RNA–Protein interactions for RNA: ENST00000568151.1

SPG7-217, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 4

Gene SPG7, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-217ENST00000568151 TAF7Q15545 349 aaPredicted RBP30.11■■■□□ 2.41
SPG7-217ENST00000568151 TEX13AQ9BXU3 409 aaPredicted RBP30.11■■■□□ 2.41
SPG7-217ENST00000568151 THUMPD2Q9BTF0 503 aaKnown RBP30.1■■■□□ 2.41
SPG7-217ENST00000568151 COL15A1P39059 1388 aa30.1■■■□□ 2.41
SPG7-217ENST00000568151 CANXP27824 592 aaKnown RBP30.09■■■□□ 2.41
SPG7-217ENST00000568151 UTRNP46939 3433 aa30.09■■■□□ 2.41
SPG7-217ENST00000568151 FKBP8Q14318 412 aa30.08■■■□□ 2.41
SPG7-217ENST00000568151 WDR43Q15061 677 aaKnown RBP eCLIP30.08■■■□□ 2.41
SPG7-217ENST00000568151 MIS18AQ9NYP9 233 aa30.08■■■□□ 2.41
SPG7-217ENST00000568151 GOLGB1Q14789 3259 aaKnown RBP30.07■■■□□ 2.4
SPG7-217ENST00000568151 CCDC146Q8IYE0 955 aa30.07■■■□□ 2.4
SPG7-217ENST00000568151 ADAMTS8Q9UP79 889 aa30.07■■■□□ 2.4
SPG7-217ENST00000568151 KDM3BQ7LBC6 1761 aa30.06■■■□□ 2.4
SPG7-217ENST00000568151 EIF5P55010 431 aaKnown RBP30.06■■■□□ 2.4
SPG7-217ENST00000568151 PRAMEF22A3QJZ6 481 aa30.05■■■□□ 2.4
SPG7-217ENST00000568151 TMPOP42166 694 aaKnown RBP30.05■■■□□ 2.4
SPG7-217ENST00000568151 RIPK4P57078 832 aa30.05■■■□□ 2.4
SPG7-217ENST00000568151 USPL1Q5W0Q7 1092 aa30.05■■■□□ 2.4
SPG7-217ENST00000568151 NARFQ9UHQ1 456 aa30.05■■■□□ 2.4
SPG7-217ENST00000568151 KIF13BQ9NQT8 1826 aa30.04■■■□□ 2.4
SPG7-217ENST00000568151 ZPR1O75312 459 aa30.04■■■□□ 2.4
SPG7-217ENST00000568151 GPR162Q16538 588 aa30.04■■■□□ 2.4
SPG7-217ENST00000568151 USP16Q9Y5T5 823 aa30.04■■■□□ 2.4
SPG7-217ENST00000568151 A1BGP04217 495 aa30.03■■■□□ 2.4
SPG7-217ENST00000568151 SNRPA1P09661 255 aaKnown RBP30.03■■■□□ 2.4
SPG7-217ENST00000568151 DDR1Q08345 913 aa30.02■■■□□ 2.4
SPG7-217ENST00000568151 PNISRQ8TF01 805 aaKnown RBP30.02■■■□□ 2.4
SPG7-217ENST00000568151 RUNDC1Q96C34 613 aa30.02■■■□□ 2.4
SPG7-217ENST00000568151 PELP1Q8IZL8 1130 aaKnown RBP30.01■■■□□ 2.39
SPG7-217ENST00000568151 BCL2L12Q9HB09 334 aa30.01■■■□□ 2.39
SPG7-217ENST00000568151 RRP7AQ9Y3A4 280 aaKnown RBP30.01■■■□□ 2.39
SPG7-217ENST00000568151 PARP3Q9Y6F1 533 aa30.01■■■□□ 2.39
SPG7-217ENST00000568151 C10orf71Q711Q0 1435 aa30■■■□□ 2.39
SPG7-217ENST00000568151 TM4SF1P30408 202 aa30■■■□□ 2.39
SPG7-217ENST00000568151 IL6STP40189 918 aaPredicted RBP30■■■□□ 2.39
SPG7-217ENST00000568151 YBX3P16989 372 aaKnown RBP eCLIP29.99■■■□□ 2.39
SPG7-217ENST00000568151 KIAA1551Q9HCM1 1747 aa29.99■■■□□ 2.39
SPG7-217ENST00000568151 A0A087WZG4 1122 aa29.98■■■□□ 2.39
SPG7-217ENST00000568151 YY1P25490 414 aa29.97■■■□□ 2.39
SPG7-217ENST00000568151 CHD4Q14839 1912 aa29.96■■■□□ 2.39
SPG7-217ENST00000568151 POLRMTO00411 1230 aaKnown RBP29.96■■■□□ 2.39
SPG7-217ENST00000568151 LMOD3Q0VAK6 560 aa29.96■■■□□ 2.39
SPG7-217ENST00000568151 NEUROD2Q15784 382 aa29.96■■■□□ 2.39
SPG7-217ENST00000568151 CCDC184Q52MB2 194 aa29.96■■■□□ 2.39
SPG7-217ENST00000568151 ZNF330Q9Y3S2 320 aaPredicted RBP29.96■■■□□ 2.39
SPG7-217ENST00000568151 LAMB4A4D0S4 1761 aa29.95■■■□□ 2.39
SPG7-217ENST00000568151 SCN7AQ01118 1682 aa29.95■■■□□ 2.39
SPG7-217ENST00000568151 PXDNLA1KZ92 1463 aa29.95■■■□□ 2.39
SPG7-217ENST00000568151 PIP4K2AP48426 406 aaPredicted RBP29.95■■■□□ 2.39
SPG7-217ENST00000568151 EIF4A1P60842 406 aaKnown RBP29.95■■■□□ 2.39
SPG7-217ENST00000568151 NFIXQ14938 502 aa29.95■■■□□ 2.39
SPG7-217ENST00000568151 TBC1D2BQ9UPU7 963 aa29.94■■■□□ 2.38
SPG7-217ENST00000568151 N4BP2Q86UW6 1770 aaPredicted RBP29.93■■■□□ 2.38
SPG7-217ENST00000568151 TRIM35Q9UPQ4 493 aa29.93■■■□□ 2.38
SPG7-217ENST00000568151 NBPF26B4DH59 902 aa29.92■■■□□ 2.38
SPG7-217ENST00000568151 GIGYF1O75420 1035 aaPredicted RBP29.92■■■□□ 2.38
SPG7-217ENST00000568151 NBPF10Q6P3W6 841 aaKnown RBP29.92■■■□□ 2.38
SPG7-217ENST00000568151 NBPF15Q8N660 670 aa29.92■■■□□ 2.38
SPG7-217ENST00000568151 AFDNP55196 1824 aaKnown RBP29.92■■■□□ 2.38
SPG7-217ENST00000568151 TGFB2P61812 414 aa29.91■■■□□ 2.38
SPG7-217ENST00000568151 TSPYL4Q9UJ04 414 aa29.91■■■□□ 2.38
SPG7-217ENST00000568151 WWC3Q9ULE0 1092 aa29.91■■■□□ 2.38
SPG7-217ENST00000568151 NRXN2Q9P2S2 1712 aa29.9■■■□□ 2.38
SPG7-217ENST00000568151 CAMTA2O94983 1202 aa29.89■■■□□ 2.38
SPG7-217ENST00000568151 BABAM1Q9NWV8 329 aa29.89■■■□□ 2.38
SPG7-217ENST00000568151 BCORQ6W2J9 1755 aa29.89■■■□□ 2.38
SPG7-217ENST00000568151 A0A0G2JLW4 131 aa29.88■■■□□ 2.37
SPG7-217ENST00000568151 GRIN3BO60391 1043 aa29.88■■■□□ 2.37
SPG7-217ENST00000568151 NPM2Q86SE8 214 aaKnown RBP29.88■■■□□ 2.37
SPG7-217ENST00000568151 ANP32CO43423 234 aa29.87■■■□□ 2.37
SPG7-217ENST00000568151 DPEP1P16444 411 aa29.87■■■□□ 2.37
SPG7-217ENST00000568151 DZIP3Q86Y13 1208 aaKnown RBP29.87■■■□□ 2.37
SPG7-217ENST00000568151 TBC1D9BQ66K14 1250 aa29.86■■■□□ 2.37
SPG7-217ENST00000568151 BRCA1P38398 1863 aaKnown RBP29.85■■■□□ 2.37
SPG7-217ENST00000568151 SERPINB2P05120 415 aa29.85■■■□□ 2.37
SPG7-217ENST00000568151 BICDL1Q6ZP65 573 aa29.85■■■□□ 2.37
SPG7-217ENST00000568151 APAF1O14727 1248 aa29.84■■■□□ 2.37
SPG7-217ENST00000568151 KCNA3P22001 575 aa29.83■■■□□ 2.37
SPG7-217ENST00000568151 CHL1O00533 1208 aa29.82■■■□□ 2.36
SPG7-217ENST00000568151 MRS2Q9HD23 443 aa29.79■■■□□ 2.36
SPG7-217ENST00000568151 CARMIL3Q8ND23 1372 aa29.78■■■□□ 2.36
SPG7-217ENST00000568151 CHRNA5P30532 468 aa29.78■■■□□ 2.36
SPG7-217ENST00000568151 LAS1LQ9Y4W2 734 aaKnown RBP29.78■■■□□ 2.36
SPG7-217ENST00000568151 CLEC4GQ6UXB4 293 aa29.77■■■□□ 2.36
SPG7-217ENST00000568151 BCS1LQ9Y276 419 aa29.77■■■□□ 2.36
SPG7-217ENST00000568151 SETDB2Q96T68 719 aa29.76■■■□□ 2.35
SPG7-217ENST00000568151 KRT24Q2M2I5 525 aa29.75■■■□□ 2.35
SPG7-217ENST00000568151 NGEFQ8N5V2 710 aa29.75■■■□□ 2.35
SPG7-217ENST00000568151 ERBB4Q15303 1308 aa29.74■■■□□ 2.35
SPG7-217ENST00000568151 ANKRD31Q8N7Z5 1873 aa29.74■■■□□ 2.35
SPG7-217ENST00000568151 RGL2O15211 777 aa29.74■■■□□ 2.35
SPG7-217ENST00000568151 MYL6BP14649 208 aa29.74■■■□□ 2.35
SPG7-217ENST00000568151 CFAP44Q96MT7 982 aa29.74■■■□□ 2.35
SPG7-217ENST00000568151 PIM2Q9P1W9 311 aa29.74■■■□□ 2.35
SPG7-217ENST00000568151 ZNF652Q9Y2D9 606 aa29.74■■■□□ 2.35
SPG7-217ENST00000568151 EIF2S2P20042 333 aaKnown RBP29.73■■■□□ 2.35
SPG7-217ENST00000568151 HLFQ16534 295 aa29.73■■■□□ 2.35
SPG7-217ENST00000568151 PRR5LQ6MZQ0 368 aa29.73■■■□□ 2.35
SPG7-217ENST00000568151 ARFGEF1Q9Y6D6 1849 aa29.73■■■□□ 2.35
SPG7-217ENST00000568151 PDIA6Q15084 440 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms