RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 PTGER2P43116 358 aa16.29■□□□□ 0.2
RNF40-211ENST00000567365 MIER1Q8N108 512 aa16.29■□□□□ 0.2
RNF40-211ENST00000567365 FLAD1Q8NFF5 587 aa16.29■□□□□ 0.2
RNF40-211ENST00000567365 PRAMEF22A3QJZ6 481 aa16.28■□□□□ 0.2
RNF40-211ENST00000567365 FAM9BQ8IZU0 186 aa16.28■□□□□ 0.2
RNF40-211ENST00000567365 TEX13AQ9BXU3 409 aaPredicted RBP16.28■□□□□ 0.2
RNF40-211ENST00000567365 MTFR1LQ9H019 292 aa16.28■□□□□ 0.2
RNF40-211ENST00000567365 CCDC87Q9NVE4 849 aa16.28■□□□□ 0.2
RNF40-211ENST00000567365 SOS1Q07889 1333 aaPredicted RBP16.27■□□□□ 0.2
RNF40-211ENST00000567365 GIGYF1O75420 1035 aaPredicted RBP16.27■□□□□ 0.2
RNF40-211ENST00000567365 SNRPA1P09661 255 aaKnown RBP16.27■□□□□ 0.2
RNF40-211ENST00000567365 ADRA2BP18089 450 aa16.27■□□□□ 0.2
RNF40-211ENST00000567365 WWC1Q8IX03 1113 aa16.27■□□□□ 0.2
RNF40-211ENST00000567365 CFAP44Q96MT7 982 aa16.27■□□□□ 0.2
RNF40-211ENST00000567365 ZBTB1Q9Y2K1 713 aa16.27■□□□□ 0.2
RNF40-211ENST00000567365 RTCBQ9Y3I0 505 aaKnown RBP16.27■□□□□ 0.2
RNF40-211ENST00000567365 USP16Q9Y5T5 823 aa16.27■□□□□ 0.2
RNF40-211ENST00000567365 STARD3NLO95772 234 aa16.26■□□□□ 0.19
RNF40-211ENST00000567365 TSPYL4Q9UJ04 414 aa16.26■□□□□ 0.19
RNF40-211ENST00000567365 ATF5Q9Y2D1 282 aaPredicted RBP16.26■□□□□ 0.19
RNF40-211ENST00000567365 EIF5P55010 431 aaKnown RBP16.25■□□□□ 0.19
RNF40-211ENST00000567365 IFT57Q9NWB7 429 aa16.25■□□□□ 0.19
RNF40-211ENST00000567365 ARHGEF1Q92888 912 aaKnown RBP16.24■□□□□ 0.19
RNF40-211ENST00000567365 SENP3-EIF4A1A0A087X0R7 540 aa16.23■□□□□ 0.19
RNF40-211ENST00000567365 PHF14O94880 888 aa16.23■□□□□ 0.19
RNF40-211ENST00000567365 A1BGP04217 495 aa16.23■□□□□ 0.19
RNF40-211ENST00000567365 TRAPPC3LQ5T215 181 aa16.23■□□□□ 0.19
RNF40-211ENST00000567365 NGEFQ8N5V2 710 aa16.23■□□□□ 0.19
RNF40-211ENST00000567365 IL16Q14005 1332 aa16.22■□□□□ 0.19
RNF40-211ENST00000567365 ZNF521Q96K83 1311 aa16.22■□□□□ 0.19
RNF40-211ENST00000567365 NBPF26B4DH59 902 aa16.22■□□□□ 0.19
RNF40-211ENST00000567365 IL6STP40189 918 aaPredicted RBP16.22■□□□□ 0.19
RNF40-211ENST00000567365 CALD1Q05682 793 aaKnown RBP16.22■□□□□ 0.19
RNF40-211ENST00000567365 NBPF10Q6P3W6 841 aaKnown RBP16.22■□□□□ 0.19
RNF40-211ENST00000567365 NBPF15Q8N660 670 aa16.22■□□□□ 0.19
RNF40-211ENST00000567365 MBIPQ9NS73 344 aa16.22■□□□□ 0.19
RNF40-211ENST00000567365 COL15A1P39059 1388 aa16.22■□□□□ 0.19
RNF40-211ENST00000567365 USP42Q9H9J4 1324 aaKnown RBP16.21■□□□□ 0.19
RNF40-211ENST00000567365 GNAI1P63096 354 aa16.21■□□□□ 0.19
RNF40-211ENST00000567365 KRT24Q2M2I5 525 aa16.21■□□□□ 0.19
RNF40-211ENST00000567365 GYS1P13807 737 aa16.2■□□□□ 0.18
RNF40-211ENST00000567365 WDR63Q8IWG1 891 aa16.2■□□□□ 0.18
RNF40-211ENST00000567365 FHDC1Q9C0D6 1143 aaPredicted RBP16.2■□□□□ 0.18
RNF40-211ENST00000567365 SCN7AQ01118 1682 aa16.2■□□□□ 0.18
RNF40-211ENST00000567365 DCAF8L1A6NGE4 600 aa16.19■□□□□ 0.18
RNF40-211ENST00000567365 CANXP27824 592 aaKnown RBP16.19■□□□□ 0.18
RNF40-211ENST00000567365 LRP10Q7Z4F1 713 aa16.19■□□□□ 0.18
RNF40-211ENST00000567365 SYT17Q9BSW7 474 aa16.19■□□□□ 0.18
RNF40-211ENST00000567365 BCL2L12Q9HB09 334 aa16.19■□□□□ 0.18
RNF40-211ENST00000567365 NARFQ9UHQ1 456 aa16.19■□□□□ 0.18
RNF40-211ENST00000567365 BCORQ6W2J9 1755 aa16.18■□□□□ 0.18
RNF40-211ENST00000567365 MSH5O43196 834 aa16.18■□□□□ 0.18
RNF40-211ENST00000567365 HOXB7P09629 217 aa16.18■□□□□ 0.18
RNF40-211ENST00000567365 RFC4P35249 363 aa16.18■□□□□ 0.18
RNF40-211ENST00000567365 SRP68Q9UHB9 627 aaKnown RBP16.18■□□□□ 0.18
RNF40-211ENST00000567365 LAS1LQ9Y4W2 734 aaKnown RBP16.18■□□□□ 0.18
RNF40-211ENST00000567365 GOLGB1Q14789 3259 aaKnown RBP16.18■□□□□ 0.18
RNF40-211ENST00000567365 ERBB4Q15303 1308 aa16.18■□□□□ 0.18
RNF40-211ENST00000567365 PIP4K2AP48426 406 aaPredicted RBP16.17■□□□□ 0.18
RNF40-211ENST00000567365 PDIA6Q15084 440 aa16.17■□□□□ 0.18
RNF40-211ENST00000567365 MSL1Q68DK7 614 aa16.17■□□□□ 0.18
RNF40-211ENST00000567365 SPINK5Q9NQ38 1064 aaPredicted RBP16.17■□□□□ 0.18
RNF40-211ENST00000567365 FKBP8Q14318 412 aa16.16■□□□□ 0.18
RNF40-211ENST00000567365 SALL2Q9Y467 1007 aaPredicted RBP16.16■□□□□ 0.18
RNF40-211ENST00000567365 A0A087WZG4 1122 aa16.15■□□□□ 0.18
RNF40-211ENST00000567365 NLGN1Q8N2Q7 840 aa16.15■□□□□ 0.18
RNF40-211ENST00000567365 C8orf58Q8NAV2 365 aa16.15■□□□□ 0.18
RNF40-211ENST00000567365 ZNF784Q8NCA9 323 aaPredicted RBP16.15■□□□□ 0.18
RNF40-211ENST00000567365 ARXQ96QS3 562 aa16.15■□□□□ 0.18
RNF40-211ENST00000567365 UTRNP46939 3433 aa16.15■□□□□ 0.18
RNF40-211ENST00000567365 CAMTA2O94983 1202 aa16.14■□□□□ 0.17
RNF40-211ENST00000567365 TM4SF1P30408 202 aa16.14■□□□□ 0.17
RNF40-211ENST00000567365 DUSP27Q5VZP5 1158 aa16.14■□□□□ 0.17
RNF40-211ENST00000567365 USPL1Q5W0Q7 1092 aa16.14■□□□□ 0.17
RNF40-211ENST00000567365 TSR2Q969E8 191 aaKnown RBP16.14■□□□□ 0.17
RNF40-211ENST00000567365 FANCIQ9NVI1 1328 aa16.14■□□□□ 0.17
RNF40-211ENST00000567365 NRXN2Q9P2S2 1712 aa16.14■□□□□ 0.17
RNF40-211ENST00000567365 RGL2O15211 777 aa16.13■□□□□ 0.17
RNF40-211ENST00000567365 POLD1P28340 1107 aa16.13■□□□□ 0.17
RNF40-211ENST00000567365 PROSER3Q2NL68 480 aa16.13■□□□□ 0.17
RNF40-211ENST00000567365 KIF13BQ9NQT8 1826 aa16.12■□□□□ 0.17
RNF40-211ENST00000567365 ZPR1O75312 459 aa16.12■□□□□ 0.17
RNF40-211ENST00000567365 MMP10P09238 476 aa16.12■□□□□ 0.17
RNF40-211ENST00000567365 DDR1Q08345 913 aa16.12■□□□□ 0.17
RNF40-211ENST00000567365 TSPYL6Q8N831 410 aa16.12■□□□□ 0.17
RNF40-211ENST00000567365 TBC1D2BQ9UPU7 963 aa16.12■□□□□ 0.17
RNF40-211ENST00000567365 EIF2S2P20042 333 aaKnown RBP16.11■□□□□ 0.17
RNF40-211ENST00000567365 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
RNF40-211ENST00000567365 DDX21Q9NR30 783 aaKnown RBP eCLIP16.11■□□□□ 0.17
RNF40-211ENST00000567365 KIAA1551Q9HCM1 1747 aa16.11■□□□□ 0.17
RNF40-211ENST00000567365 AFDNP55196 1824 aaKnown RBP16.1■□□□□ 0.17
RNF40-211ENST00000567365 NFIXQ14938 502 aa16.1■□□□□ 0.17
RNF40-211ENST00000567365 TTLL7Q6ZT98 887 aa16.1■□□□□ 0.17
RNF40-211ENST00000567365 POLRMTO00411 1230 aaKnown RBP16.09■□□□□ 0.17
RNF40-211ENST00000567365 ANXA1P04083 346 aa16.09■□□□□ 0.17
RNF40-211ENST00000567365 HDGFL1Q5TGJ6 251 aa16.09■□□□□ 0.17
RNF40-211ENST00000567365 CLEC4GQ6UXB4 293 aa16.09■□□□□ 0.17
RNF40-211ENST00000567365 CHPF2Q9P2E5 772 aa16.09■□□□□ 0.17
RNF40-211ENST00000567365 NUP98P52948 1817 aa16.09■□□□□ 0.17
RNF40-211ENST00000567365 C10orf71Q711Q0 1435 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms