RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 TGFB2P61812 414 aa24.04■■□□□ 1.44
COMMD4-218ENST00000567377 MCM10Q7L590 875 aa24.04■■□□□ 1.44
COMMD4-218ENST00000567377 NARFQ9UHQ1 456 aa24.04■■□□□ 1.44
COMMD4-218ENST00000567377 ZBTB1Q9Y2K1 713 aa24.04■■□□□ 1.44
COMMD4-218ENST00000567377 TAF7Q15545 349 aaPredicted RBP24.03■■□□□ 1.44
COMMD4-218ENST00000567377 NFE2L2Q16236 605 aa24.03■■□□□ 1.44
COMMD4-218ENST00000567377 COL15A1P39059 1388 aa24.03■■□□□ 1.44
COMMD4-218ENST00000567377 C4AP0C0L4 1744 aa24.02■■□□□ 1.44
COMMD4-218ENST00000567377 GOLGB1Q14789 3259 aaKnown RBP24.02■■□□□ 1.44
COMMD4-218ENST00000567377 PNISRQ8TF01 805 aaKnown RBP24.02■■□□□ 1.44
COMMD4-218ENST00000567377 SRP68Q9UHB9 627 aaKnown RBP24.02■■□□□ 1.44
COMMD4-218ENST00000567377 EIF5P55010 431 aaKnown RBP24.01■■□□□ 1.43
COMMD4-218ENST00000567377 FKBP8Q14318 412 aa24.01■■□□□ 1.43
COMMD4-218ENST00000567377 NPM2Q86SE8 214 aaKnown RBP24.01■■□□□ 1.43
COMMD4-218ENST00000567377 YBX3P16989 372 aaKnown RBP eCLIP24■■□□□ 1.43
COMMD4-218ENST00000567377 CANXP27824 592 aaKnown RBP24■■□□□ 1.43
COMMD4-218ENST00000567377 SNRPA1P09661 255 aaKnown RBP23.99■■□□□ 1.43
COMMD4-218ENST00000567377 TM4SF1P30408 202 aa23.99■■□□□ 1.43
COMMD4-218ENST00000567377 IL6STP40189 918 aaPredicted RBP23.99■■□□□ 1.43
COMMD4-218ENST00000567377 USPL1Q5W0Q7 1092 aa23.99■■□□□ 1.43
COMMD4-218ENST00000567377 DCTN1Q14203 1278 aa23.98■■□□□ 1.43
COMMD4-218ENST00000567377 C10orf71Q711Q0 1435 aa23.98■■□□□ 1.43
COMMD4-218ENST00000567377 KCNQ3O43525 872 aa23.97■■□□□ 1.43
COMMD4-218ENST00000567377 KIF13BQ9NQT8 1826 aa23.96■■□□□ 1.43
COMMD4-218ENST00000567377 PRKRIP1Q9H875 184 aaPredicted RBP23.96■■□□□ 1.43
COMMD4-218ENST00000567377 POLRMTO00411 1230 aaKnown RBP23.94■■□□□ 1.42
COMMD4-218ENST00000567377 DDR1Q08345 913 aa23.94■■□□□ 1.42
COMMD4-218ENST00000567377 LMOD3Q0VAK6 560 aa23.94■■□□□ 1.42
COMMD4-218ENST00000567377 WDR43Q15061 677 aaKnown RBP eCLIP23.94■■□□□ 1.42
COMMD4-218ENST00000567377 USP16Q9Y5T5 823 aa23.93■■□□□ 1.42
COMMD4-218ENST00000567377 PXDNLA1KZ92 1463 aa23.93■■□□□ 1.42
COMMD4-218ENST00000567377 A1BGP04217 495 aa23.92■■□□□ 1.42
COMMD4-218ENST00000567377 NFIXQ14938 502 aa23.92■■□□□ 1.42
COMMD4-218ENST00000567377 ZNF784Q8NCA9 323 aaPredicted RBP23.92■■□□□ 1.42
COMMD4-218ENST00000567377 DLG5Q8TDM6 1919 aa23.91■■□□□ 1.42
COMMD4-218ENST00000567377 RIPK4P57078 832 aa23.91■■□□□ 1.42
COMMD4-218ENST00000567377 BCL2L12Q9HB09 334 aa23.91■■□□□ 1.42
COMMD4-218ENST00000567377 BABAM1Q9NWV8 329 aa23.91■■□□□ 1.42
COMMD4-218ENST00000567377 A0A0G2JLW4 131 aa23.9■■□□□ 1.42
COMMD4-218ENST00000567377 RGL2O15211 777 aa23.89■■□□□ 1.41
COMMD4-218ENST00000567377 DPEP1P16444 411 aa23.89■■□□□ 1.41
COMMD4-218ENST00000567377 TMPOP42166 694 aaKnown RBP23.89■■□□□ 1.41
COMMD4-218ENST00000567377 ZNF330Q9Y3S2 320 aaPredicted RBP23.89■■□□□ 1.41
COMMD4-218ENST00000567377 SERPINB2P05120 415 aa23.88■■□□□ 1.41
COMMD4-218ENST00000567377 RUNDC1Q96C34 613 aa23.88■■□□□ 1.41
COMMD4-218ENST00000567377 PIM2Q9P1W9 311 aa23.88■■□□□ 1.41
COMMD4-218ENST00000567377 TBC1D2BQ9UPU7 963 aa23.88■■□□□ 1.41
COMMD4-218ENST00000567377 CLEC4GQ6UXB4 293 aa23.87■■□□□ 1.41
COMMD4-218ENST00000567377 MIS18AQ9NYP9 233 aa23.87■■□□□ 1.41
COMMD4-218ENST00000567377 EIF4A1P60842 406 aaKnown RBP23.86■■□□□ 1.41
COMMD4-218ENST00000567377 DZIP3Q86Y13 1208 aaKnown RBP23.86■■□□□ 1.41
COMMD4-218ENST00000567377 BCS1LQ9Y276 419 aa23.86■■□□□ 1.41
COMMD4-218ENST00000567377 GIGYF1O75420 1035 aaPredicted RBP23.85■■□□□ 1.41
COMMD4-218ENST00000567377 PDZRN3Q9UPQ7 1066 aa23.85■■□□□ 1.41
COMMD4-218ENST00000567377 ZNF652Q9Y2D9 606 aa23.85■■□□□ 1.41
COMMD4-218ENST00000567377 PRAMEF22A3QJZ6 481 aa23.84■■□□□ 1.41
COMMD4-218ENST00000567377 CAMTA2O94983 1202 aa23.84■■□□□ 1.41
COMMD4-218ENST00000567377 KCNA3P22001 575 aa23.84■■□□□ 1.41
COMMD4-218ENST00000567377 SETDB2Q96T68 719 aa23.84■■□□□ 1.41
COMMD4-218ENST00000567377 ADAMTS8Q9UP79 889 aa23.84■■□□□ 1.41
COMMD4-218ENST00000567377 KIAA1551Q9HCM1 1747 aa23.84■■□□□ 1.41
COMMD4-218ENST00000567377 DALRD3Q5D0E6 543 aaKnown RBP23.83■■□□□ 1.41
COMMD4-218ENST00000567377 THUMPD2Q9BTF0 503 aaKnown RBP23.83■■□□□ 1.41
COMMD4-218ENST00000567377 TSPYL4Q9UJ04 414 aa23.83■■□□□ 1.41
COMMD4-218ENST00000567377 N4BP2Q86UW6 1770 aaPredicted RBP23.83■■□□□ 1.4
COMMD4-218ENST00000567377 CARMIL3Q8ND23 1372 aa23.82■■□□□ 1.4
COMMD4-218ENST00000567377 TBC1D9BQ66K14 1250 aa23.82■■□□□ 1.4
COMMD4-218ENST00000567377 BICDL1Q6ZP65 573 aa23.82■■□□□ 1.4
COMMD4-218ENST00000567377 WWC3Q9ULE0 1092 aa23.82■■□□□ 1.4
COMMD4-218ENST00000567377 NRXN2Q9P2S2 1712 aa23.81■■□□□ 1.4
COMMD4-218ENST00000567377 KDM3BQ7LBC6 1761 aa23.81■■□□□ 1.4
COMMD4-218ENST00000567377 ZNF316A6NFI3 1004 aaPredicted RBP23.81■■□□□ 1.4
COMMD4-218ENST00000567377 SCN7AQ01118 1682 aa23.8■■□□□ 1.4
COMMD4-218ENST00000567377 NBPF26B4DH59 902 aa23.8■■□□□ 1.4
COMMD4-218ENST00000567377 NBPF10Q6P3W6 841 aaKnown RBP23.8■■□□□ 1.4
COMMD4-218ENST00000567377 CCDC146Q8IYE0 955 aa23.8■■□□□ 1.4
COMMD4-218ENST00000567377 NBPF15Q8N660 670 aa23.8■■□□□ 1.4
COMMD4-218ENST00000567377 ERBB4Q15303 1308 aa23.8■■□□□ 1.4
COMMD4-218ENST00000567377 BRIP1Q9BX63 1249 aa23.79■■□□□ 1.4
COMMD4-218ENST00000567377 AFDNP55196 1824 aaKnown RBP23.79■■□□□ 1.4
COMMD4-218ENST00000567377 H0YIN7 160 aa23.78■■□□□ 1.4
COMMD4-218ENST00000567377 PDE6BP35913 854 aa23.78■■□□□ 1.4
COMMD4-218ENST00000567377 BRCA1P38398 1863 aaKnown RBP23.77■■□□□ 1.4
COMMD4-218ENST00000567377 CHRNA5P30532 468 aa23.77■■□□□ 1.4
COMMD4-218ENST00000567377 PIP4K2AP48426 406 aaPredicted RBP23.77■■□□□ 1.4
COMMD4-218ENST00000567377 NEUROD2Q15784 382 aa23.77■■□□□ 1.4
COMMD4-218ENST00000567377 ARHGAP27Q6ZUM4 889 aa23.77■■□□□ 1.4
COMMD4-218ENST00000567377 NPHP1O15259 732 aa23.76■■□□□ 1.39
COMMD4-218ENST00000567377 RRP7AQ9Y3A4 280 aaKnown RBP23.76■■□□□ 1.39
COMMD4-218ENST00000567377 LAMB4A4D0S4 1761 aa23.75■■□□□ 1.39
COMMD4-218ENST00000567377 ERVV-1B6SEH8 477 aa23.75■■□□□ 1.39
COMMD4-218ENST00000567377 PRR5LQ6MZQ0 368 aa23.75■■□□□ 1.39
COMMD4-218ENST00000567377 CNBD1Q8NA66 436 aa23.75■■□□□ 1.39
COMMD4-218ENST00000567377 CHL1O00533 1208 aa23.74■■□□□ 1.39
COMMD4-218ENST00000567377 ST5P78524 1137 aa23.74■■□□□ 1.39
COMMD4-218ENST00000567377 C2CD5Q86YS7 1000 aa23.74■■□□□ 1.39
COMMD4-218ENST00000567377 TTLL6Q8N841 843 aa23.74■■□□□ 1.39
COMMD4-218ENST00000567377 TRIM35Q9UPQ4 493 aa23.74■■□□□ 1.39
COMMD4-218ENST00000567377 ARFGEF1Q9Y6D6 1849 aa23.74■■□□□ 1.39
COMMD4-218ENST00000567377 ADCY9O60503 1353 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms