RNA–Protein interactions for RNA: ENST00000565958.1

CCNDBP1-207, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-207ENST00000565958 SLFNL1Q499Z3 407 aa8.44□□□□□ -1.06
CCNDBP1-207ENST00000565958 KRTAP9-6A0A140TA67 174 aa8.43□□□□□ -1.06
CCNDBP1-207ENST00000565958 MCCD1P59942 119 aaPredicted RBP8.43□□□□□ -1.06
CCNDBP1-207ENST00000565958 SNRPNP63162 240 aaKnown RBP8.43□□□□□ -1.06
CCNDBP1-207ENST00000565958 CRTC2Q53ET0 693 aaPredicted RBP8.43□□□□□ -1.06
CCNDBP1-207ENST00000565958 LARP1Q6PKG0 1096 aaKnown RBP8.43□□□□□ -1.06
CCNDBP1-207ENST00000565958 MKRN1Q9UHC7 482 aaKnown RBP8.43□□□□□ -1.06
CCNDBP1-207ENST00000565958 E9PSI1 815 aa8.42□□□□□ -1.06
CCNDBP1-207ENST00000565958 ATP5J2-PTCD1G3V325 749 aa8.42□□□□□ -1.06
CCNDBP1-207ENST00000565958 MAP2K3P46734 347 aa8.42□□□□□ -1.06
CCNDBP1-207ENST00000565958 NCOA4Q13772 614 aa8.42□□□□□ -1.06
CCNDBP1-207ENST00000565958 RNF135Q8IUD6 432 aa8.42□□□□□ -1.06
CCNDBP1-207ENST00000565958 OXCT2Q9BYC2 517 aaPredicted RBP8.42□□□□□ -1.06
CCNDBP1-207ENST00000565958 CEP126Q9P2H0 1117 aa8.42□□□□□ -1.06
CCNDBP1-207ENST00000565958 PCDHB9Q9Y5E1 797 aa8.42□□□□□ -1.06
CCNDBP1-207ENST00000565958 RASA1P20936 1047 aa8.41□□□□□ -1.06
CCNDBP1-207ENST00000565958 TXNDC2Q86VQ3 553 aa8.41□□□□□ -1.06
CCNDBP1-207ENST00000565958 DZIP3Q86Y13 1208 aaKnown RBP8.41□□□□□ -1.06
CCNDBP1-207ENST00000565958 GAS2L1Q99501 681 aaPredicted RBP8.41□□□□□ -1.06
CCNDBP1-207ENST00000565958 ESPNB1AK53 854 aa8.4□□□□□ -1.06
CCNDBP1-207ENST00000565958 LZTS3O60299 673 aaPredicted RBP8.4□□□□□ -1.06
CCNDBP1-207ENST00000565958 PTK7Q13308 1070 aa8.4□□□□□ -1.06
CCNDBP1-207ENST00000565958 PHLDB3Q6NSJ2 640 aa8.4□□□□□ -1.06
CCNDBP1-207ENST00000565958 PLPP7Q8NBV4 271 aa8.4□□□□□ -1.06
CCNDBP1-207ENST00000565958 FAM200AQ8TCP9 573 aa8.4□□□□□ -1.06
CCNDBP1-207ENST00000565958 COL8A1P27658 744 aa8.39□□□□□ -1.07
CCNDBP1-207ENST00000565958 SSFA2P28290 1259 aa8.39□□□□□ -1.07
CCNDBP1-207ENST00000565958 SEPT12Q8IYM1 358 aa8.39□□□□□ -1.07
CCNDBP1-207ENST00000565958 CYLDQ9NQC7 956 aa8.39□□□□□ -1.07
CCNDBP1-207ENST00000565958 MEN1O00255 615 aa8.38□□□□□ -1.07
CCNDBP1-207ENST00000565958 ARID4AP29374 1257 aaPredicted RBP8.38□□□□□ -1.07
CCNDBP1-207ENST00000565958 MAP7D1Q3KQU3 841 aa8.38□□□□□ -1.07
CCNDBP1-207ENST00000565958 PHTF2Q8N3S3 785 aa8.38□□□□□ -1.07
CCNDBP1-207ENST00000565958 CLP1Q92989 425 aaKnown RBP8.38□□□□□ -1.07
CCNDBP1-207ENST00000565958 CDCA7Q9BWT1 371 aaPredicted RBP8.38□□□□□ -1.07
CCNDBP1-207ENST00000565958 SHISA8B8ZZ34 492 aa8.37□□□□□ -1.07
CCNDBP1-207ENST00000565958 FAM69CQ0P6D2 419 aa8.37□□□□□ -1.07
CCNDBP1-207ENST00000565958 POU4F2Q12837 409 aa8.37□□□□□ -1.07
CCNDBP1-207ENST00000565958 EML3Q32P44 896 aa8.37□□□□□ -1.07
CCNDBP1-207ENST00000565958 ANKMY2Q8IV38 441 aa8.37□□□□□ -1.07
CCNDBP1-207ENST00000565958 CFHR5Q9BXR6 569 aa8.37□□□□□ -1.07
CCNDBP1-207ENST00000565958 NUCKS1Q9H1E3 243 aaKnown RBP8.37□□□□□ -1.07
CCNDBP1-207ENST00000565958 RRAGCQ9HB90 399 aa8.37□□□□□ -1.07
CCNDBP1-207ENST00000565958 SLAIN2Q9P270 581 aa8.37□□□□□ -1.07
CCNDBP1-207ENST00000565958 WDR44Q5JSH3 913 aa8.36□□□□□ -1.07
CCNDBP1-207ENST00000565958 SLC27A3Q5K4L6 730 aa8.36□□□□□ -1.07
CCNDBP1-207ENST00000565958 TRIM50Q86XT4 487 aa8.36□□□□□ -1.07
CCNDBP1-207ENST00000565958 GDF2Q9UK05 429 aaPredicted RBP8.36□□□□□ -1.07
CCNDBP1-207ENST00000565958 CHIC2Q9UKJ5 165 aa8.36□□□□□ -1.07
CCNDBP1-207ENST00000565958 PIK3R2O00459 728 aa8.35□□□□□ -1.07
CCNDBP1-207ENST00000565958 ATP2B4P23634 1241 aa8.35□□□□□ -1.07
CCNDBP1-207ENST00000565958 SWI5Q1ZZU3 235 aa8.35□□□□□ -1.07
CCNDBP1-207ENST00000565958 NBPF10Q6P3W6 841 aaKnown RBP8.35□□□□□ -1.07
CCNDBP1-207ENST00000565958 OGFOD1Q8N543 542 aa8.35□□□□□ -1.07
CCNDBP1-207ENST00000565958 NBPF15Q8N660 670 aa8.35□□□□□ -1.07
CCNDBP1-207ENST00000565958 A0A1W2PRU2 124 aa8.34□□□□□ -1.07
CCNDBP1-207ENST00000565958 F11P03951 625 aa8.34□□□□□ -1.07
CCNDBP1-207ENST00000565958 ATP1A2P50993 1020 aa8.34□□□□□ -1.07
CCNDBP1-207ENST00000565958 DPYDQ12882 1025 aa8.34□□□□□ -1.07
CCNDBP1-207ENST00000565958 GRIN2CQ14957 1233 aa8.34□□□□□ -1.07
CCNDBP1-207ENST00000565958 EDARADDQ8WWZ3 215 aa8.34□□□□□ -1.07
CCNDBP1-207ENST00000565958 KLRG1Q96E93 195 aa8.34□□□□□ -1.07
CCNDBP1-207ENST00000565958 ZNF594Q96JF6 807 aaPredicted RBP8.34□□□□□ -1.07
CCNDBP1-207ENST00000565958 NLRP3Q96P20 1036 aa8.34□□□□□ -1.07
CCNDBP1-207ENST00000565958 DNAAF2Q9NVR5 837 aaKnown RBP8.34□□□□□ -1.07
CCNDBP1-207ENST00000565958 CLDN10P78369 228 aa8.33□□□□□ -1.08
CCNDBP1-207ENST00000565958 C1orf229Q6ZS94 237 aaPredicted RBP8.33□□□□□ -1.08
CCNDBP1-207ENST00000565958 GRIP2Q9C0E4 1043 aa8.33□□□□□ -1.08
CCNDBP1-207ENST00000565958 TIMMDC1Q9NPL8 285 aa8.33□□□□□ -1.08
CCNDBP1-207ENST00000565958 DOLKQ9UPQ8 538 aa8.33□□□□□ -1.08
CCNDBP1-207ENST00000565958 PHF24Q9UPV7 400 aa8.33□□□□□ -1.08
CCNDBP1-207ENST00000565958 NOD1Q9Y239 953 aa8.33□□□□□ -1.08
CCNDBP1-207ENST00000565958 SOWAHDA6NJG2 315 aa8.32□□□□□ -1.08
CCNDBP1-207ENST00000565958 C1QTNF9BB2RNN3 333 aa8.32□□□□□ -1.08
CCNDBP1-207ENST00000565958 SPATA31C2B4DYI2 1134 aa8.32□□□□□ -1.08
CCNDBP1-207ENST00000565958 LINC00114Q6XXX2 140 aa8.32□□□□□ -1.08
CCNDBP1-207ENST00000565958 KRTAP1-3Q8IUG1 177 aa8.32□□□□□ -1.08
CCNDBP1-207ENST00000565958 GOLGA6L1Q8N7Z2 621 aa8.32□□□□□ -1.08
CCNDBP1-207ENST00000565958 ERCC3P19447 782 aa8.31□□□□□ -1.08
CCNDBP1-207ENST00000565958 SERPINB4P48594 390 aa8.31□□□□□ -1.08
CCNDBP1-207ENST00000565958 CCDC125Q86Z20 511 aa8.31□□□□□ -1.08
CCNDBP1-207ENST00000565958 LARGE2Q8N3Y3 721 aa8.31□□□□□ -1.08
CCNDBP1-207ENST00000565958 RBM47A0AV96 593 aaKnown RBP8.3□□□□□ -1.08
CCNDBP1-207ENST00000565958 DNAJC14Q6Y2X3 702 aaPredicted RBP8.3□□□□□ -1.08
CCNDBP1-207ENST00000565958 TAS1R3Q7RTX0 852 aa8.3□□□□□ -1.08
CCNDBP1-207ENST00000565958 CD163Q86VB7 1156 aa8.3□□□□□ -1.08
CCNDBP1-207ENST00000565958 SIX5Q8N196 739 aa8.3□□□□□ -1.08
CCNDBP1-207ENST00000565958 SUV39H2Q9H5I1 410 aa8.3□□□□□ -1.08
CCNDBP1-207ENST00000565958 WASLO00401 505 aaPredicted RBP8.29□□□□□ -1.08
CCNDBP1-207ENST00000565958 GNB5O14775 395 aa8.29□□□□□ -1.08
CCNDBP1-207ENST00000565958 AMPD1P23109 780 aa8.29□□□□□ -1.08
CCNDBP1-207ENST00000565958 CLN3Q13286 438 aa8.29□□□□□ -1.08
CCNDBP1-207ENST00000565958 C1orf216Q8TAB5 229 aa8.29□□□□□ -1.08
CCNDBP1-207ENST00000565958 CCDC85AQ96PX6 553 aaPredicted RBP8.29□□□□□ -1.08
CCNDBP1-207ENST00000565958 RBM19Q9Y4C8 960 aaKnown RBP8.29□□□□□ -1.08
CCNDBP1-207ENST00000565958 GTF2IP78347 998 aa8.28□□□□□ -1.08
CCNDBP1-207ENST00000565958 TSGA10IPQ3SY00 556 aa8.28□□□□□ -1.08
CCNDBP1-207ENST00000565958 OXLD1Q5BKU9 147 aa8.28□□□□□ -1.08
CCNDBP1-207ENST00000565958 SEMA6BQ9H3T3 888 aa8.28□□□□□ -1.08
CCNDBP1-207ENST00000565958 KIAA1024Q9UPX6 916 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms