RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 SHANK3Q9BYB0 1731 aa10.03□□□□□ -0.8
CNOT1-218ENST00000569732 PCDHGA10Q9Y5H3 936 aa10.03□□□□□ -0.8
CNOT1-218ENST00000569732 MON2Q7Z3U7 1717 aa10.02□□□□□ -0.8
CNOT1-218ENST00000569732 GOLGB1Q14789 3259 aaKnown RBP10.02□□□□□ -0.81
CNOT1-218ENST00000569732 TYW1BQ6NUM6 668 aa10.02□□□□□ -0.81
CNOT1-218ENST00000569732 SLAIN1Q8ND83 568 aa10.02□□□□□ -0.81
CNOT1-218ENST00000569732 USP31Q70CQ4 1352 aa10.01□□□□□ -0.81
CNOT1-218ENST00000569732 KTN1Q86UP2 1357 aaKnown RBP10.01□□□□□ -0.81
CNOT1-218ENST00000569732 FAM117AQ9C073 453 aa10.01□□□□□ -0.81
CNOT1-218ENST00000569732 CDHR5Q9HBB8 845 aa10.01□□□□□ -0.81
CNOT1-218ENST00000569732 NPDC1Q9NQX5 325 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-218ENST00000569732 LRRC4BQ9NT99 713 aa10.01□□□□□ -0.81
CNOT1-218ENST00000569732 LTN1O94822 1766 aa10.01□□□□□ -0.81
CNOT1-218ENST00000569732 ROCK2O75116 1388 aaKnown RBP10.01□□□□□ -0.81
CNOT1-218ENST00000569732 GRIN3BO60391 1043 aa10□□□□□ -0.81
CNOT1-218ENST00000569732 PARP9Q8IXQ6 854 aa10□□□□□ -0.81
CNOT1-218ENST00000569732 NLRP2Q9NX02 1062 aa10□□□□□ -0.81
CNOT1-218ENST00000569732 PNPLA7Q6ZV29 1317 aa10□□□□□ -0.81
CNOT1-218ENST00000569732 FAM208AQ9UK61 1670 aaKnown RBP9.99□□□□□ -0.81
CNOT1-218ENST00000569732 FBXW7Q969H0 707 aa9.99□□□□□ -0.81
CNOT1-218ENST00000569732 DDRGK1Q96HY6 314 aa9.99□□□□□ -0.81
CNOT1-218ENST00000569732 TUBGCP6Q96RT7 1819 aa9.98□□□□□ -0.81
CNOT1-218ENST00000569732 TTLL12Q14166 644 aaPredicted RBP9.98□□□□□ -0.81
CNOT1-218ENST00000569732 TSR1Q2NL82 804 aaKnown RBP9.98□□□□□ -0.81
CNOT1-218ENST00000569732 ANKRD24Q8TF21 1146 aa9.98□□□□□ -0.81
CNOT1-218ENST00000569732 TFCP2L1Q9NZI6 479 aa9.98□□□□□ -0.81
CNOT1-218ENST00000569732 CEP350Q5VT06 3117 aa9.98□□□□□ -0.81
CNOT1-218ENST00000569732 LY75O60449 1722 aa9.98□□□□□ -0.81
CNOT1-218ENST00000569732 NLGN2Q8NFZ4 835 aa9.97□□□□□ -0.81
CNOT1-218ENST00000569732 ANKRD36BQ8N2N9 1353 aa9.97□□□□□ -0.81
CNOT1-218ENST00000569732 SBNO2Q9Y2G9 1366 aa9.97□□□□□ -0.81
CNOT1-218ENST00000569732 DOT1LQ8TEK3 1739 aa9.96□□□□□ -0.81
CNOT1-218ENST00000569732 HMGB2P26583 209 aaKnown RBP9.96□□□□□ -0.82
CNOT1-218ENST00000569732 CARD11Q9BXL7 1154 aa9.96□□□□□ -0.82
CNOT1-218ENST00000569732 FOSBP53539 338 aa9.95□□□□□ -0.82
CNOT1-218ENST00000569732 DOK7Q18PE1 504 aa9.95□□□□□ -0.82
CNOT1-218ENST00000569732 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.95□□□□□ -0.82
CNOT1-218ENST00000569732 EDC4Q6P2E9 1401 aaKnown RBP9.95□□□□□ -0.82
CNOT1-218ENST00000569732 ATP10DQ9P241 1426 aa9.95□□□□□ -0.82
CNOT1-218ENST00000569732 CD163L1Q9NR16 1453 aa9.95□□□□□ -0.82
CNOT1-218ENST00000569732 USP47Q96K76 1375 aa9.94□□□□□ -0.82
CNOT1-218ENST00000569732 YBX3P16989 372 aaKnown RBP eCLIP9.94□□□□□ -0.822e-11■■■□□ 17.8
CNOT1-218ENST00000569732 DDX54Q8TDD1 881 aaKnown RBP9.94□□□□□ -0.82
CNOT1-218ENST00000569732 SYTL4Q96C24 671 aaPredicted RBP9.94□□□□□ -0.82
CNOT1-218ENST00000569732 ADCY9O60503 1353 aa9.93□□□□□ -0.82
CNOT1-218ENST00000569732 NSD2O96028 1365 aa9.93□□□□□ -0.82
CNOT1-218ENST00000569732 RIMBP2O15034 1052 aa9.93□□□□□ -0.82
CNOT1-218ENST00000569732 POTEJP0CG39 1038 aa9.93□□□□□ -0.82
CNOT1-218ENST00000569732 ARSIQ5FYB1 569 aa9.93□□□□□ -0.82
CNOT1-218ENST00000569732 HDGFL2Q7Z4V5 671 aaPredicted RBP9.93□□□□□ -0.82
CNOT1-218ENST00000569732 NME9Q86XW9 330 aa9.93□□□□□ -0.82
CNOT1-218ENST00000569732 IP6K1Q92551 441 aa9.93□□□□□ -0.82
CNOT1-218ENST00000569732 ZDHHC16Q969W1 377 aa9.93□□□□□ -0.82
CNOT1-218ENST00000569732 TESK2Q96S53 571 aa9.93□□□□□ -0.82
CNOT1-218ENST00000569732 CCNL1Q9UK58 526 aaPredicted RBP9.93□□□□□ -0.82
CNOT1-218ENST00000569732 CD2APQ9Y5K6 639 aa9.93□□□□□ -0.82
CNOT1-218ENST00000569732 NUDT7P0C024 238 aa9.92□□□□□ -0.82
CNOT1-218ENST00000569732 HSPA6P17066 643 aa9.92□□□□□ -0.82
CNOT1-218ENST00000569732 C6orf132Q5T0Z8 1188 aa9.92□□□□□ -0.82
CNOT1-218ENST00000569732 GIGYF2Q6Y7W6 1299 aaKnown RBP9.92□□□□□ -0.82
CNOT1-218ENST00000569732 ZNF454Q8N9F8 522 aa9.92□□□□□ -0.82
CNOT1-218ENST00000569732 C5P01031 1676 aa9.91□□□□□ -0.82
CNOT1-218ENST00000569732 HOXB3P14651 431 aaPredicted RBP9.91□□□□□ -0.82
CNOT1-218ENST00000569732 COL23A1Q86Y22 540 aaPredicted RBP9.91□□□□□ -0.82
CNOT1-218ENST00000569732 FLAD1Q8NFF5 587 aa9.91□□□□□ -0.82
CNOT1-218ENST00000569732 KHSRPQ92945 711 aaKnown RBP eCLIP9.91□□□□□ -0.821e-9■■■□□ 14.7
CNOT1-218ENST00000569732 ZSWIM6Q9HCJ5 1215 aa9.91□□□□□ -0.82
CNOT1-218ENST00000569732 TERF2IPQ9NYB0 399 aa9.91□□□□□ -0.82
CNOT1-218ENST00000569732 ST20-MTHFSA0A0A6YYL1 179 aa9.9□□□□□ -0.82
CNOT1-218ENST00000569732 CLCN1P35523 988 aa9.9□□□□□ -0.82
CNOT1-218ENST00000569732 KCNQ4P56696 695 aa9.9□□□□□ -0.82
CNOT1-218ENST00000569732 ZCRB1Q8TBF4 217 aaKnown RBP9.9□□□□□ -0.82
CNOT1-218ENST00000569732 REPIN1Q9BWE0 567 aaKnown RBP9.9□□□□□ -0.82
CNOT1-218ENST00000569732 A0A1W2PP64 1363 aa9.89□□□□□ -0.83
CNOT1-218ENST00000569732 CGNL1Q0VF96 1302 aa9.89□□□□□ -0.83
CNOT1-218ENST00000569732 POTEB2H3BUK9 544 aa9.89□□□□□ -0.83
CNOT1-218ENST00000569732 MS4A1P11836 297 aa9.89□□□□□ -0.83
CNOT1-218ENST00000569732 TMC1Q8TDI8 760 aa9.89□□□□□ -0.83
CNOT1-218ENST00000569732 PUS7Q96PZ0 661 aaKnown RBP9.89□□□□□ -0.83
CNOT1-218ENST00000569732 RTL1A6NKG5 1358 aa9.88□□□□□ -0.83
CNOT1-218ENST00000569732 MEGF6O75095 1541 aa9.88□□□□□ -0.83
CNOT1-218ENST00000569732 OATP04181 439 aa9.88□□□□□ -0.83
CNOT1-218ENST00000569732 HSPA5P11021 654 aaKnown RBP9.88□□□□□ -0.83
CNOT1-218ENST00000569732 HOXC9P31274 260 aa9.88□□□□□ -0.83
CNOT1-218ENST00000569732 ZEB1P37275 1124 aaPredicted RBP9.88□□□□□ -0.83
CNOT1-218ENST00000569732 MDM2Q00987 491 aaPredicted RBP9.88□□□□□ -0.83
CNOT1-218ENST00000569732 GPR153Q6NV75 609 aa9.88□□□□□ -0.83
CNOT1-218ENST00000569732 ZNF710Q8N1W2 664 aa9.88□□□□□ -0.83
CNOT1-218ENST00000569732 PHOX2BQ99453 314 aa9.88□□□□□ -0.83
CNOT1-218ENST00000569732 SLC12A5Q9H2X9 1139 aa9.88□□□□□ -0.83
CNOT1-218ENST00000569732 GPCPD1Q9NPB8 672 aa9.88□□□□□ -0.83
CNOT1-218ENST00000569732 SCUBE2Q9NQ36 999 aa9.88□□□□□ -0.83
CNOT1-218ENST00000569732 NSD3Q9BZ95 1437 aa9.88□□□□□ -0.83
CNOT1-218ENST00000569732 AMPHP49418 695 aa9.87□□□□□ -0.83
CNOT1-218ENST00000569732 MSL1Q68DK7 614 aa9.87□□□□□ -0.83
CNOT1-218ENST00000569732 PADI6Q6TGC4 694 aa9.87□□□□□ -0.83
CNOT1-218ENST00000569732 MAMSTRQ6ZN01 415 aa9.87□□□□□ -0.83
CNOT1-218ENST00000569732 LTV1Q96GA3 475 aaPredicted RBP9.87□□□□□ -0.83
CNOT1-218ENST00000569732 TMUB1Q9BVT8 246 aa9.87□□□□□ -0.83
CNOT1-218ENST00000569732 GOPCQ9HD26 462 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms