RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 ZNF518AQ6AHZ1 1483 aa12.45□□□□□ -0.42
USB1-212ENST00000566082 SHROOM2Q13796 1616 aa12.45□□□□□ -0.42
USB1-212ENST00000566082 SAMD9LQ8IVG5 1584 aa12.44□□□□□ -0.42
USB1-212ENST00000566082 APPP05067 770 aa12.44□□□□□ -0.42
USB1-212ENST00000566082 PTGS1P23219 599 aa12.44□□□□□ -0.42
USB1-212ENST00000566082 EIF4A2Q14240 407 aaKnown RBP12.44□□□□□ -0.42
USB1-212ENST00000566082 USHBP1Q8N6Y0 703 aa12.44□□□□□ -0.42
USB1-212ENST00000566082 CFAP45Q9UL16 551 aa12.44□□□□□ -0.42
USB1-212ENST00000566082 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
USB1-212ENST00000566082 CPLX2Q6PUV4 134 aaKnown RBP12.43□□□□□ -0.42
USB1-212ENST00000566082 GOLGA6L1Q8N7Z2 621 aa12.43□□□□□ -0.42
USB1-212ENST00000566082 DACT1Q9NYF0 836 aa12.43□□□□□ -0.42
USB1-212ENST00000566082 PALD1Q9ULE6 856 aa12.43□□□□□ -0.42
USB1-212ENST00000566082 PES1O00541 588 aaKnown RBP12.43□□□□□ -0.42
USB1-212ENST00000566082 BRD1O95696 1058 aa12.43□□□□□ -0.42
USB1-212ENST00000566082 WASHC4Q2M389 1173 aa12.43□□□□□ -0.42
USB1-212ENST00000566082 CEP57L1Q8IYX8 460 aa12.43□□□□□ -0.42
USB1-212ENST00000566082 CHMP4CQ96CF2 233 aa12.43□□□□□ -0.42
USB1-212ENST00000566082 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.43□□□□□ -0.42
USB1-212ENST00000566082 V9GYY5 206 aaPredicted RBP12.43□□□□□ -0.42
USB1-212ENST00000566082 ABCC4O15439 1325 aa12.43□□□□□ -0.42
USB1-212ENST00000566082 CFAP65Q6ZU64 1925 aaKnown RBP12.43□□□□□ -0.42
USB1-212ENST00000566082 ATP8B2P98198 1209 aa12.43□□□□□ -0.42
USB1-212ENST00000566082 ANO6Q4KMQ2 910 aa12.43□□□□□ -0.42
USB1-212ENST00000566082 FAM200AQ8TCP9 573 aa12.43□□□□□ -0.42
USB1-212ENST00000566082 NSFL1CQ9UNZ2 370 aaKnown RBP12.43□□□□□ -0.42
USB1-212ENST00000566082 GUCY1B3Q02153 619 aa12.42□□□□□ -0.42
USB1-212ENST00000566082 GPS2Q13227 327 aa12.42□□□□□ -0.42
USB1-212ENST00000566082 MYRIPQ8NFW9 859 aa12.42□□□□□ -0.42
USB1-212ENST00000566082 PIBF1Q8WXW3 757 aa12.42□□□□□ -0.42
USB1-212ENST00000566082 CCDC34Q96HJ3 373 aa12.42□□□□□ -0.42
USB1-212ENST00000566082 ZNF396Q96N95 335 aaPredicted RBP12.42□□□□□ -0.42
USB1-212ENST00000566082 FAM69CQ0P6D2 419 aa12.42□□□□□ -0.42
USB1-212ENST00000566082 FAM173BQ6P4H8 233 aa12.42□□□□□ -0.42
USB1-212ENST00000566082 ZNF530Q6P9A1 599 aaPredicted RBP12.42□□□□□ -0.42
USB1-212ENST00000566082 PHF23Q9BUL5 403 aaPredicted RBP12.42□□□□□ -0.42
USB1-212ENST00000566082 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
USB1-212ENST00000566082 RALYLQ86SE5 291 aaKnown RBP12.42□□□□□ -0.42
USB1-212ENST00000566082 LUZP1Q86V48 1076 aa12.42□□□□□ -0.42
USB1-212ENST00000566082 TTC5Q8N0Z6 440 aa12.42□□□□□ -0.42
USB1-212ENST00000566082 ECHDC1Q9NTX5 307 aa12.42□□□□□ -0.42
USB1-212ENST00000566082 CD109Q6YHK3 1445 aa12.41□□□□□ -0.42
USB1-212ENST00000566082 SBNO2Q9Y2G9 1366 aa12.41□□□□□ -0.42
USB1-212ENST00000566082 PSME1Q06323 249 aa12.41□□□□□ -0.42
USB1-212ENST00000566082 UGGT1Q9NYU2 1555 aa12.41□□□□□ -0.42
USB1-212ENST00000566082 PI4KAP2A4QPH2 592 aa12.41□□□□□ -0.42
USB1-212ENST00000566082 IL13P35225 146 aa12.41□□□□□ -0.42
USB1-212ENST00000566082 TRIM29Q14134 588 aa12.41□□□□□ -0.42
USB1-212ENST00000566082 SMAP1Q8IYB5 467 aaPredicted RBP12.41□□□□□ -0.42
USB1-212ENST00000566082 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
USB1-212ENST00000566082 PI4KAP1Q8N8J0 262 aa12.41□□□□□ -0.42
USB1-212ENST00000566082 TRERF1Q96PN7 1200 aa12.41□□□□□ -0.42
USB1-212ENST00000566082 DDX19AQ9NUU7 478 aaKnown RBP12.41□□□□□ -0.42
USB1-212ENST00000566082 SERPINC1P01008 464 aa12.41□□□□□ -0.42
USB1-212ENST00000566082 KIF18AQ8NI77 898 aa12.41□□□□□ -0.42
USB1-212ENST00000566082 DNAAF4Q8WXU2 420 aa12.41□□□□□ -0.42
USB1-212ENST00000566082 MYL6BP14649 208 aa12.4□□□□□ -0.42
USB1-212ENST00000566082 TRDNQ13061 729 aa12.4□□□□□ -0.42
USB1-212ENST00000566082 DNAJC25Q9H1X3 360 aa12.4□□□□□ -0.42
USB1-212ENST00000566082 ABCA8O94911 1581 aa12.4□□□□□ -0.42
USB1-212ENST00000566082 PNMA6EA0A0J9YXQ4 647 aa12.4□□□□□ -0.42
USB1-212ENST00000566082 TYRO3Q06418 890 aa12.4□□□□□ -0.42
USB1-212ENST00000566082 STK11IPQ8N1F8 1099 aa12.4□□□□□ -0.42
USB1-212ENST00000566082 KIF2CQ99661 725 aa12.4□□□□□ -0.42
USB1-212ENST00000566082 RIOK3O14730 519 aaKnown RBP12.4□□□□□ -0.42
USB1-212ENST00000566082 ATP2B1P20020 1258 aa12.4□□□□□ -0.42
USB1-212ENST00000566082 BTBD11A6QL63 1104 aa12.39□□□□□ -0.43
USB1-212ENST00000566082 U2AF2P26368 475 aaKnown RBP eCLIP12.39□□□□□ -0.43
USB1-212ENST00000566082 TTLL5Q6EMB2 1281 aa12.39□□□□□ -0.43
USB1-212ENST00000566082 MTHFSDQ2M296 383 aaKnown RBP12.39□□□□□ -0.43
USB1-212ENST00000566082 RIMS2Q9UQ26 1411 aa12.39□□□□□ -0.43
USB1-212ENST00000566082 CEP135Q66GS9 1140 aa12.39□□□□□ -0.43
USB1-212ENST00000566082 OLFM4Q6UX06 510 aa12.39□□□□□ -0.43
USB1-212ENST00000566082 NFXL1Q6ZNB6 911 aa12.39□□□□□ -0.43
USB1-212ENST00000566082 RASSF8Q8NHQ8 419 aa12.39□□□□□ -0.43
USB1-212ENST00000566082 UBXN4Q92575 508 aa12.38□□□□□ -0.43
USB1-212ENST00000566082 RBM8AQ9Y5S9 174 aaKnown RBP12.38□□□□□ -0.43
USB1-212ENST00000566082 IBTKQ9P2D0 1353 aaPredicted RBP12.38□□□□□ -0.43
USB1-212ENST00000566082 SFPQP23246 707 aaKnown RBP eCLIP12.38□□□□□ -0.43
USB1-212ENST00000566082 KRT32Q14532 448 aa12.38□□□□□ -0.43
USB1-212ENST00000566082 TULP1O00294 542 aaPredicted RBP12.38□□□□□ -0.43
USB1-212ENST00000566082 TTC37Q6PGP7 1564 aa12.38□□□□□ -0.43
USB1-212ENST00000566082 ZFYVE9O95405 1425 aa12.38□□□□□ -0.43
USB1-212ENST00000566082 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.38□□□□□ -0.43
USB1-212ENST00000566082 CDC42BPAQ5VT25 1732 aa12.38□□□□□ -0.43
USB1-212ENST00000566082 PDIA4P13667 645 aaKnown RBP12.37□□□□□ -0.43
USB1-212ENST00000566082 CCT2P78371 535 aaKnown RBP12.37□□□□□ -0.43
USB1-212ENST00000566082 ACEP12821 1306 aa12.37□□□□□ -0.43
USB1-212ENST00000566082 BIN1O00499 593 aa12.37□□□□□ -0.43
USB1-212ENST00000566082 CHL1O00533 1208 aa12.37□□□□□ -0.43
USB1-212ENST00000566082 LRRFIP1Q32MZ4 808 aaKnown RBP12.37□□□□□ -0.43
USB1-212ENST00000566082 PLEKHO1Q53GL0 409 aaPredicted RBP12.37□□□□□ -0.43
USB1-212ENST00000566082 LRRC2Q9BYS8 371 aa12.37□□□□□ -0.43
USB1-212ENST00000566082 ANO10Q9NW15 660 aa12.37□□□□□ -0.43
USB1-212ENST00000566082 RTL1A6NKG5 1358 aa12.37□□□□□ -0.43
USB1-212ENST00000566082 EVI5LQ96CN4 794 aa12.37□□□□□ -0.43
USB1-212ENST00000566082 BCL2L12Q9HB09 334 aa12.37□□□□□ -0.43
USB1-212ENST00000566082 TPM1P09493 284 aa12.37□□□□□ -0.43
USB1-212ENST00000566082 SKILP12757 684 aa12.37□□□□□ -0.43
USB1-212ENST00000566082 FSIP1Q8NA03 581 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 792.1 ms