RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 AMER1Q5JTC6 1135 aaPredicted RBP21.38■■□□□ 1.01
HERPUD1-215ENST00000568676 COL15A1P39059 1388 aa21.37■■□□□ 1.01
HERPUD1-215ENST00000568676 KCPQ6ZWJ8 1503 aa21.36■■□□□ 1.01
HERPUD1-215ENST00000568676 WDR90Q96KV7 1748 aa21.36■■□□□ 1.01
HERPUD1-215ENST00000568676 LGR6Q9HBX8 967 aa21.36■■□□□ 1.01
HERPUD1-215ENST00000568676 TNRC6CQ9HCJ0 1690 aaKnown RBP21.36■■□□□ 1.01
HERPUD1-215ENST00000568676 NRXN2Q9P2S2 1712 aa21.35■■□□□ 1.01
HERPUD1-215ENST00000568676 NFIXQ14938 502 aa21.34■■□□□ 1.01
HERPUD1-215ENST00000568676 KLRG1Q96E93 195 aa21.33■■□□□ 1.01
HERPUD1-215ENST00000568676 ZBTB1Q9Y2K1 713 aa21.33■■□□□ 1.01
HERPUD1-215ENST00000568676 A0A087WZG4 1122 aa21.32■■□□□ 1
HERPUD1-215ENST00000568676 DIAPH1O60610 1272 aaKnown RBP21.32■■□□□ 1
HERPUD1-215ENST00000568676 STARD3NLO95772 234 aa21.32■■□□□ 1
HERPUD1-215ENST00000568676 SERPINB2P05120 415 aa21.32■■□□□ 1
HERPUD1-215ENST00000568676 LMNB1P20700 586 aa21.32■■□□□ 1
HERPUD1-215ENST00000568676 SLC39A6Q13433 755 aa21.32■■□□□ 1
HERPUD1-215ENST00000568676 TTLL6Q8N841 843 aa21.32■■□□□ 1
HERPUD1-215ENST00000568676 SMC1BQ8NDV3 1235 aa21.32■■□□□ 1
HERPUD1-215ENST00000568676 RRAGCQ9HB90 399 aa21.32■■□□□ 1
HERPUD1-215ENST00000568676 PDZRN3Q9UPQ7 1066 aa21.32■■□□□ 1
HERPUD1-215ENST00000568676 SBF1O95248 1867 aa21.31■■□□□ 1
HERPUD1-215ENST00000568676 HMOX1P09601 288 aa21.31■■□□□ 1
HERPUD1-215ENST00000568676 MTHFSDQ2M296 383 aaKnown RBP21.31■■□□□ 1
HERPUD1-215ENST00000568676 TTC5Q8N0Z6 440 aa21.31■■□□□ 1
HERPUD1-215ENST00000568676 JMYQ8N9B5 988 aa21.31■■□□□ 1
HERPUD1-215ENST00000568676 TEX13AQ9BXU3 409 aaPredicted RBP21.3■■□□□ 1
HERPUD1-215ENST00000568676 DLEC1Q9Y238 1755 aa21.3■■□□□ 1
HERPUD1-215ENST00000568676 AFDNP55196 1824 aaKnown RBP21.29■■□□□ 1
HERPUD1-215ENST00000568676 UBR2Q8IWV8 1755 aa21.29■■□□□ 1
HERPUD1-215ENST00000568676 H0YIN7 160 aa21.29■■□□□ 1
HERPUD1-215ENST00000568676 BCL2L12Q9HB09 334 aa21.29■■□□□ 1
HERPUD1-215ENST00000568676 VIRMAQ69YN4 1812 aaKnown RBP21.28■■□□□ 1
HERPUD1-215ENST00000568676 GLTPD2A6NH11 291 aa21.28■■□□□ 1
HERPUD1-215ENST00000568676 VEGFAP15692 232 aaPredicted RBP21.28■■□□□ 1
HERPUD1-215ENST00000568676 KIF7Q2M1P5 1343 aa21.28■■□□□ 1
HERPUD1-215ENST00000568676 EIF5P55010 431 aaKnown RBP21.27■■□□□ 1
HERPUD1-215ENST00000568676 C2CD5Q86YS7 1000 aa21.27■■□□□ 1
HERPUD1-215ENST00000568676 PER1O15534 1290 aaPredicted RBP21.26■□□□□ 0.99
HERPUD1-215ENST00000568676 CANXP27824 592 aaKnown RBP21.26■□□□□ 0.99
HERPUD1-215ENST00000568676 RASSF7Q02833 373 aa21.26■□□□□ 0.99
HERPUD1-215ENST00000568676 GAS2L2Q8NHY3 880 aa21.26■□□□□ 0.99
HERPUD1-215ENST00000568676 CCER1Q8TC90 406 aaPredicted RBP21.26■□□□□ 0.99
HERPUD1-215ENST00000568676 TEFQ10587 303 aa21.25■□□□□ 0.99
HERPUD1-215ENST00000568676 NPC1L1Q9UHC9 1359 aa21.24■□□□□ 0.99
HERPUD1-215ENST00000568676 PDE6BP35913 854 aa21.24■□□□□ 0.99
HERPUD1-215ENST00000568676 ZNF790Q6PG37 636 aa21.24■□□□□ 0.99
HERPUD1-215ENST00000568676 HEG1Q9ULI3 1381 aa21.23■□□□□ 0.99
HERPUD1-215ENST00000568676 GNAT3A8MTJ3 354 aa21.23■□□□□ 0.99
HERPUD1-215ENST00000568676 DPY19L2Q6NUT2 758 aa21.23■□□□□ 0.99
HERPUD1-215ENST00000568676 NPM2Q86SE8 214 aaKnown RBP21.23■□□□□ 0.99
HERPUD1-215ENST00000568676 BRIP1Q9BX63 1249 aa21.23■□□□□ 0.99
HERPUD1-215ENST00000568676 IL6STP40189 918 aaPredicted RBP21.22■□□□□ 0.99
HERPUD1-215ENST00000568676 CARMIL3Q8ND23 1372 aa21.22■□□□□ 0.99
HERPUD1-215ENST00000568676 NFKBIEO00221 500 aa21.21■□□□□ 0.99
HERPUD1-215ENST00000568676 HTRA3P83110 453 aa21.21■□□□□ 0.99
HERPUD1-215ENST00000568676 CC2D1BQ5T0F9 858 aaKnown RBP21.21■□□□□ 0.99
HERPUD1-215ENST00000568676 ZNF496Q96IT1 587 aaPredicted RBP21.21■□□□□ 0.99
HERPUD1-215ENST00000568676 BICDL1Q6ZP65 573 aa21.2■□□□□ 0.98
HERPUD1-215ENST00000568676 FMNL2Q96PY5 1086 aa21.2■□□□□ 0.98
HERPUD1-215ENST00000568676 SCN7AQ01118 1682 aa21.2■□□□□ 0.98
HERPUD1-215ENST00000568676 TIAM2Q8IVF5 1701 aa21.2■□□□□ 0.98
HERPUD1-215ENST00000568676 PRELPP51888 382 aa21.19■□□□□ 0.98
HERPUD1-215ENST00000568676 TBC1D9BQ66K14 1250 aa21.19■□□□□ 0.98
HERPUD1-215ENST00000568676 IL17REQ8NFR9 667 aa21.19■□□□□ 0.98
HERPUD1-215ENST00000568676 COL3A1P02461 1466 aaPredicted RBP21.19■□□□□ 0.98
HERPUD1-215ENST00000568676 U2SURPO15042 1029 aaKnown RBP21.18■□□□□ 0.98
HERPUD1-215ENST00000568676 ZNF622Q969S3 477 aaKnown RBP eCLIP21.18■□□□□ 0.98
HERPUD1-215ENST00000568676 LTBP3Q9NS15 1303 aa21.18■□□□□ 0.98
HERPUD1-215ENST00000568676 SOGA3Q5TF21 947 aa21.17■□□□□ 0.98
HERPUD1-215ENST00000568676 PRR5LQ6MZQ0 368 aa21.17■□□□□ 0.98
HERPUD1-215ENST00000568676 SETDB2Q96T68 719 aa21.17■□□□□ 0.98
HERPUD1-215ENST00000568676 CEMIPQ8WUJ3 1361 aa21.17■□□□□ 0.98
HERPUD1-215ENST00000568676 SIPA1L3O60292 1781 aaPredicted RBP21.16■□□□□ 0.98
HERPUD1-215ENST00000568676 CNKSR1Q969H4 720 aa21.16■□□□□ 0.98
HERPUD1-215ENST00000568676 NPHP1O15259 732 aa21.15■□□□□ 0.98
HERPUD1-215ENST00000568676 ST5P78524 1137 aa21.15■□□□□ 0.98
HERPUD1-215ENST00000568676 ERFEQ4G0M1 354 aa21.15■□□□□ 0.98
HERPUD1-215ENST00000568676 STYK1Q6J9G0 422 aa21.15■□□□□ 0.98
HERPUD1-215ENST00000568676 CNBD1Q8NA66 436 aa21.15■□□□□ 0.98
HERPUD1-215ENST00000568676 TBC1D2BQ9UPU7 963 aa21.15■□□□□ 0.98
HERPUD1-215ENST00000568676 ZNF330Q9Y3S2 320 aaPredicted RBP21.15■□□□□ 0.98
HERPUD1-215ENST00000568676 ANKRD31Q8N7Z5 1873 aa21.14■□□□□ 0.97
HERPUD1-215ENST00000568676 C21orf2O43822 256 aa21.14■□□□□ 0.97
HERPUD1-215ENST00000568676 CAMTA2O94983 1202 aa21.13■□□□□ 0.97
HERPUD1-215ENST00000568676 COL13A1Q5TAT6 717 aaPredicted RBP21.13■□□□□ 0.97
HERPUD1-215ENST00000568676 CLEC4GQ6UXB4 293 aa21.13■□□□□ 0.97
HERPUD1-215ENST00000568676 TAOK3Q9H2K8 898 aa21.13■□□□□ 0.97
HERPUD1-215ENST00000568676 CCDC88AQ3V6T2 1871 aa21.13■□□□□ 0.97
HERPUD1-215ENST00000568676 FER1L6Q2WGJ9 1857 aa21.12■□□□□ 0.97
HERPUD1-215ENST00000568676 BTBD11A6QL63 1104 aa21.12■□□□□ 0.97
HERPUD1-215ENST00000568676 RGL2O15211 777 aa21.12■□□□□ 0.97
HERPUD1-215ENST00000568676 MASTLQ96GX5 879 aa21.12■□□□□ 0.97
HERPUD1-215ENST00000568676 CFAP53Q96M91 514 aa21.12■□□□□ 0.97
HERPUD1-215ENST00000568676 DICER1Q9UPY3 1922 aaKnown RBP21.12■□□□□ 0.97
HERPUD1-215ENST00000568676 POTECB2RU33 542 aa21.11■□□□□ 0.97
HERPUD1-215ENST00000568676 A1BGP04217 495 aa21.11■□□□□ 0.97
HERPUD1-215ENST00000568676 SRGNP10124 158 aa21.11■□□□□ 0.97
HERPUD1-215ENST00000568676 DZIP3Q86Y13 1208 aaKnown RBP21.11■□□□□ 0.97
HERPUD1-215ENST00000568676 ZNF652Q9Y2D9 606 aa21.11■□□□□ 0.97
HERPUD1-215ENST00000568676 COL11A2P13942 1736 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms