RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 NRXN2Q9P2S2 1712 aa25.43■■□□□ 1.66
ABCA3-204ENST00000566200 COL15A1P39059 1388 aa25.43■■□□□ 1.66
ABCA3-204ENST00000566200 VSIG10Q8N0Z9 540 aa25.41■■□□□ 1.66
ABCA3-204ENST00000566200 BCL2L12Q9HB09 334 aa25.41■■□□□ 1.66
ABCA3-204ENST00000566200 PIM2Q9P1W9 311 aa25.41■■□□□ 1.66
ABCA3-204ENST00000566200 U2SURPO15042 1029 aaKnown RBP25.4■■□□□ 1.66
ABCA3-204ENST00000566200 ZPR1O75312 459 aa25.4■■□□□ 1.66
ABCA3-204ENST00000566200 CHRNA5P30532 468 aa25.4■■□□□ 1.66
ABCA3-204ENST00000566200 IL17REQ8NFR9 667 aa25.4■■□□□ 1.66
ABCA3-204ENST00000566200 NARFQ9UHQ1 456 aa25.4■■□□□ 1.66
ABCA3-204ENST00000566200 NFIXQ14938 502 aa25.39■■□□□ 1.66
ABCA3-204ENST00000566200 DLEC1Q9Y238 1755 aa25.37■■□□□ 1.65
ABCA3-204ENST00000566200 HSPA6P17066 643 aa25.37■■□□□ 1.65
ABCA3-204ENST00000566200 DALRD3Q5D0E6 543 aaKnown RBP25.36■■□□□ 1.65
ABCA3-204ENST00000566200 ZNF496Q96IT1 587 aaPredicted RBP25.36■■□□□ 1.65
ABCA3-204ENST00000566200 SBF1O95248 1867 aa25.35■■□□□ 1.65
ABCA3-204ENST00000566200 GNAT3A8MTJ3 354 aa25.35■■□□□ 1.65
ABCA3-204ENST00000566200 CANXP27824 592 aaKnown RBP25.35■■□□□ 1.65
ABCA3-204ENST00000566200 GAS2L2Q8NHY3 880 aa25.35■■□□□ 1.65
ABCA3-204ENST00000566200 C9orf131Q5VYM1 1079 aa25.34■■□□□ 1.65
ABCA3-204ENST00000566200 PHACTR3Q96KR7 559 aa25.34■■□□□ 1.65
ABCA3-204ENST00000566200 CEMIPQ8WUJ3 1361 aa25.33■■□□□ 1.65
ABCA3-204ENST00000566200 HEG1Q9ULI3 1381 aa25.33■■□□□ 1.65
ABCA3-204ENST00000566200 SCN7AQ01118 1682 aa25.33■■□□□ 1.65
ABCA3-204ENST00000566200 EIF5P55010 431 aaKnown RBP25.33■■□□□ 1.65
ABCA3-204ENST00000566200 ZNF790Q6PG37 636 aa25.33■■□□□ 1.65
ABCA3-204ENST00000566200 TTC5Q8N0Z6 440 aa25.33■■□□□ 1.65
ABCA3-204ENST00000566200 TEFQ10587 303 aa25.32■■□□□ 1.64
ABCA3-204ENST00000566200 RSPH6AQ9H0K4 717 aa25.32■■□□□ 1.64
ABCA3-204ENST00000566200 NMRK2Q9NPI5 230 aa25.32■■□□□ 1.64
ABCA3-204ENST00000566200 CARMIL3Q8ND23 1372 aa25.31■■□□□ 1.64
ABCA3-204ENST00000566200 STARD3NLO95772 234 aa25.31■■□□□ 1.64
ABCA3-204ENST00000566200 SERPINB2P05120 415 aa25.31■■□□□ 1.64
ABCA3-204ENST00000566200 PRKAR2BP31323 418 aa25.3■■□□□ 1.64
ABCA3-204ENST00000566200 ANKRD31Q8N7Z5 1873 aa25.3■■□□□ 1.64
ABCA3-204ENST00000566200 KCNQ3O43525 872 aa25.28■■□□□ 1.64
ABCA3-204ENST00000566200 TOMM70O94826 608 aa25.27■■□□□ 1.64
ABCA3-204ENST00000566200 BICDL1Q6ZP65 573 aa25.26■■□□□ 1.63
ABCA3-204ENST00000566200 CFAP53Q96M91 514 aa25.26■■□□□ 1.63
ABCA3-204ENST00000566200 RNF181Q9P0P0 153 aa25.26■■□□□ 1.63
ABCA3-204ENST00000566200 PPP2R1AP30153 589 aa25.25■■□□□ 1.63
ABCA3-204ENST00000566200 TBC1D9BQ66K14 1250 aa25.25■■□□□ 1.63
ABCA3-204ENST00000566200 TEX13AQ9BXU3 409 aaPredicted RBP25.25■■□□□ 1.63
ABCA3-204ENST00000566200 BCORQ6W2J9 1755 aa25.24■■□□□ 1.63
ABCA3-204ENST00000566200 COL11A2P13942 1736 aaPredicted RBP25.24■■□□□ 1.63
ABCA3-204ENST00000566200 A0A087WZG4 1122 aa25.24■■□□□ 1.63
ABCA3-204ENST00000566200 A1BGP04217 495 aa25.24■■□□□ 1.63
ABCA3-204ENST00000566200 PRELPP51888 382 aa25.24■■□□□ 1.63
ABCA3-204ENST00000566200 RASSF7Q02833 373 aa25.24■■□□□ 1.63
ABCA3-204ENST00000566200 FMNL2Q96PY5 1086 aa25.24■■□□□ 1.63
ABCA3-204ENST00000566200 IL6STP40189 918 aaPredicted RBP25.23■■□□□ 1.63
ABCA3-204ENST00000566200 TBC1D2BQ9UPU7 963 aa25.23■■□□□ 1.63
ABCA3-204ENST00000566200 BTBD11A6QL63 1104 aa25.22■■□□□ 1.63
ABCA3-204ENST00000566200 C2CD5Q86YS7 1000 aa25.22■■□□□ 1.63
ABCA3-204ENST00000566200 TNRC6CQ9HCJ0 1690 aaKnown RBP25.22■■□□□ 1.63
ABCA3-204ENST00000566200 ZNF330Q9Y3S2 320 aaPredicted RBP25.21■■□□□ 1.63
ABCA3-204ENST00000566200 CCDC88AQ3V6T2 1871 aa25.21■■□□□ 1.63
ABCA3-204ENST00000566200 U2AF1L5P0DN76 240 aaPredicted RBP25.2■■□□□ 1.62
ABCA3-204ENST00000566200 U2AF1Q01081 240 aaKnown RBP eCLIP25.2■■□□□ 1.62
ABCA3-204ENST00000566200 TTLL6Q8N841 843 aa25.2■■□□□ 1.62
ABCA3-204ENST00000566200 NUDCQ9Y266 331 aa25.2■■□□□ 1.62
ABCA3-204ENST00000566200 PRAMEF22A3QJZ6 481 aa25.19■■□□□ 1.62
ABCA3-204ENST00000566200 CAMTA2O94983 1202 aa25.19■■□□□ 1.62
ABCA3-204ENST00000566200 MCM10Q7L590 875 aa25.19■■□□□ 1.62
ABCA3-204ENST00000566200 USP16Q9Y5T5 823 aa25.19■■□□□ 1.62
ABCA3-204ENST00000566200 TIAM2Q8IVF5 1701 aa25.19■■□□□ 1.62
ABCA3-204ENST00000566200 KDM2BQ8NHM5 1336 aa25.18■■□□□ 1.62
ABCA3-204ENST00000566200 H0YIN7 160 aa25.18■■□□□ 1.62
ABCA3-204ENST00000566200 PRR5LQ6MZQ0 368 aa25.18■■□□□ 1.62
ABCA3-204ENST00000566200 CCDC24Q8N4L8 307 aa25.18■■□□□ 1.62
ABCA3-204ENST00000566200 NFKBIEO00221 500 aa25.17■■□□□ 1.62
ABCA3-204ENST00000566200 PIP4K2AP48426 406 aaPredicted RBP25.17■■□□□ 1.62
ABCA3-204ENST00000566200 APLP1P51693 650 aa25.17■■□□□ 1.62
ABCA3-204ENST00000566200 RBM46Q8TBY0 533 aaKnown RBP25.17■■□□□ 1.62
ABCA3-204ENST00000566200 WDR90Q96KV7 1748 aa25.17■■□□□ 1.62
ABCA3-204ENST00000566200 DCTN1Q14203 1278 aa25.16■■□□□ 1.62
ABCA3-204ENST00000566200 BRIP1Q9BX63 1249 aa25.16■■□□□ 1.62
ABCA3-204ENST00000566200 RRAGCQ9HB90 399 aa25.16■■□□□ 1.62
ABCA3-204ENST00000566200 LMNB1P20700 586 aa25.15■■□□□ 1.62
ABCA3-204ENST00000566200 DNAJC5GQ8N7S2 189 aa25.14■■□□□ 1.62
ABCA3-204ENST00000566200 FER1L6Q2WGJ9 1857 aa25.14■■□□□ 1.61
ABCA3-204ENST00000566200 DLG5Q8TDM6 1919 aa25.14■■□□□ 1.61
ABCA3-204ENST00000566200 ZC3H4Q9UPT8 1303 aaKnown RBP25.13■■□□□ 1.61
ABCA3-204ENST00000566200 CACNA1SQ13698 1873 aa25.13■■□□□ 1.61
ABCA3-204ENST00000566200 DZIP3Q86Y13 1208 aaKnown RBP25.13■■□□□ 1.61
ABCA3-204ENST00000566200 RTF1Q92541 710 aaKnown RBP25.13■■□□□ 1.61
ABCA3-204ENST00000566200 ARFGEF2Q9Y6D5 1785 aa25.11■■□□□ 1.61
ABCA3-204ENST00000566200 PDE6BP35913 854 aa25.11■■□□□ 1.61
ABCA3-204ENST00000566200 C16orf71Q8IYS4 520 aaPredicted RBP25.11■■□□□ 1.61
ABCA3-204ENST00000566200 ZNF622Q969S3 477 aaKnown RBP eCLIP25.11■■□□□ 1.61
ABCA3-204ENST00000566200 SETDB2Q96T68 719 aa25.11■■□□□ 1.61
ABCA3-204ENST00000566200 SLX4Q8IY92 1834 aa25.11■■□□□ 1.61
ABCA3-204ENST00000566200 HTATSF1O43719 755 aaKnown RBP25.1■■□□□ 1.61
ABCA3-204ENST00000566200 SNRPA1P09661 255 aaKnown RBP25.1■■□□□ 1.61
ABCA3-204ENST00000566200 LAMB4A4D0S4 1761 aa25.1■■□□□ 1.61
ABCA3-204ENST00000566200 DICER1Q9UPY3 1922 aaKnown RBP25.1■■□□□ 1.61
ABCA3-204ENST00000566200 KDM3BQ7LBC6 1761 aa25.09■■□□□ 1.61
ABCA3-204ENST00000566200 NBPF26B4DH59 902 aa25.09■■□□□ 1.61
ABCA3-204ENST00000566200 C21orf2O43822 256 aa25.09■■□□□ 1.61
ABCA3-204ENST00000566200 FSTL1Q12841 308 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms