RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 TTC12Q9H892 705 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-215ENST00000566843 CCDC61Q9Y6R9 512 aa18.89■□□□□ 0.61
COMMD4-215ENST00000566843 TRIM6-TRIM34B2RNG4 842 aa18.88■□□□□ 0.61
COMMD4-215ENST00000566843 ZSCAN22P10073 491 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-215ENST00000566843 ZNF142P52746 1687 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-215ENST00000566843 XRN1Q8IZH2 1706 aaKnown RBP18.88■□□□□ 0.61
COMMD4-215ENST00000566843 UNC5CLQ8IV45 518 aa18.88■□□□□ 0.61
COMMD4-215ENST00000566843 CNPY2Q9Y2B0 182 aa18.88■□□□□ 0.61
COMMD4-215ENST00000566843 N4BP2Q86UW6 1770 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-215ENST00000566843 HCLS1P14317 486 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-215ENST00000566843 FOXD4L6Q3SYB3 417 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-215ENST00000566843 FOXD4L3Q6VB84 417 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-215ENST00000566843 ANKLE2Q86XL3 938 aa18.87■□□□□ 0.61
COMMD4-215ENST00000566843 TTC14Q96N46 770 aa18.87■□□□□ 0.61
COMMD4-215ENST00000566843 PNMA6EA0A0J9YXQ4 647 aa18.86■□□□□ 0.61
COMMD4-215ENST00000566843 JARID2Q92833 1246 aaPredicted RBP18.86■□□□□ 0.61
COMMD4-215ENST00000566843 KIF3AQ9Y496 699 aa18.86■□□□□ 0.61
COMMD4-215ENST00000566843 ZSCAN20P17040 1043 aaPredicted RBP18.86■□□□□ 0.61
COMMD4-215ENST00000566843 SIRT1Q96EB6 747 aa18.86■□□□□ 0.61
COMMD4-215ENST00000566843 ARID3AQ99856 593 aa18.85■□□□□ 0.61
COMMD4-215ENST00000566843 IL25Q9H293 177 aa18.85■□□□□ 0.61
COMMD4-215ENST00000566843 PEAK1Q9H792 1746 aa18.85■□□□□ 0.61
COMMD4-215ENST00000566843 TPM3P06753 285 aa18.85■□□□□ 0.61
COMMD4-215ENST00000566843 MPNDQ8N594 471 aa18.85■□□□□ 0.61
COMMD4-215ENST00000566843 TSC1Q92574 1164 aa18.85■□□□□ 0.61
COMMD4-215ENST00000566843 RAD50Q92878 1312 aa18.84■□□□□ 0.61
COMMD4-215ENST00000566843 C17orf53Q8N3J3 647 aaPredicted RBP18.84■□□□□ 0.61
COMMD4-215ENST00000566843 KIAA1524Q8TCG1 905 aa18.84■□□□□ 0.61
COMMD4-215ENST00000566843 OVOS2A0A0J9YW53 1432 aa18.84■□□□□ 0.61
COMMD4-215ENST00000566843 OVOS2Q6IE36 1432 aa18.84■□□□□ 0.61
COMMD4-215ENST00000566843 NCKAP5LQ9HCH0 1330 aa18.84■□□□□ 0.61
COMMD4-215ENST00000566843 STX6O43752 255 aa18.84■□□□□ 0.61
COMMD4-215ENST00000566843 F13A1P00488 732 aa18.84■□□□□ 0.61
COMMD4-215ENST00000566843 TSPYL4Q9UJ04 414 aa18.84■□□□□ 0.61
COMMD4-215ENST00000566843 NALCNQ8IZF0 1738 aa18.84■□□□□ 0.61
COMMD4-215ENST00000566843 PRDM10Q9NQV6 1147 aa18.83■□□□□ 0.61
COMMD4-215ENST00000566843 MIS18AQ9NYP9 233 aa18.83■□□□□ 0.61
COMMD4-215ENST00000566843 SNX14Q9Y5W7 946 aa18.83■□□□□ 0.61
COMMD4-215ENST00000566843 FAM208AQ9UK61 1670 aaKnown RBP18.83■□□□□ 0.6
COMMD4-215ENST00000566843 SYT1P21579 422 aa18.83■□□□□ 0.6
COMMD4-215ENST00000566843 TBX22Q9Y458 520 aa18.83■□□□□ 0.6
COMMD4-215ENST00000566843 ATP6V1DQ9Y5K8 247 aa18.83■□□□□ 0.6
COMMD4-215ENST00000566843 TTC21BQ7Z4L5 1316 aa18.82■□□□□ 0.6
COMMD4-215ENST00000566843 SGSM2O43147 1006 aa18.82■□□□□ 0.6
COMMD4-215ENST00000566843 BCL2L12Q9HB09 334 aa18.82■□□□□ 0.6
COMMD4-215ENST00000566843 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-215ENST00000566843 TECPR2O15040 1411 aa18.82■□□□□ 0.6
COMMD4-215ENST00000566843 PTPRUQ92729 1446 aa18.82■□□□□ 0.6
COMMD4-215ENST00000566843 STK31Q9BXU1 1019 aa18.81■□□□□ 0.6
COMMD4-215ENST00000566843 LIMCH1Q9UPQ0 1083 aa18.81■□□□□ 0.6
COMMD4-215ENST00000566843 PXDNLA1KZ92 1463 aa18.81■□□□□ 0.6
COMMD4-215ENST00000566843 AP5Z1O43299 807 aa18.81■□□□□ 0.6
COMMD4-215ENST00000566843 FLIIQ13045 1269 aa18.81■□□□□ 0.6
COMMD4-215ENST00000566843 RUFY3Q7L099 469 aa18.81■□□□□ 0.6
COMMD4-215ENST00000566843 GTPBP4Q9BZE4 634 aaKnown RBP18.81■□□□□ 0.6
COMMD4-215ENST00000566843 LSG1Q9H089 658 aaKnown RBP18.81■□□□□ 0.6
COMMD4-215ENST00000566843 KCNF1Q9H3M0 494 aa18.81■□□□□ 0.6
COMMD4-215ENST00000566843 ROBO2Q9HCK4 1378 aa18.81■□□□□ 0.6
COMMD4-215ENST00000566843 CACNA1FO60840 1977 aa18.81■□□□□ 0.6
COMMD4-215ENST00000566843 AK2P54819 239 aa18.8■□□□□ 0.6
COMMD4-215ENST00000566843 DIAPH3Q9NSV4 1193 aa18.8■□□□□ 0.6
COMMD4-215ENST00000566843 AMOTL2Q9Y2J4 779 aa18.8■□□□□ 0.6
COMMD4-215ENST00000566843 PRR36Q9H6K5 1346 aa18.8■□□□□ 0.6
COMMD4-215ENST00000566843 RAB11FIP3O75154 756 aa18.8■□□□□ 0.6
COMMD4-215ENST00000566843 SSH3Q8TE77 659 aa18.8■□□□□ 0.6
COMMD4-215ENST00000566843 USP31Q70CQ4 1352 aa18.8■□□□□ 0.6
COMMD4-215ENST00000566843 SOS1Q07889 1333 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-215ENST00000566843 ZBTB7CA1YPR0 619 aa18.79■□□□□ 0.6
COMMD4-215ENST00000566843 HSP90AB2PQ58FF8 381 aa18.79■□□□□ 0.6
COMMD4-215ENST00000566843 PI4K2BQ8TCG2 481 aa18.79■□□□□ 0.6
COMMD4-215ENST00000566843 LRRFIP2Q9Y608 721 aaKnown RBP18.79■□□□□ 0.6
COMMD4-215ENST00000566843 LRRC37A3O60309 1634 aa18.79■□□□□ 0.6
COMMD4-215ENST00000566843 HSPA2P54652 639 aa18.79■□□□□ 0.6
COMMD4-215ENST00000566843 MTHFSDQ2M296 383 aaKnown RBP18.79■□□□□ 0.6
COMMD4-215ENST00000566843 PPP4R3BQ5MIZ7 849 aa18.79■□□□□ 0.6
COMMD4-215ENST00000566843 ANKRD7Q92527 254 aa18.79■□□□□ 0.6
COMMD4-215ENST00000566843 RTF1Q92541 710 aaKnown RBP18.79■□□□□ 0.6
COMMD4-215ENST00000566843 PYCARDQ9ULZ3 195 aa18.79■□□□□ 0.6
COMMD4-215ENST00000566843 SMC3Q9UQE7 1217 aa18.79■□□□□ 0.6
COMMD4-215ENST00000566843 CRYBG1Q9Y4K1 1723 aa18.79■□□□□ 0.6
COMMD4-215ENST00000566843 ATP2B3Q16720 1220 aa18.78■□□□□ 0.6
COMMD4-215ENST00000566843 CCDC30Q5VVM6 783 aa18.78■□□□□ 0.6
COMMD4-215ENST00000566843 GIMAP6Q6P9H5 292 aa18.78■□□□□ 0.6
COMMD4-215ENST00000566843 CTIFO43310 598 aaKnown RBP18.77■□□□□ 0.6
COMMD4-215ENST00000566843 FOXO3O43524 673 aa18.77■□□□□ 0.6
COMMD4-215ENST00000566843 FIBPO43427 364 aa18.77■□□□□ 0.6
COMMD4-215ENST00000566843 RASEFQ8IZ41 740 aa18.77■□□□□ 0.6
COMMD4-215ENST00000566843 MTMR6Q9Y217 621 aa18.77■□□□□ 0.6
COMMD4-215ENST00000566843 MAP3K19Q56UN5 1328 aa18.77■□□□□ 0.59
COMMD4-215ENST00000566843 KDRP35968 1356 aa18.77■□□□□ 0.59
COMMD4-215ENST00000566843 POLA2Q14181 598 aa18.76■□□□□ 0.59
COMMD4-215ENST00000566843 USP44Q9H0E7 712 aa18.76■□□□□ 0.59
COMMD4-215ENST00000566843 GOLGA6L6A8MZA4 724 aa18.76■□□□□ 0.59
COMMD4-215ENST00000566843 RIOK3O14730 519 aaKnown RBP18.76■□□□□ 0.59
COMMD4-215ENST00000566843 HTATSF1O43719 755 aaKnown RBP18.76■□□□□ 0.59
COMMD4-215ENST00000566843 CBX1P83916 185 aa18.76■□□□□ 0.59
COMMD4-215ENST00000566843 TOPAZ1Q8N9V7 1692 aa18.76■□□□□ 0.59
COMMD4-215ENST00000566843 FMN2Q9NZ56 1722 aa18.75■□□□□ 0.59
COMMD4-215ENST00000566843 NUTM1Q86Y26 1132 aa18.75■□□□□ 0.59
COMMD4-215ENST00000566843 PDCL2Q8N4E4 241 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms