RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 SIK1P57059 783 aa16.55■□□□□ 0.24
CFDP1-205ENST00000565646 C8orf58Q8NAV2 365 aa16.55■□□□□ 0.24
CFDP1-205ENST00000565646 FMNL2Q96PY5 1086 aa16.55■□□□□ 0.24
CFDP1-205ENST00000565646 LAMB4A4D0S4 1761 aa16.55■□□□□ 0.24
CFDP1-205ENST00000565646 MYH14Q7Z406 1995 aaKnown RBP16.55■□□□□ 0.24
CFDP1-205ENST00000565646 PRAMEF22A3QJZ6 481 aa16.54■□□□□ 0.24
CFDP1-205ENST00000565646 TSPYL6Q8N831 410 aa16.54■□□□□ 0.24
CFDP1-205ENST00000565646 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
CFDP1-205ENST00000565646 GIGYF1O75420 1035 aaPredicted RBP16.53■□□□□ 0.24
CFDP1-205ENST00000565646 KCNQ4P56696 695 aa16.53■□□□□ 0.24
CFDP1-205ENST00000565646 EXOSC9Q06265 439 aaKnown RBP16.53■□□□□ 0.24
CFDP1-205ENST00000565646 LRRC4BQ9NT99 713 aa16.53■□□□□ 0.24
CFDP1-205ENST00000565646 ITPK1Q13572 414 aa16.52■□□□□ 0.24
CFDP1-205ENST00000565646 VSIG10Q8N0Z9 540 aa16.52■□□□□ 0.24
CFDP1-205ENST00000565646 UTRNP46939 3433 aa16.52■□□□□ 0.23
CFDP1-205ENST00000565646 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
CFDP1-205ENST00000565646 ELL2O00472 640 aaPredicted RBP16.5■□□□□ 0.23
CFDP1-205ENST00000565646 SNRPA1P09661 255 aaKnown RBP16.5■□□□□ 0.23
CFDP1-205ENST00000565646 GPR162Q16538 588 aa16.5■□□□□ 0.23
CFDP1-205ENST00000565646 DNAJC10Q8IXB1 793 aa16.5■□□□□ 0.23
CFDP1-205ENST00000565646 KLHL34Q8N239 644 aa16.5■□□□□ 0.23
CFDP1-205ENST00000565646 CCNL1Q9UK58 526 aaPredicted RBP16.5■□□□□ 0.23
CFDP1-205ENST00000565646 USP16Q9Y5T5 823 aa16.5■□□□□ 0.23
CFDP1-205ENST00000565646 QSER1Q2KHR3 1735 aa16.5■□□□□ 0.23
CFDP1-205ENST00000565646 ATP6V1AP38606 617 aa16.49■□□□□ 0.23
CFDP1-205ENST00000565646 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
CFDP1-205ENST00000565646 CACNA1FO60840 1977 aa16.49■□□□□ 0.23
CFDP1-205ENST00000565646 TUBGCP6Q96RT7 1819 aa16.48■□□□□ 0.23
CFDP1-205ENST00000565646 VAMP4O75379 141 aa16.48■□□□□ 0.23
CFDP1-205ENST00000565646 HOXB7P09629 217 aa16.48■□□□□ 0.23
CFDP1-205ENST00000565646 TWISTNBQ3B726 338 aaPredicted RBP16.48■□□□□ 0.23
CFDP1-205ENST00000565646 SLC27A3Q5K4L6 730 aa16.48■□□□□ 0.23
CFDP1-205ENST00000565646 SLC16A10Q8TF71 515 aa16.48■□□□□ 0.23
CFDP1-205ENST00000565646 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
CFDP1-205ENST00000565646 CYP19A1P11511 503 aaPredicted RBP16.47■□□□□ 0.23
CFDP1-205ENST00000565646 C1QTNF8P60827 252 aa16.47■□□□□ 0.23
CFDP1-205ENST00000565646 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
CFDP1-205ENST00000565646 SOS1Q07889 1333 aaPredicted RBP16.46■□□□□ 0.23
CFDP1-205ENST00000565646 UBR3Q6ZT12 1888 aa16.46■□□□□ 0.23
CFDP1-205ENST00000565646 POLD1P28340 1107 aa16.46■□□□□ 0.23
CFDP1-205ENST00000565646 COL24A1Q17RW2 1714 aa16.45■□□□□ 0.22
CFDP1-205ENST00000565646 PELP1Q8IZL8 1130 aaKnown RBP16.45■□□□□ 0.22
CFDP1-205ENST00000565646 TEX13AQ9BXU3 409 aaPredicted RBP16.45■□□□□ 0.22
CFDP1-205ENST00000565646 TFCP2L1Q9NZI6 479 aa16.45■□□□□ 0.22
CFDP1-205ENST00000565646 A1BGP04217 495 aa16.44■□□□□ 0.22
CFDP1-205ENST00000565646 EIF2S2P20042 333 aaKnown RBP16.44■□□□□ 0.22
CFDP1-205ENST00000565646 CRKLP46109 303 aaKnown RBP16.44■□□□□ 0.22
CFDP1-205ENST00000565646 INTS5Q6P9B9 1019 aaKnown RBP16.44■□□□□ 0.22
CFDP1-205ENST00000565646 NECTIN2Q92692 538 aa16.44■□□□□ 0.22
CFDP1-205ENST00000565646 PNPLA7Q6ZV29 1317 aa16.44■□□□□ 0.22
CFDP1-205ENST00000565646 NBPF26B4DH59 902 aa16.43■□□□□ 0.22
CFDP1-205ENST00000565646 STARD3NLO95772 234 aa16.43■□□□□ 0.22
CFDP1-205ENST00000565646 CT47B1P0C2W7 299 aaPredicted RBP16.43■□□□□ 0.22
CFDP1-205ENST00000565646 HDGFL1Q5TGJ6 251 aa16.43■□□□□ 0.22
CFDP1-205ENST00000565646 NBPF10Q6P3W6 841 aaKnown RBP16.43■□□□□ 0.22
CFDP1-205ENST00000565646 NBPF15Q8N660 670 aa16.43■□□□□ 0.22
CFDP1-205ENST00000565646 CNTNAP4Q9C0A0 1308 aa16.43■□□□□ 0.22
CFDP1-205ENST00000565646 PIP4K2AP48426 406 aaPredicted RBP16.42■□□□□ 0.22
CFDP1-205ENST00000565646 PDIA6Q15084 440 aa16.42■□□□□ 0.22
CFDP1-205ENST00000565646 PROSER3Q2NL68 480 aa16.42■□□□□ 0.22
CFDP1-205ENST00000565646 RC3H1Q5TC82 1133 aaKnown RBP16.42■□□□□ 0.22
CFDP1-205ENST00000565646 LRP10Q7Z4F1 713 aa16.42■□□□□ 0.22
CFDP1-205ENST00000565646 CCDC87Q9NVE4 849 aa16.42■□□□□ 0.22
CFDP1-205ENST00000565646 ZBTB1Q9Y2K1 713 aa16.42■□□□□ 0.22
CFDP1-205ENST00000565646 TCERG1O14776 1098 aaKnown RBP16.41■□□□□ 0.22
CFDP1-205ENST00000565646 AMIGO3Q86WK7 504 aa16.41■□□□□ 0.22
CFDP1-205ENST00000565646 CHPF2Q9P2E5 772 aa16.41■□□□□ 0.22
CFDP1-205ENST00000565646 MSH5O43196 834 aa16.4■□□□□ 0.22
CFDP1-205ENST00000565646 ANXA1P04083 346 aa16.4■□□□□ 0.22
CFDP1-205ENST00000565646 RARSP54136 660 aaKnown RBP16.4■□□□□ 0.22
CFDP1-205ENST00000565646 CCDC30Q5VVM6 783 aa16.4■□□□□ 0.22
CFDP1-205ENST00000565646 ERBB4Q15303 1308 aa16.4■□□□□ 0.22
CFDP1-205ENST00000565646 SMIM5Q71RC9 77 aa16.39■□□□□ 0.21
CFDP1-205ENST00000565646 NLGN2Q8NFZ4 835 aa16.39■□□□□ 0.21
CFDP1-205ENST00000565646 SSH1Q8WYL5 1049 aa16.39■□□□□ 0.21
CFDP1-205ENST00000565646 ZNF428Q96B54 188 aa16.39■□□□□ 0.21
CFDP1-205ENST00000565646 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.21
CFDP1-205ENST00000565646 C4AP0C0L4 1744 aa16.39■□□□□ 0.21
CFDP1-205ENST00000565646 RPS6KA4O75676 772 aa16.38■□□□□ 0.21
CFDP1-205ENST00000565646 CANXP27824 592 aaKnown RBP16.38■□□□□ 0.21
CFDP1-205ENST00000565646 EIF5P55010 431 aaKnown RBP16.38■□□□□ 0.21
CFDP1-205ENST00000565646 DBF4Q9UBU7 674 aaPredicted RBP16.38■□□□□ 0.21
CFDP1-205ENST00000565646 GNPATO15228 680 aa16.37■□□□□ 0.21
CFDP1-205ENST00000565646 ALDH1L2Q3SY69 923 aa16.37■□□□□ 0.21
CFDP1-205ENST00000565646 CHMP4AQ9BY43 222 aa16.37■□□□□ 0.21
CFDP1-205ENST00000565646 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
CFDP1-205ENST00000565646 MYL6BP14649 208 aa16.36■□□□□ 0.21
CFDP1-205ENST00000565646 HMGB2P26583 209 aaKnown RBP16.36■□□□□ 0.21
CFDP1-205ENST00000565646 IL6STP40189 918 aaPredicted RBP16.36■□□□□ 0.21
CFDP1-205ENST00000565646 G2E3Q7L622 706 aa16.36■□□□□ 0.21
CFDP1-205ENST00000565646 MRPL50Q8N5N7 158 aaKnown RBP16.36■□□□□ 0.21
CFDP1-205ENST00000565646 AK7Q96M32 723 aa16.36■□□□□ 0.21
CFDP1-205ENST00000565646 BCL2L13Q9BXK5 485 aa16.36■□□□□ 0.21
CFDP1-205ENST00000565646 BCAR3O75815 825 aa16.35■□□□□ 0.21
CFDP1-205ENST00000565646 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
CFDP1-205ENST00000565646 STK31Q9BXU1 1019 aa16.35■□□□□ 0.21
CFDP1-205ENST00000565646 PHAXQ9H814 394 aaKnown RBP16.35■□□□□ 0.21
CFDP1-205ENST00000565646 HYPKQ9NX55 129 aa16.35■□□□□ 0.21
CFDP1-205ENST00000565646 RCAN3Q9UKA8 241 aa16.35■□□□□ 0.21
CFDP1-205ENST00000565646 BCORQ6W2J9 1755 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms