RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 SOS1Q07889 1333 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-214ENST00000566230 CYP19A1P11511 503 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-214ENST00000566230 EIF4G2P78344 907 aaKnown RBP eCLIP18.28■□□□□ 0.52
COMMD4-214ENST00000566230 AKAP4Q5JQC9 854 aa18.28■□□□□ 0.52
COMMD4-214ENST00000566230 KLRG1Q96E93 195 aa18.28■□□□□ 0.52
COMMD4-214ENST00000566230 SLC52A2Q9HAB3 445 aa18.28■□□□□ 0.52
COMMD4-214ENST00000566230 ZPR1O75312 459 aa18.27■□□□□ 0.52
COMMD4-214ENST00000566230 JMYQ8N9B5 988 aa18.27■□□□□ 0.52
COMMD4-214ENST00000566230 DLEC1Q9Y238 1755 aa18.27■□□□□ 0.51
COMMD4-214ENST00000566230 PRELPP51888 382 aa18.26■□□□□ 0.51
COMMD4-214ENST00000566230 RASSF7Q02833 373 aa18.26■□□□□ 0.51
COMMD4-214ENST00000566230 SLC39A6Q13433 755 aa18.26■□□□□ 0.51
COMMD4-214ENST00000566230 NFIXQ14938 502 aa18.26■□□□□ 0.51
COMMD4-214ENST00000566230 BCL2L12Q9HB09 334 aa18.26■□□□□ 0.51
COMMD4-214ENST00000566230 NARFQ9UHQ1 456 aa18.26■□□□□ 0.51
COMMD4-214ENST00000566230 RNMTO43148 476 aaKnown RBP18.25■□□□□ 0.51
COMMD4-214ENST00000566230 MRC1P22897 1456 aa18.25■□□□□ 0.51
COMMD4-214ENST00000566230 PCNTO95613 3336 aa18.25■□□□□ 0.51
COMMD4-214ENST00000566230 COL15A1P39059 1388 aa18.23■□□□□ 0.51
COMMD4-214ENST00000566230 COL13A1Q5TAT6 717 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-214ENST00000566230 ZBTB1Q9Y2K1 713 aa18.23■□□□□ 0.51
COMMD4-214ENST00000566230 KNSTRNQ9Y448 316 aa18.23■□□□□ 0.51
COMMD4-214ENST00000566230 SERPINB2P05120 415 aa18.22■□□□□ 0.51
COMMD4-214ENST00000566230 UBR2Q8IWV8 1755 aa18.22■□□□□ 0.51
COMMD4-214ENST00000566230 ZC3H4Q9UPT8 1303 aaKnown RBP18.22■□□□□ 0.51
COMMD4-214ENST00000566230 HMOX1P09601 288 aa18.21■□□□□ 0.51
COMMD4-214ENST00000566230 LMNB1P20700 586 aa18.21■□□□□ 0.51
COMMD4-214ENST00000566230 AMER1Q5JTC6 1135 aaPredicted RBP18.21■□□□□ 0.51
COMMD4-214ENST00000566230 SMC1BQ8NDV3 1235 aa18.21■□□□□ 0.51
COMMD4-214ENST00000566230 CARMIL3Q8ND23 1372 aa18.2■□□□□ 0.5
COMMD4-214ENST00000566230 GLTPD2A6NH11 291 aa18.2■□□□□ 0.5
COMMD4-214ENST00000566230 MTHFSDQ2M296 383 aaKnown RBP18.2■□□□□ 0.5
COMMD4-214ENST00000566230 TTLL6Q8N841 843 aa18.2■□□□□ 0.5
COMMD4-214ENST00000566230 TIAM2Q8IVF5 1701 aa18.2■□□□□ 0.5
COMMD4-214ENST00000566230 C2CD5Q86YS7 1000 aa18.19■□□□□ 0.5
COMMD4-214ENST00000566230 VSIG10Q8N0Z9 540 aa18.19■□□□□ 0.5
COMMD4-214ENST00000566230 ANKRD31Q8N7Z5 1873 aa18.19■□□□□ 0.5
COMMD4-214ENST00000566230 NFKBIEO00221 500 aa18.18■□□□□ 0.5
COMMD4-214ENST00000566230 VEGFAP15692 232 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-214ENST00000566230 CANXP27824 592 aaKnown RBP18.17■□□□□ 0.5
COMMD4-214ENST00000566230 EIF5P55010 431 aaKnown RBP18.17■□□□□ 0.5
COMMD4-214ENST00000566230 DICER1Q9UPY3 1922 aaKnown RBP18.17■□□□□ 0.5
COMMD4-214ENST00000566230 POTECB2RU33 542 aa18.16■□□□□ 0.5
COMMD4-214ENST00000566230 H0YIN7 160 aa18.16■□□□□ 0.5
COMMD4-214ENST00000566230 BICDL1Q6ZP65 573 aa18.16■□□□□ 0.5
COMMD4-214ENST00000566230 FER1L6Q2WGJ9 1857 aa18.15■□□□□ 0.5
COMMD4-214ENST00000566230 TBC1D9BQ66K14 1250 aa18.14■□□□□ 0.49
COMMD4-214ENST00000566230 COL11A2P13942 1736 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-214ENST00000566230 SIPA1L3O60292 1781 aaPredicted RBP18.13■□□□□ 0.49
COMMD4-214ENST00000566230 STARD3NLO95772 234 aa18.13■□□□□ 0.49
COMMD4-214ENST00000566230 DIAPH1O60610 1272 aaKnown RBP18.12■□□□□ 0.49
COMMD4-214ENST00000566230 CCDC24Q8N4L8 307 aa18.12■□□□□ 0.49
COMMD4-214ENST00000566230 ZNF496Q96IT1 587 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-214ENST00000566230 SCN7AQ01118 1682 aa18.12■□□□□ 0.49
COMMD4-214ENST00000566230 A0A087WZG4 1122 aa18.11■□□□□ 0.49
COMMD4-214ENST00000566230 PER1O15534 1290 aaPredicted RBP18.11■□□□□ 0.49
COMMD4-214ENST00000566230 TNS4Q8IZW8 715 aa18.11■□□□□ 0.49
COMMD4-214ENST00000566230 IL17REQ8NFR9 667 aa18.11■□□□□ 0.49
COMMD4-214ENST00000566230 SLX4Q8IY92 1834 aa18.1■□□□□ 0.49
COMMD4-214ENST00000566230 HEG1Q9ULI3 1381 aa18.1■□□□□ 0.49
COMMD4-214ENST00000566230 KIF7Q2M1P5 1343 aa18.1■□□□□ 0.49
COMMD4-214ENST00000566230 C21orf2O43822 256 aa18.1■□□□□ 0.49
COMMD4-214ENST00000566230 CAPN15O75808 1086 aa18.1■□□□□ 0.49
COMMD4-214ENST00000566230 PRR5LQ6MZQ0 368 aa18.1■□□□□ 0.49
COMMD4-214ENST00000566230 TTC5Q8N0Z6 440 aa18.1■□□□□ 0.49
COMMD4-214ENST00000566230 ZNF622Q969S3 477 aaKnown RBP eCLIP18.1■□□□□ 0.49
COMMD4-214ENST00000566230 BRIP1Q9BX63 1249 aa18.1■□□□□ 0.49
COMMD4-214ENST00000566230 ZNF219Q9P2Y4 722 aaPredicted RBP18.1■□□□□ 0.49
COMMD4-214ENST00000566230 TBC1D2BQ9UPU7 963 aa18.1■□□□□ 0.49
COMMD4-214ENST00000566230 CACNA1SQ13698 1873 aa18.09■□□□□ 0.49
COMMD4-214ENST00000566230 ZNF790Q6PG37 636 aa18.09■□□□□ 0.49
COMMD4-214ENST00000566230 COL3A1P02461 1466 aaPredicted RBP18.08■□□□□ 0.49
COMMD4-214ENST00000566230 HSPA1AP0DMV8 641 aaKnown RBP18.08■□□□□ 0.48
COMMD4-214ENST00000566230 HSPA1BP0DMV9 641 aaKnown RBP18.08■□□□□ 0.48
COMMD4-214ENST00000566230 PDE6BP35913 854 aa18.08■□□□□ 0.48
COMMD4-214ENST00000566230 CC2D1BQ5T0F9 858 aaKnown RBP18.08■□□□□ 0.48
COMMD4-214ENST00000566230 DPY19L2Q6NUT2 758 aa18.08■□□□□ 0.48
COMMD4-214ENST00000566230 PDZRN3Q9UPQ7 1066 aa18.08■□□□□ 0.48
COMMD4-214ENST00000566230 A1BGP04217 495 aa18.07■□□□□ 0.48
COMMD4-214ENST00000566230 IL6STP40189 918 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-214ENST00000566230 ERFEQ4G0M1 354 aa18.07■□□□□ 0.48
COMMD4-214ENST00000566230 TEX13AQ9BXU3 409 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-214ENST00000566230 GNAT3A8MTJ3 354 aa18.06■□□□□ 0.48
COMMD4-214ENST00000566230 CAMTA2O94983 1202 aa18.06■□□□□ 0.48
COMMD4-214ENST00000566230 TEFQ10587 303 aa18.06■□□□□ 0.48
COMMD4-214ENST00000566230 ZNF330Q9Y3S2 320 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-214ENST00000566230 LTBP3Q9NS15 1303 aa18.05■□□□□ 0.48
COMMD4-214ENST00000566230 ARFGEF2Q9Y6D5 1785 aa18.05■□□□□ 0.48
COMMD4-214ENST00000566230 BCORQ6W2J9 1755 aa18.04■□□□□ 0.48
COMMD4-214ENST00000566230 KCNQ3O43525 872 aa18.04■□□□□ 0.48
COMMD4-214ENST00000566230 DDNO94850 711 aaPredicted RBP18.04■□□□□ 0.48
COMMD4-214ENST00000566230 POTEIP0CG38 1075 aa18.04■□□□□ 0.48
COMMD4-214ENST00000566230 POTEJP0CG39 1038 aa18.04■□□□□ 0.48
COMMD4-214ENST00000566230 SETDB2Q96T68 719 aa18.04■□□□□ 0.48
COMMD4-214ENST00000566230 U2SURPO15042 1029 aaKnown RBP18.03■□□□□ 0.48
COMMD4-214ENST00000566230 SRGNP10124 158 aa18.03■□□□□ 0.48
COMMD4-214ENST00000566230 STYK1Q6J9G0 422 aa18.03■□□□□ 0.48
COMMD4-214ENST00000566230 CHADLQ6NUI6 762 aa18.03■□□□□ 0.48
COMMD4-214ENST00000566230 CNBD1Q8NA66 436 aa18.03■□□□□ 0.48
COMMD4-214ENST00000566230 GAS2L2Q8NHY3 880 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms