RNA–Protein interactions for RNA: ENST00000566108.2

TNRC6A-211, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 454 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-211ENST00000566108 COL15A1P39059 1388 aa17.19■□□□□ 0.34
TNRC6A-211ENST00000566108 GIGYF1O75420 1035 aaPredicted RBP17.19■□□□□ 0.34
TNRC6A-211ENST00000566108 ZNF790Q6PG37 636 aa17.19■□□□□ 0.34
TNRC6A-211ENST00000566108 FMNL2Q96PY5 1086 aa17.19■□□□□ 0.34
TNRC6A-211ENST00000566108 SRP68Q9UHB9 627 aaKnown RBP17.19■□□□□ 0.34
TNRC6A-211ENST00000566108 SOS1Q07889 1333 aaPredicted RBP17.19■□□□□ 0.34
TNRC6A-211ENST00000566108 BTBD11A6QL63 1104 aa17.18■□□□□ 0.34
TNRC6A-211ENST00000566108 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
TNRC6A-211ENST00000566108 GOLGB1Q14789 3259 aaKnown RBP17.17■□□□□ 0.34
TNRC6A-211ENST00000566108 CANXP27824 592 aaKnown RBP17.17■□□□□ 0.34
TNRC6A-211ENST00000566108 FKBP8Q14318 412 aa17.17■□□□□ 0.34
TNRC6A-211ENST00000566108 USPL1Q5W0Q7 1092 aa17.17■□□□□ 0.34
TNRC6A-211ENST00000566108 IL17REQ8NFR9 667 aa17.17■□□□□ 0.34
TNRC6A-211ENST00000566108 NARFQ9UHQ1 456 aa17.17■□□□□ 0.34
TNRC6A-211ENST00000566108 BCS1LQ9Y276 419 aa17.17■□□□□ 0.34
TNRC6A-211ENST00000566108 PXDNLA1KZ92 1463 aa17.17■□□□□ 0.34
TNRC6A-211ENST00000566108 SIPA1L3O60292 1781 aaPredicted RBP17.16■□□□□ 0.34
TNRC6A-211ENST00000566108 N4BP2Q86UW6 1770 aaPredicted RBP17.16■□□□□ 0.34
TNRC6A-211ENST00000566108 PHACTR3Q96KR7 559 aa17.16■□□□□ 0.34
TNRC6A-211ENST00000566108 ZBTB1Q9Y2K1 713 aa17.16■□□□□ 0.34
TNRC6A-211ENST00000566108 ZNF330Q9Y3S2 320 aaPredicted RBP17.16■□□□□ 0.34
TNRC6A-211ENST00000566108 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
TNRC6A-211ENST00000566108 HEG1Q9ULI3 1381 aa17.15■□□□□ 0.34
TNRC6A-211ENST00000566108 A0A0G2JLW4 131 aa17.15■□□□□ 0.34
TNRC6A-211ENST00000566108 ZNF496Q96IT1 587 aaPredicted RBP17.15■□□□□ 0.34
TNRC6A-211ENST00000566108 HTATSF1O43719 755 aaKnown RBP17.14■□□□□ 0.33
TNRC6A-211ENST00000566108 PIM2Q9P1W9 311 aa17.14■□□□□ 0.33
TNRC6A-211ENST00000566108 ATP10DQ9P241 1426 aa17.13■□□□□ 0.33
TNRC6A-211ENST00000566108 DPEP1P16444 411 aa17.13■□□□□ 0.33
TNRC6A-211ENST00000566108 GPBP1L1Q9HC44 474 aaPredicted RBP17.13■□□□□ 0.33
TNRC6A-211ENST00000566108 MAPK8IP3Q9UPT6 1336 aa17.13■□□□□ 0.33
TNRC6A-211ENST00000566108 DDR1Q08345 913 aa17.12■□□□□ 0.33
TNRC6A-211ENST00000566108 DALRD3Q5D0E6 543 aaKnown RBP17.12■□□□□ 0.33
TNRC6A-211ENST00000566108 POLRMTO00411 1230 aaKnown RBP17.11■□□□□ 0.33
TNRC6A-211ENST00000566108 NPHP1O15259 732 aa17.11■□□□□ 0.33
TNRC6A-211ENST00000566108 IL6STP40189 918 aaPredicted RBP17.11■□□□□ 0.33
TNRC6A-211ENST00000566108 C1QTNF8P60827 252 aa17.11■□□□□ 0.33
TNRC6A-211ENST00000566108 RALBP1Q15311 655 aa17.11■□□□□ 0.33
TNRC6A-211ENST00000566108 ARHGAP27Q6ZUM4 889 aa17.11■□□□□ 0.33
TNRC6A-211ENST00000566108 MCM10Q7L590 875 aa17.11■□□□□ 0.33
TNRC6A-211ENST00000566108 KIAA1551Q9HCM1 1747 aa17.1■□□□□ 0.33
TNRC6A-211ENST00000566108 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
TNRC6A-211ENST00000566108 TM4SF1P30408 202 aa17.1■□□□□ 0.33
TNRC6A-211ENST00000566108 SNRPA1P09661 255 aaKnown RBP17.09■□□□□ 0.33
TNRC6A-211ENST00000566108 EIF5P55010 431 aaKnown RBP17.09■□□□□ 0.33
TNRC6A-211ENST00000566108 NFIXQ14938 502 aa17.09■□□□□ 0.33
TNRC6A-211ENST00000566108 PNISRQ8TF01 805 aaKnown RBP17.09■□□□□ 0.33
TNRC6A-211ENST00000566108 ARFGEF1Q9Y6D6 1849 aa17.09■□□□□ 0.33
TNRC6A-211ENST00000566108 BRCA1P38398 1863 aaKnown RBP17.09■□□□□ 0.33
TNRC6A-211ENST00000566108 SERPINB2P05120 415 aa17.08■□□□□ 0.32
TNRC6A-211ENST00000566108 TAF7Q15545 349 aaPredicted RBP17.08■□□□□ 0.32
TNRC6A-211ENST00000566108 BICDL1Q6ZP65 573 aa17.08■□□□□ 0.32
TNRC6A-211ENST00000566108 ADCY9O60503 1353 aa17.07■□□□□ 0.32
TNRC6A-211ENST00000566108 SENP3-EIF4A1A0A087X0R7 540 aa17.07■□□□□ 0.32
TNRC6A-211ENST00000566108 ZBTB22O15209 634 aa17.07■□□□□ 0.32
TNRC6A-211ENST00000566108 ZNF526Q8TF50 670 aaPredicted RBP17.07■□□□□ 0.32
TNRC6A-211ENST00000566108 AFDNP55196 1824 aaKnown RBP17.07■□□□□ 0.32
TNRC6A-211ENST00000566108 SCN7AQ01118 1682 aa17.07■□□□□ 0.32
TNRC6A-211ENST00000566108 CARMIL3Q8ND23 1372 aa17.06■□□□□ 0.32
TNRC6A-211ENST00000566108 PDZRN3Q9UPQ7 1066 aa17.06■□□□□ 0.32
TNRC6A-211ENST00000566108 TBC1D2BQ9UPU7 963 aa17.06■□□□□ 0.32
TNRC6A-211ENST00000566108 ZNF652Q9Y2D9 606 aa17.06■□□□□ 0.32
TNRC6A-211ENST00000566108 H0YIN7 160 aa17.05■□□□□ 0.32
TNRC6A-211ENST00000566108 CHRNA5P30532 468 aa17.05■□□□□ 0.32
TNRC6A-211ENST00000566108 DCTN1Q14203 1278 aa17.05■□□□□ 0.32
TNRC6A-211ENST00000566108 NFE2L2Q16236 605 aa17.05■□□□□ 0.32
TNRC6A-211ENST00000566108 SETDB2Q96T68 719 aa17.05■□□□□ 0.32
TNRC6A-211ENST00000566108 DLG5Q8TDM6 1919 aa17.04■□□□□ 0.32
TNRC6A-211ENST00000566108 KCNQ3O43525 872 aa17.04■□□□□ 0.32
TNRC6A-211ENST00000566108 A1BGP04217 495 aa17.04■□□□□ 0.32
TNRC6A-211ENST00000566108 DDX10Q13206 875 aaKnown RBP17.04■□□□□ 0.32
TNRC6A-211ENST00000566108 DZIP3Q86Y13 1208 aaKnown RBP17.04■□□□□ 0.32
TNRC6A-211ENST00000566108 BCL2L12Q9HB09 334 aa17.04■□□□□ 0.32
TNRC6A-211ENST00000566108 NRXN2Q9P2S2 1712 aa17.04■□□□□ 0.32
TNRC6A-211ENST00000566108 PDE6BP35913 854 aa17.03■□□□□ 0.32
TNRC6A-211ENST00000566108 ST5P78524 1137 aa17.03■□□□□ 0.32
TNRC6A-211ENST00000566108 C2CD5Q86YS7 1000 aa17.03■□□□□ 0.32
TNRC6A-211ENST00000566108 MYBBP1AQ9BQG0 1328 aaKnown RBP17.02■□□□□ 0.32
TNRC6A-211ENST00000566108 KCNA3P22001 575 aa17.02■□□□□ 0.32
TNRC6A-211ENST00000566108 LMOD3Q0VAK6 560 aa17.02■□□□□ 0.32
TNRC6A-211ENST00000566108 TBC1D9BQ66K14 1250 aa17.02■□□□□ 0.32
TNRC6A-211ENST00000566108 TTLL6Q8N841 843 aa17.02■□□□□ 0.32
TNRC6A-211ENST00000566108 CNBD1Q8NA66 436 aa17.02■□□□□ 0.32
TNRC6A-211ENST00000566108 FOXD4L1Q9NU39 408 aa17.02■□□□□ 0.32
TNRC6A-211ENST00000566108 USP16Q9Y5T5 823 aa17.02■□□□□ 0.32
TNRC6A-211ENST00000566108 CLEC4GQ6UXB4 293 aa17.01■□□□□ 0.31
TNRC6A-211ENST00000566108 LAMB4A4D0S4 1761 aa17■□□□□ 0.31
TNRC6A-211ENST00000566108 BCORQ6W2J9 1755 aa17■□□□□ 0.31
TNRC6A-211ENST00000566108 DLEC1Q9Y238 1755 aa17■□□□□ 0.31
TNRC6A-211ENST00000566108 WDR43Q15061 677 aaKnown RBP eCLIP17■□□□□ 0.31
TNRC6A-211ENST00000566108 C9orf131Q5VYM1 1079 aa17■□□□□ 0.31
TNRC6A-211ENST00000566108 PLEKHF1Q96S99 279 aa17■□□□□ 0.31
TNRC6A-211ENST00000566108 BRIP1Q9BX63 1249 aa17■□□□□ 0.31
TNRC6A-211ENST00000566108 CAMTA2O94983 1202 aa16.99■□□□□ 0.31
TNRC6A-211ENST00000566108 ZNF622Q969S3 477 aaKnown RBP eCLIP16.99■□□□□ 0.31
TNRC6A-211ENST00000566108 RNF181Q9P0P0 153 aa16.99■□□□□ 0.31
TNRC6A-211ENST00000566108 RGL2O15211 777 aa16.98■□□□□ 0.31
TNRC6A-211ENST00000566108 NBPF5PQ86XG9 351 aaPredicted RBP16.98■□□□□ 0.31
TNRC6A-211ENST00000566108 C16orf71Q8IYS4 520 aaPredicted RBP16.98■□□□□ 0.31
TNRC6A-211ENST00000566108 MIS18AQ9NYP9 233 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms