RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 YBX3P16989 372 aaKnown RBP eCLIP26.74■■□□□ 1.87
ABCA3-206ENST00000569062 FMNL2Q96PY5 1086 aa26.74■■□□□ 1.87
ABCA3-206ENST00000569062 FKBP8Q14318 412 aa26.73■■□□□ 1.87
ABCA3-206ENST00000569062 COL15A1P39059 1388 aa26.72■■□□□ 1.87
ABCA3-206ENST00000569062 STARD3NLO95772 234 aa26.72■■□□□ 1.87
ABCA3-206ENST00000569062 CANXP27824 592 aaKnown RBP26.72■■□□□ 1.87
ABCA3-206ENST00000569062 KIAA1551Q9HCM1 1747 aa26.71■■□□□ 1.87
ABCA3-206ENST00000569062 USPL1Q5W0Q7 1092 aa26.71■■□□□ 1.87
ABCA3-206ENST00000569062 NFE2L2Q16236 605 aa26.7■■□□□ 1.86
ABCA3-206ENST00000569062 TEX13AQ9BXU3 409 aaPredicted RBP26.7■■□□□ 1.86
ABCA3-206ENST00000569062 PNNQ9H307 717 aaKnown RBP26.7■■□□□ 1.86
ABCA3-206ENST00000569062 PARP3Q9Y6F1 533 aa26.7■■□□□ 1.86
ABCA3-206ENST00000569062 N4BP2Q86UW6 1770 aaPredicted RBP26.7■■□□□ 1.86
ABCA3-206ENST00000569062 MAPK8IP3Q9UPT6 1336 aa26.69■■□□□ 1.86
ABCA3-206ENST00000569062 ZPR1O75312 459 aa26.69■■□□□ 1.86
ABCA3-206ENST00000569062 NARFQ9UHQ1 456 aa26.68■■□□□ 1.86
ABCA3-206ENST00000569062 WWC3Q9ULE0 1092 aa26.68■■□□□ 1.86
ABCA3-206ENST00000569062 C10orf71Q711Q0 1435 aa26.67■■□□□ 1.86
ABCA3-206ENST00000569062 DDR1Q08345 913 aa26.67■■□□□ 1.86
ABCA3-206ENST00000569062 TAF7Q15545 349 aaPredicted RBP26.67■■□□□ 1.86
ABCA3-206ENST00000569062 PRKRIP1Q9H875 184 aaPredicted RBP26.67■■□□□ 1.86
ABCA3-206ENST00000569062 PRAMEF22A3QJZ6 481 aa26.66■■□□□ 1.86
ABCA3-206ENST00000569062 EIF5P55010 431 aaKnown RBP26.66■■□□□ 1.86
ABCA3-206ENST00000569062 MIS18AQ9NYP9 233 aa26.66■■□□□ 1.86
ABCA3-206ENST00000569062 KDM3BQ7LBC6 1761 aa26.66■■□□□ 1.86
ABCA3-206ENST00000569062 A1BGP04217 495 aa26.65■■□□□ 1.86
ABCA3-206ENST00000569062 TM4SF1P30408 202 aa26.65■■□□□ 1.86
ABCA3-206ENST00000569062 THUMPD2Q9BTF0 503 aaKnown RBP26.65■■□□□ 1.86
ABCA3-206ENST00000569062 BCL2L12Q9HB09 334 aa26.65■■□□□ 1.86
ABCA3-206ENST00000569062 USP16Q9Y5T5 823 aa26.65■■□□□ 1.86
ABCA3-206ENST00000569062 PXDNLA1KZ92 1463 aa26.65■■□□□ 1.86
ABCA3-206ENST00000569062 GRIN3BO60391 1043 aa26.64■■□□□ 1.86
ABCA3-206ENST00000569062 AFDNP55196 1824 aaKnown RBP26.63■■□□□ 1.85
ABCA3-206ENST00000569062 ZNF330Q9Y3S2 320 aaPredicted RBP26.63■■□□□ 1.85
ABCA3-206ENST00000569062 POLRMTO00411 1230 aaKnown RBP26.62■■□□□ 1.85
ABCA3-206ENST00000569062 SCN7AQ01118 1682 aa26.61■■□□□ 1.85
ABCA3-206ENST00000569062 SNRPA1P09661 255 aaKnown RBP26.61■■□□□ 1.85
ABCA3-206ENST00000569062 IL6STP40189 918 aaPredicted RBP26.61■■□□□ 1.85
ABCA3-206ENST00000569062 TGFB2P61812 414 aa26.61■■□□□ 1.85
ABCA3-206ENST00000569062 A0A0G2JLW4 131 aa26.6■■□□□ 1.85
ABCA3-206ENST00000569062 PIP4K2AP48426 406 aaPredicted RBP26.6■■□□□ 1.85
ABCA3-206ENST00000569062 NFIXQ14938 502 aa26.6■■□□□ 1.85
ABCA3-206ENST00000569062 CCDC146Q8IYE0 955 aa26.6■■□□□ 1.85
ABCA3-206ENST00000569062 BRCA1P38398 1863 aaKnown RBP26.59■■□□□ 1.85
ABCA3-206ENST00000569062 A0A087WZG4 1122 aa26.59■■□□□ 1.85
ABCA3-206ENST00000569062 RIPK4P57078 832 aa26.59■■□□□ 1.85
ABCA3-206ENST00000569062 TBC1D2BQ9UPU7 963 aa26.59■■□□□ 1.85
ABCA3-206ENST00000569062 NRXN2Q9P2S2 1712 aa26.59■■□□□ 1.85
ABCA3-206ENST00000569062 LAMB4A4D0S4 1761 aa26.58■■□□□ 1.85
ABCA3-206ENST00000569062 TMPOP42166 694 aaKnown RBP26.58■■□□□ 1.85
ABCA3-206ENST00000569062 WDR43Q15061 677 aaKnown RBP eCLIP26.58■■□□□ 1.85
ABCA3-206ENST00000569062 DPEP1P16444 411 aa26.57■■□□□ 1.84
ABCA3-206ENST00000569062 PNISRQ8TF01 805 aaKnown RBP26.57■■□□□ 1.84
ABCA3-206ENST00000569062 BCORQ6W2J9 1755 aa26.56■■□□□ 1.84
ABCA3-206ENST00000569062 ZNF784Q8NCA9 323 aaPredicted RBP26.56■■□□□ 1.84
ABCA3-206ENST00000569062 ADAMTS8Q9UP79 889 aa26.56■■□□□ 1.84
ABCA3-206ENST00000569062 RRP7AQ9Y3A4 280 aaKnown RBP26.55■■□□□ 1.84
ABCA3-206ENST00000569062 KCNA3P22001 575 aa26.54■■□□□ 1.84
ABCA3-206ENST00000569062 BICDL1Q6ZP65 573 aa26.54■■□□□ 1.84
ABCA3-206ENST00000569062 SERPINB2P05120 415 aa26.53■■□□□ 1.84
ABCA3-206ENST00000569062 EIF4A1P60842 406 aaKnown RBP26.53■■□□□ 1.84
ABCA3-206ENST00000569062 TBC1D9BQ66K14 1250 aa26.53■■□□□ 1.84
ABCA3-206ENST00000569062 NPM2Q86SE8 214 aaKnown RBP26.53■■□□□ 1.84
ABCA3-206ENST00000569062 RUNDC1Q96C34 613 aa26.53■■□□□ 1.84
ABCA3-206ENST00000569062 ZNF316A6NFI3 1004 aaPredicted RBP26.52■■□□□ 1.84
ABCA3-206ENST00000569062 NBPF26B4DH59 902 aa26.52■■□□□ 1.84
ABCA3-206ENST00000569062 NEUROD2Q15784 382 aa26.52■■□□□ 1.84
ABCA3-206ENST00000569062 NBPF10Q6P3W6 841 aaKnown RBP26.52■■□□□ 1.84
ABCA3-206ENST00000569062 DZIP3Q86Y13 1208 aaKnown RBP26.52■■□□□ 1.84
ABCA3-206ENST00000569062 NBPF15Q8N660 670 aa26.52■■□□□ 1.84
ABCA3-206ENST00000569062 BCS1LQ9Y276 419 aa26.52■■□□□ 1.84
ABCA3-206ENST00000569062 GIGYF1O75420 1035 aaPredicted RBP26.51■■□□□ 1.83
ABCA3-206ENST00000569062 CAMTA2O94983 1202 aa26.51■■□□□ 1.83
ABCA3-206ENST00000569062 CHRNA5P30532 468 aa26.5■■□□□ 1.83
ABCA3-206ENST00000569062 LMOD3Q0VAK6 560 aa26.49■■□□□ 1.83
ABCA3-206ENST00000569062 TSPYL4Q9UJ04 414 aa26.49■■□□□ 1.83
ABCA3-206ENST00000569062 ARFGEF1Q9Y6D6 1849 aa26.49■■□□□ 1.83
ABCA3-206ENST00000569062 CARMIL3Q8ND23 1372 aa26.47■■□□□ 1.83
ABCA3-206ENST00000569062 PIM2Q9P1W9 311 aa26.46■■□□□ 1.83
ABCA3-206ENST00000569062 TRIM35Q9UPQ4 493 aa26.46■■□□□ 1.83
ABCA3-206ENST00000569062 ANKRD31Q8N7Z5 1873 aa26.46■■□□□ 1.83
ABCA3-206ENST00000569062 DLEC1Q9Y238 1755 aa26.46■■□□□ 1.83
ABCA3-206ENST00000569062 CCDC184Q52MB2 194 aa26.44■■□□□ 1.82
ABCA3-206ENST00000569062 SETDB2Q96T68 719 aa26.43■■□□□ 1.82
ABCA3-206ENST00000569062 CCDC24Q8N4L8 307 aa26.42■■□□□ 1.82
ABCA3-206ENST00000569062 BABAM1Q9NWV8 329 aa26.42■■□□□ 1.82
ABCA3-206ENST00000569062 DALRD3Q5D0E6 543 aaKnown RBP26.41■■□□□ 1.82
ABCA3-206ENST00000569062 PRR5LQ6MZQ0 368 aa26.41■■□□□ 1.82
ABCA3-206ENST00000569062 CLEC4GQ6UXB4 293 aa26.41■■□□□ 1.82
ABCA3-206ENST00000569062 NGEFQ8N5V2 710 aa26.41■■□□□ 1.82
ABCA3-206ENST00000569062 ARHGAP27Q6ZUM4 889 aa26.4■■□□□ 1.82
ABCA3-206ENST00000569062 ADCY9O60503 1353 aa26.39■■□□□ 1.82
ABCA3-206ENST00000569062 MYL6BP14649 208 aa26.39■■□□□ 1.82
ABCA3-206ENST00000569062 ZNF652Q9Y2D9 606 aa26.39■■□□□ 1.82
ABCA3-206ENST00000569062 ATP10DQ9P241 1426 aa26.39■■□□□ 1.81
ABCA3-206ENST00000569062 NUP98P52948 1817 aa26.38■■□□□ 1.81
ABCA3-206ENST00000569062 HLFQ16534 295 aa26.38■■□□□ 1.81
ABCA3-206ENST00000569062 C2CD5Q86YS7 1000 aa26.38■■□□□ 1.81
ABCA3-206ENST00000569062 LAS1LQ9Y4W2 734 aaKnown RBP26.38■■□□□ 1.81
ABCA3-206ENST00000569062 COL11A2P13942 1736 aaPredicted RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms