RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 NFIXQ14938 502 aa17.1■□□□□ 0.33
SNX29-207ENST00000568949 DNAJC10Q8IXB1 793 aa17.1■□□□□ 0.33
SNX29-207ENST00000568949 NARFQ9UHQ1 456 aa17.1■□□□□ 0.33
SNX29-207ENST00000568949 SULT6B1Q6IMI4 303 aa17.09■□□□□ 0.33
SNX29-207ENST00000568949 TTLL6Q8N841 843 aa17.09■□□□□ 0.33
SNX29-207ENST00000568949 POLR3GLQ9BT43 218 aa17.09■□□□□ 0.33
SNX29-207ENST00000568949 TIMELESSQ9UNS1 1208 aa17.09■□□□□ 0.33
SNX29-207ENST00000568949 CCDC88AQ3V6T2 1871 aa17.08■□□□□ 0.33
SNX29-207ENST00000568949 HSPA1AP0DMV8 641 aaKnown RBP17.08■□□□□ 0.32
SNX29-207ENST00000568949 HSPA1BP0DMV9 641 aaKnown RBP17.08■□□□□ 0.32
SNX29-207ENST00000568949 CYP19A1P11511 503 aaPredicted RBP17.08■□□□□ 0.32
SNX29-207ENST00000568949 AKAP4Q5JQC9 854 aa17.08■□□□□ 0.32
SNX29-207ENST00000568949 SLC52A2Q9HAB3 445 aa17.08■□□□□ 0.32
SNX29-207ENST00000568949 SERPINB2P05120 415 aa17.07■□□□□ 0.32
SNX29-207ENST00000568949 PANK3Q9H999 370 aa17.07■□□□□ 0.32
SNX29-207ENST00000568949 COL15A1P39059 1388 aa17.06■□□□□ 0.32
SNX29-207ENST00000568949 TIAM2Q8IVF5 1701 aa17.06■□□□□ 0.32
SNX29-207ENST00000568949 H0YIN7 160 aa17.05■□□□□ 0.32
SNX29-207ENST00000568949 NFKBIEO00221 500 aa17.05■□□□□ 0.32
SNX29-207ENST00000568949 IL13P35225 146 aa17.05■□□□□ 0.32
SNX29-207ENST00000568949 MORC1Q86VD1 984 aa17.05■□□□□ 0.32
SNX29-207ENST00000568949 C2CD5Q86YS7 1000 aa17.05■□□□□ 0.32
SNX29-207ENST00000568949 BCL2L12Q9HB09 334 aa17.05■□□□□ 0.32
SNX29-207ENST00000568949 MRC1P22897 1456 aa17.05■□□□□ 0.32
SNX29-207ENST00000568949 DPY19L2Q6NUT2 758 aa17.04■□□□□ 0.32
SNX29-207ENST00000568949 VSIG10Q8N0Z9 540 aa17.04■□□□□ 0.32
SNX29-207ENST00000568949 ZBTB1Q9Y2K1 713 aa17.04■□□□□ 0.32
SNX29-207ENST00000568949 POTECB2RU33 542 aa17.03■□□□□ 0.32
SNX29-207ENST00000568949 RNMTO43148 476 aaKnown RBP17.03■□□□□ 0.32
SNX29-207ENST00000568949 LGR6Q9HBX8 967 aa17.03■□□□□ 0.32
SNX29-207ENST00000568949 PDZRN3Q9UPQ7 1066 aa17.03■□□□□ 0.32
SNX29-207ENST00000568949 SLC39A6Q13433 755 aa17.02■□□□□ 0.32
SNX29-207ENST00000568949 DICER1Q9UPY3 1922 aaKnown RBP17.02■□□□□ 0.31
SNX29-207ENST00000568949 VIRMAQ69YN4 1812 aaKnown RBP17.01■□□□□ 0.31
SNX29-207ENST00000568949 CARMIL3Q8ND23 1372 aa17.01■□□□□ 0.31
SNX29-207ENST00000568949 A0A087WZG4 1122 aa17■□□□□ 0.31
SNX29-207ENST00000568949 PCNTO95613 3336 aa17■□□□□ 0.31
SNX29-207ENST00000568949 EIF5P55010 431 aaKnown RBP16.99■□□□□ 0.31
SNX29-207ENST00000568949 ERFEQ4G0M1 354 aa16.99■□□□□ 0.31
SNX29-207ENST00000568949 BRIP1Q9BX63 1249 aa16.99■□□□□ 0.31
SNX29-207ENST00000568949 CREBZFQ9NS37 354 aa16.99■□□□□ 0.31
SNX29-207ENST00000568949 FER1L6Q2WGJ9 1857 aa16.99■□□□□ 0.31
SNX29-207ENST00000568949 LTBP3Q9NS15 1303 aa16.98■□□□□ 0.31
SNX29-207ENST00000568949 STARD3NLO95772 234 aa16.98■□□□□ 0.31
SNX29-207ENST00000568949 CANXP27824 592 aaKnown RBP16.98■□□□□ 0.31
SNX29-207ENST00000568949 PDE6BP35913 854 aa16.98■□□□□ 0.31
SNX29-207ENST00000568949 CHADLQ6NUI6 762 aa16.98■□□□□ 0.31
SNX29-207ENST00000568949 ZNF622Q969S3 477 aaKnown RBP eCLIP16.98■□□□□ 0.313e-7■■■■■ 28.4
SNX29-207ENST00000568949 ANKRD31Q8N7Z5 1873 aa16.98■□□□□ 0.31
SNX29-207ENST00000568949 UBR2Q8IWV8 1755 aa16.97■□□□□ 0.31
SNX29-207ENST00000568949 C21orf2O43822 256 aa16.97■□□□□ 0.31
SNX29-207ENST00000568949 EIF4G2P78344 907 aaKnown RBP eCLIP16.97■□□□□ 0.31
SNX29-207ENST00000568949 BICDL1Q6ZP65 573 aa16.97■□□□□ 0.31
SNX29-207ENST00000568949 KNSTRNQ9Y448 316 aa16.97■□□□□ 0.31
SNX29-207ENST00000568949 TBC1D9BQ66K14 1250 aa16.96■□□□□ 0.31
SNX29-207ENST00000568949 MTHFSDQ2M296 383 aaKnown RBP16.95■□□□□ 0.3
SNX29-207ENST00000568949 TAOK3Q9H2K8 898 aa16.95■□□□□ 0.3
SNX29-207ENST00000568949 HMOX1P09601 288 aa16.94■□□□□ 0.3
SNX29-207ENST00000568949 HSPA5P11021 654 aaKnown RBP16.94■□□□□ 0.3
SNX29-207ENST00000568949 PRR5LQ6MZQ0 368 aa16.94■□□□□ 0.3
SNX29-207ENST00000568949 TTC5Q8N0Z6 440 aa16.94■□□□□ 0.3
SNX29-207ENST00000568949 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
SNX29-207ENST00000568949 MKRN1Q9UHC7 482 aaKnown RBP16.94■□□□□ 0.3
SNX29-207ENST00000568949 COL11A2P13942 1736 aaPredicted RBP16.93■□□□□ 0.3
SNX29-207ENST00000568949 SOGA3Q5TF21 947 aa16.93■□□□□ 0.3
SNX29-207ENST00000568949 CNKSR1Q969H4 720 aa16.93■□□□□ 0.3
SNX29-207ENST00000568949 ZNF219Q9P2Y4 722 aaPredicted RBP16.93■□□□□ 0.3
SNX29-207ENST00000568949 SCN7AQ01118 1682 aa16.93■□□□□ 0.3
SNX29-207ENST00000568949 CLSPNQ9HAW4 1339 aa16.93■□□□□ 0.3
SNX29-207ENST00000568949 DDNO94850 711 aaPredicted RBP16.92■□□□□ 0.3
SNX29-207ENST00000568949 IL6STP40189 918 aaPredicted RBP16.92■□□□□ 0.3
SNX29-207ENST00000568949 STYK1Q6J9G0 422 aa16.92■□□□□ 0.3
SNX29-207ENST00000568949 PRDM10Q9NQV6 1147 aa16.92■□□□□ 0.3
SNX29-207ENST00000568949 CNTNAP1P78357 1384 aa16.91■□□□□ 0.3
SNX29-207ENST00000568949 IQCA1LA6NCM1 817 aa16.91■□□□□ 0.3
SNX29-207ENST00000568949 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
SNX29-207ENST00000568949 TBC1D2BQ9UPU7 963 aa16.91■□□□□ 0.3
SNX29-207ENST00000568949 PASKQ96RG2 1323 aa16.91■□□□□ 0.3
SNX29-207ENST00000568949 SLX4Q8IY92 1834 aa16.91■□□□□ 0.3
SNX29-207ENST00000568949 HEG1Q9ULI3 1381 aa16.9■□□□□ 0.3
SNX29-207ENST00000568949 FOXN1O15353 648 aa16.9■□□□□ 0.3
SNX29-207ENST00000568949 POTEIP0CG38 1075 aa16.9■□□□□ 0.3
SNX29-207ENST00000568949 POTEJP0CG39 1038 aa16.9■□□□□ 0.3
SNX29-207ENST00000568949 SRGNP10124 158 aa16.9■□□□□ 0.3
SNX29-207ENST00000568949 TRIM26Q12899 539 aaPredicted RBP16.9■□□□□ 0.3
SNX29-207ENST00000568949 LDHDQ86WU2 507 aa16.9■□□□□ 0.3
SNX29-207ENST00000568949 CCDC24Q8N4L8 307 aa16.9■□□□□ 0.3
SNX29-207ENST00000568949 CNBD1Q8NA66 436 aa16.9■□□□□ 0.3
SNX29-207ENST00000568949 ZNF496Q96IT1 587 aaPredicted RBP16.9■□□□□ 0.3
SNX29-207ENST00000568949 L3MBTL3Q96JM7 780 aaPredicted RBP16.9■□□□□ 0.3
SNX29-207ENST00000568949 SETDB2Q96T68 719 aa16.9■□□□□ 0.3
SNX29-207ENST00000568949 SCN4AP35499 1836 aa16.9■□□□□ 0.3
SNX29-207ENST00000568949 ARFGEF2Q9Y6D5 1785 aa16.89■□□□□ 0.3
SNX29-207ENST00000568949 DIAPH1O60610 1272 aaKnown RBP16.89■□□□□ 0.29
SNX29-207ENST00000568949 PRPF40BQ6NWY9 871 aaKnown RBP16.89■□□□□ 0.29
SNX29-207ENST00000568949 ZNF790Q6PG37 636 aa16.89■□□□□ 0.29
SNX29-207ENST00000568949 MASTLQ96GX5 879 aa16.89■□□□□ 0.29
SNX29-207ENST00000568949 ST5P78524 1137 aa16.88■□□□□ 0.29
SNX29-207ENST00000568949 TEFQ10587 303 aa16.88■□□□□ 0.29
SNX29-207ENST00000568949 NPM2Q86SE8 214 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms