RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 MAPK8IP3Q9UPT6 1336 aa26.89■■□□□ 1.89
CLK3-225ENST00000569063 ZPR1O75312 459 aa26.88■■□□□ 1.89
CLK3-225ENST00000569063 FKBP8Q14318 412 aa26.88■■□□□ 1.89
CLK3-225ENST00000569063 PELP1Q8IZL8 1130 aaKnown RBP26.88■■□□□ 1.89
CLK3-225ENST00000569063 PRKRIP1Q9H875 184 aaPredicted RBP26.88■■□□□ 1.89
CLK3-225ENST00000569063 COL15A1P39059 1388 aa26.87■■□□□ 1.89
CLK3-225ENST00000569063 TAF7Q15545 349 aaPredicted RBP26.87■■□□□ 1.89
CLK3-225ENST00000569063 NARFQ9UHQ1 456 aa26.87■■□□□ 1.89
CLK3-225ENST00000569063 PARP3Q9Y6F1 533 aa26.87■■□□□ 1.89
CLK3-225ENST00000569063 YBX3P16989 372 aaKnown RBP eCLIP26.86■■□□□ 1.89
CLK3-225ENST00000569063 CANXP27824 592 aaKnown RBP26.86■■□□□ 1.89
CLK3-225ENST00000569063 DLG5Q8TDM6 1919 aa26.85■■□□□ 1.89
CLK3-225ENST00000569063 EIF5P55010 431 aaKnown RBP26.85■■□□□ 1.89
CLK3-225ENST00000569063 USPL1Q5W0Q7 1092 aa26.85■■□□□ 1.89
CLK3-225ENST00000569063 GOLGB1Q14789 3259 aaKnown RBP26.85■■□□□ 1.89
CLK3-225ENST00000569063 GRIN3BO60391 1043 aa26.83■■□□□ 1.89
CLK3-225ENST00000569063 TM4SF1P30408 202 aa26.83■■□□□ 1.89
CLK3-225ENST00000569063 KIF13BQ9NQT8 1826 aa26.83■■□□□ 1.89
CLK3-225ENST00000569063 C10orf71Q711Q0 1435 aa26.82■■□□□ 1.88
CLK3-225ENST00000569063 TGFB2P61812 414 aa26.82■■□□□ 1.88
CLK3-225ENST00000569063 A0A087WZG4 1122 aa26.81■■□□□ 1.88
CLK3-225ENST00000569063 SNRPA1P09661 255 aaKnown RBP26.81■■□□□ 1.88
CLK3-225ENST00000569063 IL6STP40189 918 aaPredicted RBP26.81■■□□□ 1.88
CLK3-225ENST00000569063 DDR1Q08345 913 aa26.81■■□□□ 1.88
CLK3-225ENST00000569063 PNISRQ8TF01 805 aaKnown RBP26.81■■□□□ 1.88
CLK3-225ENST00000569063 USP16Q9Y5T5 823 aa26.81■■□□□ 1.88
CLK3-225ENST00000569063 A1BGP04217 495 aa26.8■■□□□ 1.88
CLK3-225ENST00000569063 CHD4Q14839 1912 aa26.8■■□□□ 1.88
CLK3-225ENST00000569063 POLRMTO00411 1230 aaKnown RBP26.79■■□□□ 1.88
CLK3-225ENST00000569063 BCL2L12Q9HB09 334 aa26.79■■□□□ 1.88
CLK3-225ENST00000569063 MIS18AQ9NYP9 233 aa26.79■■□□□ 1.88
CLK3-225ENST00000569063 PRAMEF22A3QJZ6 481 aa26.78■■□□□ 1.88
CLK3-225ENST00000569063 PXDNLA1KZ92 1463 aa26.78■■□□□ 1.88
CLK3-225ENST00000569063 RIPK4P57078 832 aa26.77■■□□□ 1.88
CLK3-225ENST00000569063 WDR43Q15061 677 aaKnown RBP eCLIP26.77■■□□□ 1.88
CLK3-225ENST00000569063 THUMPD2Q9BTF0 503 aaKnown RBP26.77■■□□□ 1.88
CLK3-225ENST00000569063 TMPOP42166 694 aaKnown RBP26.76■■□□□ 1.87
CLK3-225ENST00000569063 NFIXQ14938 502 aa26.76■■□□□ 1.87
CLK3-225ENST00000569063 KIAA1551Q9HCM1 1747 aa26.76■■□□□ 1.87
CLK3-225ENST00000569063 A0A0G2JLW4 131 aa26.74■■□□□ 1.87
CLK3-225ENST00000569063 RUNDC1Q96C34 613 aa26.74■■□□□ 1.87
CLK3-225ENST00000569063 ADAMTS8Q9UP79 889 aa26.74■■□□□ 1.87
CLK3-225ENST00000569063 LMOD3Q0VAK6 560 aa26.73■■□□□ 1.87
CLK3-225ENST00000569063 NPM2Q86SE8 214 aaKnown RBP26.73■■□□□ 1.87
CLK3-225ENST00000569063 CCDC146Q8IYE0 955 aa26.73■■□□□ 1.87
CLK3-225ENST00000569063 TBC1D2BQ9UPU7 963 aa26.73■■□□□ 1.87
CLK3-225ENST00000569063 ZNF330Q9Y3S2 320 aaPredicted RBP26.73■■□□□ 1.87
CLK3-225ENST00000569063 KDM3BQ7LBC6 1761 aa26.73■■□□□ 1.87
CLK3-225ENST00000569063 ZNF316A6NFI3 1004 aaPredicted RBP26.72■■□□□ 1.87
CLK3-225ENST00000569063 DPEP1P16444 411 aa26.71■■□□□ 1.87
CLK3-225ENST00000569063 EIF4A1P60842 406 aaKnown RBP26.71■■□□□ 1.87
CLK3-225ENST00000569063 WWC3Q9ULE0 1092 aa26.71■■□□□ 1.87
CLK3-225ENST00000569063 N4BP2Q86UW6 1770 aaPredicted RBP26.71■■□□□ 1.87
CLK3-225ENST00000569063 GIGYF1O75420 1035 aaPredicted RBP26.7■■□□□ 1.86
CLK3-225ENST00000569063 CAMTA2O94983 1202 aa26.69■■□□□ 1.86
CLK3-225ENST00000569063 SERPINB2P05120 415 aa26.69■■□□□ 1.86
CLK3-225ENST00000569063 KCNA3P22001 575 aa26.69■■□□□ 1.86
CLK3-225ENST00000569063 PIP4K2AP48426 406 aaPredicted RBP26.69■■□□□ 1.86
CLK3-225ENST00000569063 ZNF784Q8NCA9 323 aaPredicted RBP26.69■■□□□ 1.86
CLK3-225ENST00000569063 BABAM1Q9NWV8 329 aa26.69■■□□□ 1.86
CLK3-225ENST00000569063 SCN7AQ01118 1682 aa26.69■■□□□ 1.86
CLK3-225ENST00000569063 NRXN2Q9P2S2 1712 aa26.68■■□□□ 1.86
CLK3-225ENST00000569063 NBPF26B4DH59 902 aa26.68■■□□□ 1.86
CLK3-225ENST00000569063 TBC1D9BQ66K14 1250 aa26.68■■□□□ 1.86
CLK3-225ENST00000569063 NBPF10Q6P3W6 841 aaKnown RBP26.68■■□□□ 1.86
CLK3-225ENST00000569063 DZIP3Q86Y13 1208 aaKnown RBP26.68■■□□□ 1.86
CLK3-225ENST00000569063 NBPF15Q8N660 670 aa26.68■■□□□ 1.86
CLK3-225ENST00000569063 RRP7AQ9Y3A4 280 aaKnown RBP26.67■■□□□ 1.86
CLK3-225ENST00000569063 BICDL1Q6ZP65 573 aa26.66■■□□□ 1.86
CLK3-225ENST00000569063 TSPYL4Q9UJ04 414 aa26.66■■□□□ 1.86
CLK3-225ENST00000569063 AFDNP55196 1824 aaKnown RBP26.66■■□□□ 1.86
CLK3-225ENST00000569063 NEUROD2Q15784 382 aa26.65■■□□□ 1.86
CLK3-225ENST00000569063 TRIM35Q9UPQ4 493 aa26.65■■□□□ 1.86
CLK3-225ENST00000569063 LAMB4A4D0S4 1761 aa26.65■■□□□ 1.86
CLK3-225ENST00000569063 PIM2Q9P1W9 311 aa26.64■■□□□ 1.86
CLK3-225ENST00000569063 BCS1LQ9Y276 419 aa26.64■■□□□ 1.86
CLK3-225ENST00000569063 RGL2O15211 777 aa26.63■■□□□ 1.85
CLK3-225ENST00000569063 CLEC4GQ6UXB4 293 aa26.63■■□□□ 1.85
CLK3-225ENST00000569063 BRCA1P38398 1863 aaKnown RBP26.63■■□□□ 1.85
CLK3-225ENST00000569063 CARMIL3Q8ND23 1372 aa26.62■■□□□ 1.85
CLK3-225ENST00000569063 BCORQ6W2J9 1755 aa26.62■■□□□ 1.85
CLK3-225ENST00000569063 CHRNA5P30532 468 aa26.61■■□□□ 1.85
CLK3-225ENST00000569063 SETDB2Q96T68 719 aa26.61■■□□□ 1.85
CLK3-225ENST00000569063 ZNF652Q9Y2D9 606 aa26.6■■□□□ 1.85
CLK3-225ENST00000569063 CHL1O00533 1208 aa26.58■■□□□ 1.85
CLK3-225ENST00000569063 DALRD3Q5D0E6 543 aaKnown RBP26.58■■□□□ 1.85
CLK3-225ENST00000569063 PRR5LQ6MZQ0 368 aa26.57■■□□□ 1.84
CLK3-225ENST00000569063 ERBB4Q15303 1308 aa26.57■■□□□ 1.84
CLK3-225ENST00000569063 CCDC184Q52MB2 194 aa26.56■■□□□ 1.84
CLK3-225ENST00000569063 BRIP1Q9BX63 1249 aa26.56■■□□□ 1.84
CLK3-225ENST00000569063 APAF1O14727 1248 aa26.55■■□□□ 1.84
CLK3-225ENST00000569063 ARFGEF1Q9Y6D6 1849 aa26.54■■□□□ 1.84
CLK3-225ENST00000569063 ARHGAP27Q6ZUM4 889 aa26.54■■□□□ 1.84
CLK3-225ENST00000569063 CNBD1Q8NA66 436 aa26.54■■□□□ 1.84
CLK3-225ENST00000569063 PDZRN3Q9UPQ7 1066 aa26.54■■□□□ 1.84
CLK3-225ENST00000569063 ADCY9O60503 1353 aa26.54■■□□□ 1.84
CLK3-225ENST00000569063 ERVV-1B6SEH8 477 aa26.53■■□□□ 1.84
CLK3-225ENST00000569063 H0YIN7 160 aa26.53■■□□□ 1.84
CLK3-225ENST00000569063 ANP32CO43423 234 aa26.53■■□□□ 1.84
CLK3-225ENST00000569063 PDE6BP35913 854 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms