570215 A1BGP04217 495 aa19.51■□□□□ 0.71
KARS-212ENST00000570215 COL15A1P39059 1388 aa19.5■□□□□ 0.71
KARS-212ENST00000570215 PIP4K2AP48426 406 aaPredicted RBP19.5■□□□□ 0.71
KARS-212ENST00000570215 FMNL2Q96PY5 1086 aa19.5■□□□□ 0.71
KARS-212ENST00000570215 BCL2L12Q9HB09 334 aa19.5■□□□□ 0.71
KARS-212ENST00000570215 USP16Q9Y5T5 823 aa19.5■□□□□ 0.71
KARS-212ENST00000570215 KIAA1551Q9HCM1 1747 aa19.5■□□□□ 0.71
KARS-212ENST00000570215 HTATSF1O43719 755 aaKnown RBP19.49■□□□□ 0.71
KARS-212ENST00000570215 NFE2L2Q16236 605 aa19.49■□□□□ 0.71
KARS-212ENST00000570215 N4BP2Q86UW6 1770 aaPredicted RBP19.49■□□□□ 0.71
KARS-212ENST00000570215 ZPR1O75312 459 aa19.48■□□□□ 0.71
KARS-212ENST00000570215 STARD3NLO95772 234 aa19.48■□□□□ 0.71
KARS-212ENST00000570215 TM4SF1P30408 202 aa19.48■□□□□ 0.71
KARS-212ENST00000570215 EIF5P55010 431 aaKnown RBP19.48■□□□□ 0.71
KARS-212ENST00000570215 CCDC146Q8IYE0 955 aa19.48■□□□□ 0.71
KARS-212ENST00000570215 PRKRIP1Q9H875 184 aaPredicted RBP19.48■□□□□ 0.71
KARS-212ENST00000570215 PARP3Q9Y6F1 533 aa19.48■□□□□ 0.71
KARS-212ENST00000570215 KIF13BQ9NQT8 1826 aa19.47■□□□□ 0.71
KARS-212ENST00000570215 A0A0G2JLW4 131 aa19.47■□□□□ 0.71
KARS-212ENST00000570215 TAF7Q15545 349 aaPredicted RBP19.47■□□□□ 0.71
KARS-212ENST00000570215 NARFQ9UHQ1 456 aa19.47■□□□□ 0.71
KARS-212ENST00000570215 ZNF330Q9Y3S2 320 aaPredicted RBP19.47■□□□□ 0.71
KARS-212ENST00000570215 C10orf71Q711Q0 1435 aa19.47■□□□□ 0.71
KARS-212ENST00000570215 PXDNLA1KZ92 1463 aa19.47■□□□□ 0.71
KARS-212ENST00000570215 POLRMTO00411 1230 aaKnown RBP19.46■□□□□ 0.71
KARS-212ENST00000570215 ZEB1P37275 1124 aaPredicted RBP19.46■□□□□ 0.71
KARS-212ENST00000570215 TBC1D2BQ9UPU7 963 aa19.46■□□□□ 0.71
KARS-212ENST00000570215 MAPK8IP3Q9UPT6 1336 aa19.46■□□□□ 0.71
KARS-212ENST00000570215 CHD4Q14839 1912 aa19.45■□□□□ 0.7
KARS-212ENST00000570215 NEFMP07197 916 aa19.45■□□□□ 0.7
KARS-212ENST00000570215 NFIXQ14938 502 aa19.45■□□□□ 0.7
KARS-212ENST00000570215 TEX13AQ9BXU3 409 aaPredicted RBP19.45■□□□□ 0.7
KARS-212ENST00000570215 RRP7AQ9Y3A4 280 aaKnown RBP19.45■□□□□ 0.7
KARS-212ENST00000570215 DPEP1P16444 411 aa19.44■□□□□ 0.7
KARS-212ENST00000570215 KCNA3P22001 575 aa19.43■□□□□ 0.7
KARS-212ENST00000570215 RIPK4P57078 832 aa19.43■□□□□ 0.7
KARS-212ENST00000570215 BICDL1Q6ZP65 573 aa19.43■□□□□ 0.7
KARS-212ENST00000570215 ADAMTS8Q9UP79 889 aa19.43■□□□□ 0.7
KARS-212ENST00000570215 SNRPA1P09661 255 aaKnown RBP19.42■□□□□ 0.7
KARS-212ENST00000570215 ZNF784Q8NCA9 323 aaPredicted RBP19.42■□□□□ 0.7
KARS-212ENST00000570215 PNNQ9H307 717 aaKnown RBP19.42■□□□□ 0.7
KARS-212ENST00000570215 KDM3BQ7LBC6 1761 aa19.42■□□□□ 0.7
KARS-212ENST00000570215 NBPF26B4DH59 902 aa19.41■□□□□ 0.7
KARS-212ENST00000570215 GRIN3BO60391 1043 aa19.41■□□□□ 0.7
KARS-212ENST00000570215 IL6STP40189 918 aaPredicted RBP19.41■□□□□ 0.7
KARS-212ENST00000570215 TMPOP42166 694 aaKnown RBP19.41■□□□□ 0.7
KARS-212ENST00000570215 TGFB2P61812 414 aa19.41■□□□□ 0.7
KARS-212ENST00000570215 NEUROD2Q15784 382 aa19.41■□□□□ 0.7
KARS-212ENST00000570215 CCDC184Q52MB2 194 aa19.41■□□□□ 0.7
KARS-212ENST00000570215 NBPF10Q6P3W6 841 aaKnown RBP19.41■□□□□ 0.7
KARS-212ENST00000570215 NBPF15Q8N660 670 aa19.41■□□□□ 0.7
KARS-212ENST00000570215 AFDNP55196 1824 aaKnown RBP19.41■□□□□ 0.7
KARS-212ENST00000570215 CHRNA5P30532 468 aa19.4■□□□□ 0.7
KARS-212ENST00000570215 TBC1D9BQ66K14 1250 aa19.4■□□□□ 0.7
KARS-212ENST00000570215 EIF4A1P60842 406 aaKnown RBP19.39■□□□□ 0.69
KARS-212ENST00000570215 A0A087WZG4 1122 aa19.38■□□□□ 0.69
KARS-212ENST00000570215 CAMTA2O94983 1202 aa19.38■□□□□ 0.69
KARS-212ENST00000570215 SERPINB2P05120 415 aa19.38■□□□□ 0.69
KARS-212ENST00000570215 WDR43Q15061 677 aaKnown RBP eCLIP19.38■□□□□ 0.69
KARS-212ENST00000570215 CCDC24Q8N4L8 307 aa19.38■□□□□ 0.69
KARS-212ENST00000570215 BCS1LQ9Y276 419 aa19.38■□□□□ 0.69
KARS-212ENST00000570215 SCN7AQ01118 1682 aa19.37■□□□□ 0.69
KARS-212ENST00000570215 CARMIL3Q8ND23 1372 aa19.37■□□□□ 0.69
KARS-212ENST00000570215 NRXN2Q9P2S2 1712 aa19.37■□□□□ 0.69
KARS-212ENST00000570215 ZNF316A6NFI3 1004 aaPredicted RBP19.36■□□□□ 0.69
KARS-212ENST00000570215 GIGYF1O75420 1035 aaPredicted RBP19.36■□□□□ 0.69
KARS-212ENST00000570215 DZIP3Q86Y13 1208 aaKnown RBP19.36■□□□□ 0.69
KARS-212ENST00000570215 RUNDC1Q96C34 613 aa19.36■□□□□ 0.69
KARS-212ENST00000570215 TRIM35Q9UPQ4 493 aa19.36■□□□□ 0.69
KARS-212ENST00000570215 BRCA1P38398 1863 aaKnown RBP19.36■□□□□ 0.69
KARS-212ENST00000570215 PNISRQ8TF01 805 aaKnown RBP19.35■□□□□ 0.69
KARS-212ENST00000570215 NGEFQ8N5V2 710 aa19.34■□□□□ 0.69
KARS-212ENST00000570215 TSPYL4Q9UJ04 414 aa19.34■□□□□ 0.69
KARS-212ENST00000570215 BCORQ6W2J9 1755 aa19.34■□□□□ 0.69
KARS-212ENST00000570215 SENP3-EIF4A1A0A087X0R7 540 aa19.33■□□□□ 0.68
KARS-212ENST00000570215 LAMB4A4D0S4 1761 aa19.33■□□□□ 0.68
KARS-212ENST00000570215 KRT24Q2M2I5 525 aa19.32■□□□□ 0.68
KARS-212ENST00000570215 HLFQ16534 295 aa19.31■□□□□ 0.68
KARS-212ENST00000570215 NPM2Q86SE8 214 aaKnown RBP19.31■□□□□ 0.68
KARS-212ENST00000570215 PIM2Q9P1W9 311 aa19.31■□□□□ 0.68
KARS-212ENST00000570215 PRR5LQ6MZQ0 368 aa19.3■□□□□ 0.68
KARS-212ENST00000570215 ARHGAP27Q6ZUM4 889 aa19.3■□□□□ 0.68
KARS-212ENST00000570215 LAS1LQ9Y4W2 734 aaKnown RBP19.3■□□□□ 0.68
KARS-212ENST00000570215 ANKRD31Q8N7Z5 1873 aa19.3■□□□□ 0.68
KARS-212ENST00000570215 APAF1O14727 1248 aa19.29■□□□□ 0.68
KARS-212ENST00000570215 MYL6BP14649 208 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms